| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876662
Identifier: 160876662
GI number: 160876662
Start: 4180662
End: 4180886
Strand: Reverse
Name: 160876662
Synonym: Sbal195_3556
Alternate gene names: NA
Gene position: 4180886-4180662 (Counterclockwise)
Preceding gene: 160876663
Following gene: 160876661
Centisome position: 78.19
GC content: 43.11
Gene sequence:
>225_bases ATGACCTCTTTTATCGCGGCATTTGTGATTTTGTTATTATTCTTTTTGCTCATGTCGATTGGTTATCTCATCAAGCGCAA AGCCGTTGAAGGAAGTTGTGGCGGTTTAGGTGTTCTAGGGATTGAGAAAGCGTGCGATTGTGATGACCCTTGTGACAAAC GTAAACGTCGTATGGCCGCTGAAGAAGCGCGTCGTGAGAAGTTAACAAAAGACCGTATTATCTAA
Upstream 100 bases:
>100_bases ACACTTGGCGATAATGCTTATCGAAAAGCAAGGCGACGGATTTAAGGTCTACTATAGCGACGCCTTCAAGCCTTTCCTTA TTTAGTTTTTGGAGTAAACC
Downstream 100 bases:
>100_bases CATTCTCTACATCGTCTGTTTTGACAATAGCCTCCCATCTGGAGGCTATTTTTTTGCCTGAAACTTATCAGCCTAGATGA TTCACTTAAATTTATCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MTSFIAAFVILLLFFLLMSIGYLIKRKAVEGSCGGLGVLGIEKACDCDDPCDKRKRRMAAEEARREKLTKDRII
Sequences:
>Translated_74_residues MTSFIAAFVILLLFFLLMSIGYLIKRKAVEGSCGGLGVLGIEKACDCDDPCDKRKRRMAAEEARREKLTKDRII >Mature_73_residues TSFIAAFVILLLFFLLMSIGYLIKRKAVEGSCGGLGVLGIEKACDCDDPCDKRKRRMAAEEARREKLTKDRII
Specific function: Unknown
COG id: COG2991
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007495 [H]
Pfam domain/function: PF04400 DUF539 [H]
EC number: NA
Molecular weight: Translated: 8296; Mature: 8165
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFIAAFVILLLFFLLMSIGYLIKRKAVEGSCGGLGVLGIEKACDCDDPCDKRKRRMAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH EEARREKLTKDRII HHHHHHHHHHHCCC >Mature Secondary Structure TSFIAAFVILLLFFLLMSIGYLIKRKAVEGSCGGLGVLGIEKACDCDDPCDKRKRRMAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH EEARREKLTKDRII HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]