| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pepA1 [H]
Identifier: 160876743
GI number: 160876743
Start: 4286291
End: 4287823
Strand: Direct
Name: pepA1 [H]
Synonym: Sbal195_3637
Alternate gene names: 160876743
Gene position: 4286291-4287823 (Clockwise)
Preceding gene: 160876742
Following gene: 160876744
Centisome position: 80.16
GC content: 51.14
Gene sequence:
>1533_bases ATGAAAAATAAGCACAAATTTATGTTAAGCGTTATGGCTCTGGCGTGCCTTAACTCTCTCAATGCTAACGCCGAGATTTT TAGTTTTGACACTCGTAGCTCACTGAATTCAGATACATTAGTGCTATTCCAAAGCGCTGATTCTACTACCTATGGGATCG ATTTTTTACCTCAGTCGACCCAAGACCAATTAAACCTAGCGACAGCAGATAACAGCTTTTCCGGTAAGCAAGGTGAAATC CTCGAGATTTTAGTGCCGAGCGAAATCGATGCTAAGCGAGTCTTACTGGTCGGCATTGGCGATGCAAAAACCCTAACGCC CGGTGATATCAATACAATCGGCGGTAATGTTGCTGCCAAACTCGATACGGTTCCCCAAGCTACAGTACGCGTACTCACCC AAGGTTTAACGGCCGCGCCGTTATTTGCCTCAGAGCTGGCCCACGGTATTGAACTGCGCAGTTATCGCTACACTCAGTTC AAGGCGAGTACCCATGCCGAGAAGAACTACCAAATCGCCGTCGATGATTTAAGTGGCAACCAGAAACACCATAAAAATCT GCAAGCGGTTGAAGCAGGTGTGTTTTTAGCCCGCGATCTTACTAACGCGCCCGCGGGCATTATGTATCCCGACAGCTTTG CCAATGAGGCGAGAAAACTCAAATCCCTCGGCGTTAAAGTCACAGTATTAGAAGCCAAAGATATCGAACGCCTACAACTG GGCGCCTTGGCGGCAGTAGGTAAAGGCAGCGAACGCCCACCTAAGTTAGTGGTCGCCCATTGGCCGGGCAGCAAAGATGC GCCAATCGCACTGGTCGGTAAAGGTATCACCTTCGACTCTGGCGGTTACAACATTAAGGCGACGGGCACTTCTATCGCAC GGATGAAGTCAGACATGGCGGGCGCAGCCACTGTGCTTGGCACCATCAAAGCCATGGCACTCCAAAAGGCGCCAGTCAAC GTAGTCGCGATTATGCCGATGGCGGAGAACATGATCTCTGGCCACGCGATGATCCCAGGGGACGTGATTAAAACTGCCCA AGGGCTCACCGTTGAAGTGCTCAATACCGATGCCGAAGGTCGCTTAGTGCTGGCCGATGGTCTCTGGTATGCCAGAGAAA ACTATAAGCCTTCCATCATAGTGGATGTCGCGACCTTAACGGGTTCTAAAGTCGGCGCACTCGGCAGCGTGTATGCGGGA TTGTTTACCGACTCAGAAACCTTGGTTCAGCAGTTAACCTATGCGGGACAACAGGTTGGCGAGAAAGTGTGGCGTCTACC CTTAGATCAAGCCTACGATGATGAGCTTAAATCCACTATCGCGGATCTGAAAAACACCGGAAAAGAAGGCAGCGCAGGCG CTTCCTCTGCGGCCATGTTCTTAAAACGCTTTGCGGGCGAACAGCCTTGGGCACATCTCGATATCGCGGGTAATGCCTTA ACCGCCACCGATACCGCCGTTGTTCCTGCGGGCGCCACAGGTTACGGCGTGCGCTTGCTAAGCACTTGGTTAACTCAACC TAAAGCTAAGTAA
Upstream 100 bases:
>100_bases CTTGGATTTAATATTAATATCAGCAAAATAGCTTAAATTAGTTAACCCTAAGGCTGAGCTTTGATATTCTTCTCACACTC CTATGATATGAGCTGTCACC
Downstream 100 bases:
>100_bases CCTGAGCTCGGGATAAGCAGAGCCGCTGAATAGGCATCTTTTCGGGCCTCTCTGCGTTGCTCTGTCTAACCATAGCTCGC TATGGCGTACGACAGAGCGC
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase 1; LAP 1; Leucyl aminopeptidase 1 [H]
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MKNKHKFMLSVMALACLNSLNANAEIFSFDTRSSLNSDTLVLFQSADSTTYGIDFLPQSTQDQLNLATADNSFSGKQGEI LEILVPSEIDAKRVLLVGIGDAKTLTPGDINTIGGNVAAKLDTVPQATVRVLTQGLTAAPLFASELAHGIELRSYRYTQF KASTHAEKNYQIAVDDLSGNQKHHKNLQAVEAGVFLARDLTNAPAGIMYPDSFANEARKLKSLGVKVTVLEAKDIERLQL GALAAVGKGSERPPKLVVAHWPGSKDAPIALVGKGITFDSGGYNIKATGTSIARMKSDMAGAATVLGTIKAMALQKAPVN VVAIMPMAENMISGHAMIPGDVIKTAQGLTVEVLNTDAEGRLVLADGLWYARENYKPSIIVDVATLTGSKVGALGSVYAG LFTDSETLVQQLTYAGQQVGEKVWRLPLDQAYDDELKSTIADLKNTGKEGSAGASSAAMFLKRFAGEQPWAHLDIAGNAL TATDTAVVPAGATGYGVRLLSTWLTQPKAK
Sequences:
>Translated_510_residues MKNKHKFMLSVMALACLNSLNANAEIFSFDTRSSLNSDTLVLFQSADSTTYGIDFLPQSTQDQLNLATADNSFSGKQGEI LEILVPSEIDAKRVLLVGIGDAKTLTPGDINTIGGNVAAKLDTVPQATVRVLTQGLTAAPLFASELAHGIELRSYRYTQF KASTHAEKNYQIAVDDLSGNQKHHKNLQAVEAGVFLARDLTNAPAGIMYPDSFANEARKLKSLGVKVTVLEAKDIERLQL GALAAVGKGSERPPKLVVAHWPGSKDAPIALVGKGITFDSGGYNIKATGTSIARMKSDMAGAATVLGTIKAMALQKAPVN VVAIMPMAENMISGHAMIPGDVIKTAQGLTVEVLNTDAEGRLVLADGLWYARENYKPSIIVDVATLTGSKVGALGSVYAG LFTDSETLVQQLTYAGQQVGEKVWRLPLDQAYDDELKSTIADLKNTGKEGSAGASSAAMFLKRFAGEQPWAHLDIAGNAL TATDTAVVPAGATGYGVRLLSTWLTQPKAK >Mature_510_residues MKNKHKFMLSVMALACLNSLNANAEIFSFDTRSSLNSDTLVLFQSADSTTYGIDFLPQSTQDQLNLATADNSFSGKQGEI LEILVPSEIDAKRVLLVGIGDAKTLTPGDINTIGGNVAAKLDTVPQATVRVLTQGLTAAPLFASELAHGIELRSYRYTQF KASTHAEKNYQIAVDDLSGNQKHHKNLQAVEAGVFLARDLTNAPAGIMYPDSFANEARKLKSLGVKVTVLEAKDIERLQL GALAAVGKGSERPPKLVVAHWPGSKDAPIALVGKGITFDSGGYNIKATGTSIARMKSDMAGAATVLGTIKAMALQKAPVN VVAIMPMAENMISGHAMIPGDVIKTAQGLTVEVLNTDAEGRLVLADGLWYARENYKPSIIVDVATLTGSKVGALGSVYAG LFTDSETLVQQLTYAGQQVGEKVWRLPLDQAYDDELKSTIADLKNTGKEGSAGASSAAMFLKRFAGEQPWAHLDIAGNAL TATDTAVVPAGATGYGVRLLSTWLTQPKAK
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=336, Percent_Identity=42.2619047619048, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI47155554, Length=317, Percent_Identity=38.1703470031546, Blast_Score=170, Evalue=3e-42, Organism=Escherichia coli, GI1790710, Length=463, Percent_Identity=35.4211663066955, Blast_Score=225, Evalue=5e-60, Organism=Escherichia coli, GI87082123, Length=319, Percent_Identity=43.5736677115987, Blast_Score=200, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17556903, Length=315, Percent_Identity=38.7301587301587, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17565172, Length=339, Percent_Identity=28.6135693215339, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24661038, Length=320, Percent_Identity=35, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI21355725, Length=320, Percent_Identity=35, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24662227, Length=382, Percent_Identity=32.9842931937173, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI161077148, Length=352, Percent_Identity=34.0909090909091, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI20130057, Length=352, Percent_Identity=34.0909090909091, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI20129969, Length=366, Percent_Identity=33.0601092896175, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI21355645, Length=380, Percent_Identity=32.6315789473684, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24662223, Length=380, Percent_Identity=32.6315789473684, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI21357381, Length=316, Percent_Identity=37.0253164556962, Blast_Score=166, Evalue=5e-41, Organism=Drosophila melanogaster, GI221379063, Length=316, Percent_Identity=37.0253164556962, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI221379062, Length=316, Percent_Identity=37.0253164556962, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI20129963, Length=344, Percent_Identity=33.7209302325581, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI19922386, Length=363, Percent_Identity=30.5785123966942, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24646701, Length=258, Percent_Identity=31.7829457364341, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI24646703, Length=258, Percent_Identity=31.7829457364341, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI21358201, Length=258, Percent_Identity=31.7829457364341, Blast_Score=89, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 54005; Mature: 54005
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKHKFMLSVMALACLNSLNANAEIFSFDTRSSLNSDTLVLFQSADSTTYGIDFLPQST CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCC QDQLNLATADNSFSGKQGEILEILVPSEIDAKRVLLVGIGDAKTLTPGDINTIGGNVAAK CCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEE LDTVPQATVRVLTQGLTAAPLFASELAHGIELRSYRYTQFKASTHAEKNYQIAVDDLSGN ECCCCHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCC QKHHKNLQAVEAGVFLARDLTNAPAGIMYPDSFANEARKLKSLGVKVTVLEAKDIERLQL HHHHCCHHHHHHHHHEEHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHH GALAAVGKGSERPPKLVVAHWPGSKDAPIALVGKGITFDSGGYNIKATGTSIARMKSDMA HHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCEEECCCCCEEEECCCHHHHHHHHHH GAATVLGTIKAMALQKAPVNVVAIMPMAENMISGHAMIPGDVIKTAQGLTVEVLNTDAEG HHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCCC RLVLADGLWYARENYKPSIIVDVATLTGSKVGALGSVYAGLFTDSETLVQQLTYAGQQVG CEEEECCEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH EKVWRLPLDQAYDDELKSTIADLKNTGKEGSAGASSAAMFLKRFAGEQPWAHLDIAGNAL HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEE TATDTAVVPAGATGYGVRLLSTWLTQPKAK ECCCCEEECCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKNKHKFMLSVMALACLNSLNANAEIFSFDTRSSLNSDTLVLFQSADSTTYGIDFLPQST CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCC QDQLNLATADNSFSGKQGEILEILVPSEIDAKRVLLVGIGDAKTLTPGDINTIGGNVAAK CCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEE LDTVPQATVRVLTQGLTAAPLFASELAHGIELRSYRYTQFKASTHAEKNYQIAVDDLSGN ECCCCHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCC QKHHKNLQAVEAGVFLARDLTNAPAGIMYPDSFANEARKLKSLGVKVTVLEAKDIERLQL HHHHCCHHHHHHHHHEEHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHH GALAAVGKGSERPPKLVVAHWPGSKDAPIALVGKGITFDSGGYNIKATGTSIARMKSDMA HHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCEEECCCCCEEEECCCHHHHHHHHHH GAATVLGTIKAMALQKAPVNVVAIMPMAENMISGHAMIPGDVIKTAQGLTVEVLNTDAEG HHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCCC RLVLADGLWYARENYKPSIIVDVATLTGSKVGALGSVYAGLFTDSETLVQQLTYAGQQVG CEEEECCEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH EKVWRLPLDQAYDDELKSTIADLKNTGKEGSAGASSAAMFLKRFAGEQPWAHLDIAGNAL HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEE TATDTAVVPAGATGYGVRLLSTWLTQPKAK ECCCCEEECCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]