| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yjjX [C]
Identifier: 160876781
GI number: 160876781
Start: 4338861
End: 4339421
Strand: Direct
Name: yjjX [C]
Synonym: Sbal195_3676
Alternate gene names: 160876781
Gene position: 4338861-4339421 (Clockwise)
Preceding gene: 160876779
Following gene: 160876782
Centisome position: 81.14
GC content: 47.59
Gene sequence:
>561_bases ATGCAACAAAAAATTATCAAGATAAAAGTGGGTTCTAAAAACCCAGTAAAAATCAACGCGGCAACCAAAGCGATGGCACA ACTGTTCCCCGAAAGCATTATAGACGCCAGCGGTATGGATGCACCTTCAGGTGTTGCGGCGCAGCCAATGACAGATAAAG ACACTCGCCAAGGGGCGATTAATCGGGTGCACTACTGTCAACAACAGGATCAACAAGATACTCAAGCCGACTACTATTTT GCGATGGAAGGCGGTGTCGATTGTTTCGACTTTGGCCCAGCCACATTCGCCTATATCGCCATTGGGCATAAAGACCAACT TGCCATTGGCCGCAGCGCAATTTTGCCTCTGCCAATGCAGGTTTATCGGGCATTAGAAGCAGGTGAAGAACTCGGGCATG TGATGGATAGATTGTTCAATACTGTCAATATCAAACAAAAAGGCGGTGCCATAGGTTTGCTCACCCACGGCCACGCGACC CGTGAAAGTAATTACACCCAAGCGATTATTCTCGCCATGGCGCCGCTATTAAATCCCGATATTTACGCACAAACTTGTTA G
Upstream 100 bases:
>100_bases ACTGTGGCAGAATAGAAAACCCAAACGCTTAGACACCTCAGACCATTTAAGCAATGATTCAAACGAGCGTCCACATTAAA AGCTGAAATAAACAACTTAT
Downstream 100 bases:
>100_bases TAACATGTTGCAAGCACAGTTGAAGCCCGCTAACTTAGTTGTGACATGCAACCAAACCCATTCGACTATGGCTCAAACAG ACGCACCATCGACTCCAGCT
Product: NTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MQQKIIKIKVGSKNPVKINAATKAMAQLFPESIIDASGMDAPSGVAAQPMTDKDTRQGAINRVHYCQQQDQQDTQADYYF AMEGGVDCFDFGPATFAYIAIGHKDQLAIGRSAILPLPMQVYRALEAGEELGHVMDRLFNTVNIKQKGGAIGLLTHGHAT RESNYTQAIILAMAPLLNPDIYAQTC
Sequences:
>Translated_186_residues MQQKIIKIKVGSKNPVKINAATKAMAQLFPESIIDASGMDAPSGVAAQPMTDKDTRQGAINRVHYCQQQDQQDTQADYYF AMEGGVDCFDFGPATFAYIAIGHKDQLAIGRSAILPLPMQVYRALEAGEELGHVMDRLFNTVNIKQKGGAIGLLTHGHAT RESNYTQAIILAMAPLLNPDIYAQTC >Mature_186_residues MQQKIIKIKVGSKNPVKINAATKAMAQLFPESIIDASGMDAPSGVAAQPMTDKDTRQGAINRVHYCQQQDQQDTQADYYF AMEGGVDCFDFGPATFAYIAIGHKDQLAIGRSAILPLPMQVYRALEAGEELGHVMDRLFNTVNIKQKGGAIGLLTHGHAT RESNYTQAIILAMAPLLNPDIYAQTC
Specific function: Unknown
COG id: COG1986
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0244 family [H]
Homologues:
Organism=Escherichia coli, GI87082442, Length=172, Percent_Identity=37.2093023255814, Blast_Score=110, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002786 [H]
Pfam domain/function: PF01931 DUF84 [H]
EC number: NA
Molecular weight: Translated: 20242; Mature: 20242
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQKIIKIKVGSKNPVKINAATKAMAQLFPESIIDASGMDAPSGVAAQPMTDKDTRQGAI CCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH NRVHYCQQQDQQDTQADYYFAMEGGVDCFDFGPATFAYIAIGHKDQLAIGRSAILPLPMQ HHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHH VYRALEAGEELGHVMDRLFNTVNIKQKGGAIGLLTHGHATRESNYTQAIILAMAPLLNPD HHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC IYAQTC CEEECC >Mature Secondary Structure MQQKIIKIKVGSKNPVKINAATKAMAQLFPESIIDASGMDAPSGVAAQPMTDKDTRQGAI CCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH NRVHYCQQQDQQDTQADYYFAMEGGVDCFDFGPATFAYIAIGHKDQLAIGRSAILPLPMQ HHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHH VYRALEAGEELGHVMDRLFNTVNIKQKGGAIGLLTHGHATRESNYTQAIILAMAPLLNPD HHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC IYAQTC CEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA