| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cat [H]
Identifier: 160876697
GI number: 160876697
Start: 4225720
End: 4227195
Strand: Reverse
Name: cat [H]
Synonym: Sbal195_3591
Alternate gene names: 160876697
Gene position: 4227195-4225720 (Counterclockwise)
Preceding gene: 160876698
Following gene: 160876695
Centisome position: 79.05
GC content: 47.9
Gene sequence:
>1476_bases ATGAGTCAACAACATCAAACAAGTCAGTACTTAACGAGCCAAAACGGCGCCCCAGTGGCCGACGATCAAAACTCACTGTC GGCGGGTGAACGTGGTCCTTTGCTATTACAGGATTGGCATTTAATTGAAAAGTTAGCCCATTTCAACCGTGAGCGTATCC CTGAGCGTATCGTGCATGCCAAAGGTACTGGCGTTTACGGCACATTTACCCTCACTAAAGATTTAAGCGATTACACCATT GCCGACCATTTCAATGGTGTTGGTAAGCAAACCGAAACCTTTATTCGTTTCTCAACCGTAGGTGGCGAAATGGGTTCAGC CGATGCTGAGCGCGATCCACGCGGTTTTGGTTTGCGTTTCTACACGGCTCGCGGTAATCACGATATTGTGGGTAATAACA CGCCGACCTTTTTCTTACGAGATGGGATTAAGTTTCCAGACTTTATCCATACGCAAAAGCGTAATCCTAAGACAAACTTA AAAGATCCACAGGCTATGTGGGACTTTTGGTCATTGAATCCTGAAGCTATGCATCAAGTGACCATTTTGATGTCGGATCG CGGTATTCCAGCCAACTACCGTCAAATGCACGGTTATGGTTCACATACTTTCTCGCTGTGGAATGCCAAGGGCGAGCGTT TCTGGGTGAAGTTCCACTTTAAATCCCAGCAAGGTGTGGTCAACTTAACCAACGAACAGGCTGATAAATTAAAGGGGATA GATCCCGATTCATCACAGCGCGATATGGTGGTGGCGATCACTGATGGTAATTTCCCGCGTTGGACTGTTAACGTGCAGAT CATGCCTGAGGCAGATGCCAATACTTACCATATCAATCCATTTGATTTAACAAAGGTTTGGCCACATAGTGACTATCCAT TGCTTGAGATTGGGGTGCTAGAACTGAATCGTCTGCCACAAAACTACTTTGCCGAAGTTGAGCAAGTGGCATTGGCGCCG AGCAATTTGGTTCCCGGTATTGGAGCTTCACCCGACAAGATGTTGCAAGCGCGTTTATTTGCCTATGCAGATGCCCAGCG TTACCGCATTGGAGCCAACTACAACCAGTTACCGGTGAACTGCCCACATGCCGCTAAGGCAAATCACCATCAACGTGCGG GCGCTATGGCGGGCACACAATGTCCTTACCATGGTAGCCAAACGGGTGCAGATGCCACGGCAAACTATGGCCCAAACAGC ACTGCGGATGCCTTGGTTGAGCCGGTAAACTTTAGCGAACCACCATTGCGTTTAGAAGGTGAGACGGCGCGTTATAGCCG TTATAACCAAGACGATTATACCCAAGCGGGTAATTTGTATCGCATCTTCTCTGAAGCGGAGAAAGCGCGTTTAGTAGCAA CAATTTCGGGTTCATTAAGTCAAGCGAGTTTAGATGTGCAGCAACGCATGCTGGCACATTTCGAACAAGCCGATGCGGAT TACGGTCAACGTATTAGAACGGCATTAGGGCTATAA
Upstream 100 bases:
>100_bases CCATCGACAACACGTCGCCAGCCAAGGAGATAAACCATGGCCACCATTTACGATTTAATTGAAACCTGGTTAACCAGCAA TCAAGACTAAGGAGCAGGGC
Downstream 100 bases:
>100_bases GCTGCGTTTCTAAGAAGTTAAGCTTCTAAGTCGACACTGTTTATCTCAATAAAACCGTCGTAAGTAGAAAGGCCAGTGAT GTTTATCACTGGCCTTTTTG
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSQQHQTSQYLTSQNGAPVADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERIVHAKGTGVYGTFTLTKDLSDYTI ADHFNGVGKQTETFIRFSTVGGEMGSADAERDPRGFGLRFYTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPKTNL KDPQAMWDFWSLNPEAMHQVTILMSDRGIPANYRQMHGYGSHTFSLWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGI DPDSSQRDMVVAITDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHSDYPLLEIGVLELNRLPQNYFAEVEQVALAP SNLVPGIGASPDKMLQARLFAYADAQRYRIGANYNQLPVNCPHAAKANHHQRAGAMAGTQCPYHGSQTGADATANYGPNS TADALVEPVNFSEPPLRLEGETARYSRYNQDDYTQAGNLYRIFSEAEKARLVATISGSLSQASLDVQQRMLAHFEQADAD YGQRIRTALGL
Sequences:
>Translated_491_residues MSQQHQTSQYLTSQNGAPVADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERIVHAKGTGVYGTFTLTKDLSDYTI ADHFNGVGKQTETFIRFSTVGGEMGSADAERDPRGFGLRFYTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPKTNL KDPQAMWDFWSLNPEAMHQVTILMSDRGIPANYRQMHGYGSHTFSLWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGI DPDSSQRDMVVAITDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHSDYPLLEIGVLELNRLPQNYFAEVEQVALAP SNLVPGIGASPDKMLQARLFAYADAQRYRIGANYNQLPVNCPHAAKANHHQRAGAMAGTQCPYHGSQTGADATANYGPNS TADALVEPVNFSEPPLRLEGETARYSRYNQDDYTQAGNLYRIFSEAEKARLVATISGSLSQASLDVQQRMLAHFEQADAD YGQRIRTALGL >Mature_490_residues SQQHQTSQYLTSQNGAPVADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERIVHAKGTGVYGTFTLTKDLSDYTIA DHFNGVGKQTETFIRFSTVGGEMGSADAERDPRGFGLRFYTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPKTNLK DPQAMWDFWSLNPEAMHQVTILMSDRGIPANYRQMHGYGSHTFSLWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGID PDSSQRDMVVAITDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHSDYPLLEIGVLELNRLPQNYFAEVEQVALAPS NLVPGIGASPDKMLQARLFAYADAQRYRIGANYNQLPVNCPHAAKANHHQRAGAMAGTQCPYHGSQTGADATANYGPNST ADALVEPVNFSEPPLRLEGETARYSRYNQDDYTQAGNLYRIFSEAEKARLVATISGSLSQASLDVQQRMLAHFEQADADY GQRIRTALGL
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=485, Percent_Identity=50.7216494845361, Blast_Score=503, Evalue=1e-142, Organism=Escherichia coli, GI48994891, Length=502, Percent_Identity=40.0398406374502, Blast_Score=345, Evalue=4e-96, Organism=Caenorhabditis elegans, GI71998444, Length=482, Percent_Identity=49.5850622406639, Blast_Score=492, Evalue=1e-139, Organism=Caenorhabditis elegans, GI25147792, Length=482, Percent_Identity=48.3402489626556, Blast_Score=473, Evalue=1e-134, Organism=Caenorhabditis elegans, GI25151141, Length=487, Percent_Identity=47.8439425051335, Blast_Score=473, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6320462, Length=491, Percent_Identity=44.806517311609, Blast_Score=407, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6321525, Length=374, Percent_Identity=45.7219251336898, Blast_Score=352, Evalue=7e-98, Organism=Drosophila melanogaster, GI17981717, Length=484, Percent_Identity=48.7603305785124, Blast_Score=478, Evalue=1e-135, Organism=Drosophila melanogaster, GI19920968, Length=487, Percent_Identity=42.9158110882957, Blast_Score=426, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 54966; Mature: 54835
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQHQTSQYLTSQNGAPVADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERIVHA CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHHC KGTGVYGTFTLTKDLSDYTIADHFNGVGKQTETFIRFSTVGGEMGSADAERDPRGFGLRF CCCCEEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEE YTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPKTNLKDPQAMWDFWSLNPEAMHQV EEECCCCCEECCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHEEE TILMSDRGIPANYRQMHGYGSHTFSLWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGI EEEEECCCCCCCHHHHCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEECCHHHHHHCCC DPDSSQRDMVVAITDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHSDYPLLEIGVL CCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEECCCCCEEECCCCCCCEEEEEHH ELNRLPQNYFAEVEQVALAPSNLVPGIGASPDKMLQARLFAYADAQRYRIGANYNQLPVN HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCC CPHAAKANHHQRAGAMAGTQCPYHGSQTGADATANYGPNSTADALVEPVNFSEPPLRLEG CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECC ETARYSRYNQDDYTQAGNLYRIFSEAEKARLVATISGSLSQASLDVQQRMLAHFEQADAD CCHHHCCCCCCHHHHCCCEEEEHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHH YGQRIRTALGL HHHHHHHHHCC >Mature Secondary Structure SQQHQTSQYLTSQNGAPVADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERIVHA CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHHC KGTGVYGTFTLTKDLSDYTIADHFNGVGKQTETFIRFSTVGGEMGSADAERDPRGFGLRF CCCCEEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEE YTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPKTNLKDPQAMWDFWSLNPEAMHQV EEECCCCCEECCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHEEE TILMSDRGIPANYRQMHGYGSHTFSLWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGI EEEEECCCCCCCHHHHCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEECCHHHHHHCCC DPDSSQRDMVVAITDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHSDYPLLEIGVL CCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEECCCCCEEECCCCCCCEEEEEHH ELNRLPQNYFAEVEQVALAPSNLVPGIGASPDKMLQARLFAYADAQRYRIGANYNQLPVN HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCC CPHAAKANHHQRAGAMAGTQCPYHGSQTGADATANYGPNSTADALVEPVNFSEPPLRLEG CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECC ETARYSRYNQDDYTQAGNLYRIFSEAEKARLVATISGSLSQASLDVQQRMLAHFEQADAD CCHHHCCCCCCHHHHCCCEEEEHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHH YGQRIRTALGL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA