| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876717
Identifier: 160876717
GI number: 160876717
Start: 4251785
End: 4252219
Strand: Reverse
Name: 160876717
Synonym: Sbal195_3611
Alternate gene names: NA
Gene position: 4252219-4251785 (Counterclockwise)
Preceding gene: 160876718
Following gene: 160876716
Centisome position: 79.52
GC content: 48.97
Gene sequence:
>435_bases ATGAACATTCTGCAAATGTCGGGTTTAGCTATTTTACAGGCAATGGCAAAGGGCGAATTGCCCGCACCTTCGATCACCCA GACTATGCCTATGTCCTTGGTTCAAGCCGAAGAAGGTTCAGTGCTGTTTCATGCGACAGCCGATGATAAGCATCTGAATC CGCTGGGCGGCGTTCATGGTGGTTTCTCTGCCACTGTACTGGACTCTGTTACTGGCTGCGCCGTGCACACTTTGCTCGAA GCGGGTGTGGGTTACGGTACTATCGATTTGAATATTAAAATGATTCGACCTGTGCCTAAGCATCAAGTGTTAGTGGCCGA GGGCAGAGTGATTAATCTGTCTAAGTCCTTAGGAATTTCGGAAGGCACGCTAAAAACGCAGGATGGAAAATTACTGGCTA CCGCCACGGCGACTTGCATGATTTTAAGGCCGTAA
Upstream 100 bases:
>100_bases TGCTTAAGTGGATTGTCAGTCAAATGATCGCCTAACCCTCTGTGGTTAAGCGGTCATTTTTATTAATCTGTAATGGTGTT TATCAATTTAGGGTAGGAAT
Downstream 100 bases:
>100_bases ACCGATTCAATGCGCTCATGCAATCTTATCTGTGCTGCACTTTGCCTTGGCTTTTCCATCACGTGCTGCGGCGATACGGC CTCTTCGATTTTAAGCCATG
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Thioesterase; Aromatic Compounds Catabolic Protein; PaaI Thioesterase; Aromatic Compounds Degradation Protein PaaI; Domain 1 Protein; Protein Involved In Aromatic Compounds Catabolism; Orf_Bo
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MNILQMSGLAILQAMAKGELPAPSITQTMPMSLVQAEEGSVLFHATADDKHLNPLGGVHGGFSATVLDSVTGCAVHTLLE AGVGYGTIDLNIKMIRPVPKHQVLVAEGRVINLSKSLGISEGTLKTQDGKLLATATATCMILRP
Sequences:
>Translated_144_residues MNILQMSGLAILQAMAKGELPAPSITQTMPMSLVQAEEGSVLFHATADDKHLNPLGGVHGGFSATVLDSVTGCAVHTLLE AGVGYGTIDLNIKMIRPVPKHQVLVAEGRVINLSKSLGISEGTLKTQDGKLLATATATCMILRP >Mature_144_residues MNILQMSGLAILQAMAKGELPAPSITQTMPMSLVQAEEGSVLFHATADDKHLNPLGGVHGGFSATVLDSVTGCAVHTLLE AGVGYGTIDLNIKMIRPVPKHQVLVAEGRVINLSKSLGISEGTLKTQDGKLLATATATCMILRP
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15014; Mature: 15014
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILQMSGLAILQAMAKGELPAPSITQTMPMSLVQAEEGSVLFHATADDKHLNPLGGVHG CCEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECCCCCEEEEEECCCCCCCCCCCCCC GFSATVLDSVTGCAVHTLLEAGVGYGTIDLNIKMIRPVPKHQVLVAEGRVINLSKSLGIS CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEEECCEEEEEHHHCCCC EGTLKTQDGKLLATATATCMILRP CCEEECCCCCEEEEEEEEEEEECC >Mature Secondary Structure MNILQMSGLAILQAMAKGELPAPSITQTMPMSLVQAEEGSVLFHATADDKHLNPLGGVHG CCEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECCCCCEEEEEECCCCCCCCCCCCCC GFSATVLDSVTGCAVHTLLEAGVGYGTIDLNIKMIRPVPKHQVLVAEGRVINLSKSLGIS CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEEECCEEEEEHHHCCCC EGTLKTQDGKLLATATATCMILRP CCEEECCCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA