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The map label for this gene is cydA [H]

Identifier: 160876679

GI number: 160876679

Start: 4201714

End: 4203048

Strand: Direct

Name: cydA [H]

Synonym: Sbal195_3573

Alternate gene names: 160876679

Gene position: 4201714-4203048 (Clockwise)

Preceding gene: 160876676

Following gene: 160876680

Centisome position: 78.58

GC content: 49.29

Gene sequence:

>1335_bases
ATGTTTGATTTTGATGCCACCGTACTTGCTAGGATCCAATTTGCTTTTACTATCTCTTTTCACATTATTTTCCCCGCCAT
CACTATCGGCCTCGCCACTTATTTAGCGGTATTAGAAGGCTTATGGTTGAAAACGGCGAATCAGGTGTACCAACAACTCT
ATCAATTTTGGTCGAAGATTTTTGCGATTAACTTCGGCATGGGCGTGGTCTCTGGCATTGTTATGGCCTACCAATTTGGT
ACCCATTGGAGCGCGTTTTCCGCCTTCGCGGGCAGCGTAACTGGGCCGCTACTCACCTATGAAGTGCTTACCGCCTTCTT
CCTCGAAGCGGGTTTTCTGGGGGTCATGCTATTTGGTCAGCAGAAGGTCGGCAAAAACCTACATTTCTTCGCCACTTGCA
TGGTCGCCACGGGCACGATTATCTCGACCTTCTGGATCTTAGCTTCAAACAGTTGGATGCAGACGCCCCAAGGTTTTGAA
ATCGTGAACAATCGCGTCATTCCTGTAGATTGGTTTCAGATAGTGTTTAACCCTTCATTCCCCTATCGTTTAGCCCACAT
GACAGTGGCGGCCTTTATTTCGTCGGCTTTCTTTGTGGGCGCATCGGCGGCGTGGCATTTACTCAAAGGTAACGATACGC
CAGCAATCCGTAAGATGTTGTCTATGGCGATGTGGATGGCGTTAATCGTCGCGCCGCTGCAAGCTGTGATTGGTGATTTC
CATGGTTTAAATACCCTTGAATATCAGCCTGTAAAAGTCGCGGCGATGGAAGGCCATTGGCGTAATGAGGGCGATAAACC
CACACCGCTGATCTTGTTTGCCATTCCTGATATGGACGCAGAGAAAAACCACTTCAGTCTTGAAATCCCAGGGCTGGCGA
GTCTGATTTTAAAGCACGATTTAAGCAAGCAAGTGCCCGCCTTGACTGAGTATCCCGCCGAGGACAGACCCAATGTGTTG
TTAGTGTTTTGGAGTTTTAGAGTCATGGTCGGCTTAGGCCTATTAATGATTTTTGCCGGACTGTGGAGCGCTTATCTCAG
ACGCAAAGACAAACTCTACAGCAATAAACACTTTCTGCGTTTTGTGTTGGTGCTCGGCCCAGCAGGACTGCTCGCGACAC
TAGCGGGCTGGTTCACGACCGAACTTGGCCGCCAGCCTTGGGTGATCCAAGGGTTGATGCGCACCCAAGATGCCGTGTCT
TCCCATAGCGTTACCCACCTGAGTATCAGCCTAGGGATTTTCATTGTCAGTTACTGCGGCATCTTCGGTGTGGGTTATCG
TTATATGATGCGACTCATCCGCAAAGGGCCAGATATCGCAGCAACAAGCCATTAA

Upstream 100 bases:

>100_bases
TAATGGCACACAAGCTTTCACCGCTGGGCCAATATTAGGCTCAGTGGACACTGCATTAATGAATGCCTTTGTAACGAGAC
TCTTATCTCTCGAGGAAATT

Downstream 100 bases:

>100_bases
TTTTAAAGTCAATAAATCTAGTTTTACTTATTTAATCTTAAACATATTTAAGGGCTCACTATGGAATTCGATTTACCCTT
GATTTGGTTCGGGATCATCA

Product: cytochrome bd ubiquinol oxidase subunit I

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MFDFDATVLARIQFAFTISFHIIFPAITIGLATYLAVLEGLWLKTANQVYQQLYQFWSKIFAINFGMGVVSGIVMAYQFG
THWSAFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMLFGQQKVGKNLHFFATCMVATGTIISTFWILASNSWMQTPQGFE
IVNNRVIPVDWFQIVFNPSFPYRLAHMTVAAFISSAFFVGASAAWHLLKGNDTPAIRKMLSMAMWMALIVAPLQAVIGDF
HGLNTLEYQPVKVAAMEGHWRNEGDKPTPLILFAIPDMDAEKNHFSLEIPGLASLILKHDLSKQVPALTEYPAEDRPNVL
LVFWSFRVMVGLGLLMIFAGLWSAYLRRKDKLYSNKHFLRFVLVLGPAGLLATLAGWFTTELGRQPWVIQGLMRTQDAVS
SHSVTHLSISLGIFIVSYCGIFGVGYRYMMRLIRKGPDIAATSH

Sequences:

>Translated_444_residues
MFDFDATVLARIQFAFTISFHIIFPAITIGLATYLAVLEGLWLKTANQVYQQLYQFWSKIFAINFGMGVVSGIVMAYQFG
THWSAFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMLFGQQKVGKNLHFFATCMVATGTIISTFWILASNSWMQTPQGFE
IVNNRVIPVDWFQIVFNPSFPYRLAHMTVAAFISSAFFVGASAAWHLLKGNDTPAIRKMLSMAMWMALIVAPLQAVIGDF
HGLNTLEYQPVKVAAMEGHWRNEGDKPTPLILFAIPDMDAEKNHFSLEIPGLASLILKHDLSKQVPALTEYPAEDRPNVL
LVFWSFRVMVGLGLLMIFAGLWSAYLRRKDKLYSNKHFLRFVLVLGPAGLLATLAGWFTTELGRQPWVIQGLMRTQDAVS
SHSVTHLSISLGIFIVSYCGIFGVGYRYMMRLIRKGPDIAATSH
>Mature_444_residues
MFDFDATVLARIQFAFTISFHIIFPAITIGLATYLAVLEGLWLKTANQVYQQLYQFWSKIFAINFGMGVVSGIVMAYQFG
THWSAFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMLFGQQKVGKNLHFFATCMVATGTIISTFWILASNSWMQTPQGFE
IVNNRVIPVDWFQIVFNPSFPYRLAHMTVAAFISSAFFVGASAAWHLLKGNDTPAIRKMLSMAMWMALIVAPLQAVIGDF
HGLNTLEYQPVKVAAMEGHWRNEGDKPTPLILFAIPDMDAEKNHFSLEIPGLASLILKHDLSKQVPALTEYPAEDRPNVL
LVFWSFRVMVGLGLLMIFAGLWSAYLRRKDKLYSNKHFLRFVLVLGPAGLLATLAGWFTTELGRQPWVIQGLMRTQDAVS
SHSVTHLSISLGIFIVSYCGIFGVGYRYMMRLIRKGPDIAATSH

Specific function: Cytochrome Oxidase Subunit. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=505, Percent_Identity=32.8712871287129, Blast_Score=252, Evalue=4e-68,
Organism=Escherichia coli, GI87081779, Length=508, Percent_Identity=29.3307086614173, Blast_Score=234, Evalue=8e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 49558; Mature: 49558

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDFDATVLARIQFAFTISFHIIFPAITIGLATYLAVLEGLWLKTANQVYQQLYQFWSKI
CCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAINFGMGVVSGIVMAYQFGTHWSAFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMLFGQ
HHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECC
QKVGKNLHFFATCMVATGTIISTFWILASNSWMQTPQGFEIVNNRVIPVDWFQIVFNPSF
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEHEEEEECCCC
PYRLAHMTVAAFISSAFFVGASAAWHLLKGNDTPAIRKMLSMAMWMALIVAPLQAVIGDF
CHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGLNTLEYQPVKVAAMEGHWRNEGDKPTPLILFAIPDMDAEKNHFSLEIPGLASLILKHD
CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHH
LSKQVPALTEYPAEDRPNVLLVFWSFRVMVGLGLLMIFAGLWSAYLRRKDKLYSNKHFLR
HHHCCCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FVLVLGPAGLLATLAGWFTTELGRQPWVIQGLMRTQDAVSSHSVTHLSISLGIFIVSYCG
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
IFGVGYRYMMRLIRKGPDIAATSH
HHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFDFDATVLARIQFAFTISFHIIFPAITIGLATYLAVLEGLWLKTANQVYQQLYQFWSKI
CCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAINFGMGVVSGIVMAYQFGTHWSAFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMLFGQ
HHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECC
QKVGKNLHFFATCMVATGTIISTFWILASNSWMQTPQGFEIVNNRVIPVDWFQIVFNPSF
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEHEEEEECCCC
PYRLAHMTVAAFISSAFFVGASAAWHLLKGNDTPAIRKMLSMAMWMALIVAPLQAVIGDF
CHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGLNTLEYQPVKVAAMEGHWRNEGDKPTPLILFAIPDMDAEKNHFSLEIPGLASLILKHD
CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHH
LSKQVPALTEYPAEDRPNVLLVFWSFRVMVGLGLLMIFAGLWSAYLRRKDKLYSNKHFLR
HHHCCCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FVLVLGPAGLLATLAGWFTTELGRQPWVIQGLMRTQDAVSSHSVTHLSISLGIFIVSYCG
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
IFGVGYRYMMRLIRKGPDIAATSH
HHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]