Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160876629

Identifier: 160876629

GI number: 160876629

Start: 4140747

End: 4141520

Strand: Direct

Name: 160876629

Synonym: Sbal195_3523

Alternate gene names: NA

Gene position: 4140747-4141520 (Clockwise)

Preceding gene: 160876628

Following gene: 160876638

Centisome position: 77.44

GC content: 48.06

Gene sequence:

>774_bases
ATGAAATTAGTCACAAACTTTTTGCTATCACTTATCCTCTGCTGCGCTTTCTCCCTGAGCGCACAGCCGCTAAACATCTA
TACGGAAGAATGGTCACCGATCAGTTTTTCTGTTGATGGCAAACCTGCTGGTTTAGCAGTACAAGTCGTAGAAGAAATTC
AAAAACGCATCAAGAGTCCAGATCCAATTAAAGTCGTACCTTGGGCTCGCGGCTGGAAAATGCTGACCGAGCAGCCCAAC
ACTGTGTTGTTCACTATGACGCGCACTGCTGAAAGGGAACAGATGTTTACTATGATAGGACCCGTTGCTGTCGGCACGAC
CAATTTTTATGCCTTAAAAAATAGCGGCATAAAAATTACCTCGATAGAAGATGCTAAAACGGCGAAGGCAATTGGCGTCT
ATCGTGCCTCAGTGGAGGAGCGCTTGCTTACCGAACACGGCTTTACCAATGTCGCCGCCTCATCAACGCCCTTGTTAAGT
GCGAAACAATTGATGAAGCACCGTATCGATCTTTGGTGTAATGCCAATCTCACTGCGCCAAGTATTTTGTCGGATGCGGG
CGCCAGTATTGATGATGTAGAGTCCCTCTTCACGATTAGCGCTAATCATCTTTACATTGCCTTCTCACAAGGCACGCCCA
ATGAGGTGATCGAGCAGTGGAAAAATGCTCTAGAAGCGCTAAAAGCGGATGGCACCTTCGCGACGATTTACCATACTTGG
CTCCCCAACGATGCGCCGCCAATGCAGACCGAACGTATCGGGCTGGGCAACTAA

Upstream 100 bases:

>100_bases
ACCCCTAGCTATACTTGATTTGAACACAGCGTTCATCTTTAATCGTTTTAAGAGCAAGCAGTGAGACTCAATTATAACGT
TCTAATCTTTAGGGTTATTA

Downstream 100 bases:

>100_bases
ACCTATTGCGCTACGTTCTACGTTTTAAGGGCTAAGTTTTGATTTCTAAGTGCTAAGCACAAAACTCTATAACTCTTTAG
CAAGCTCTTAGAAAGGACAC

Product: extracellular solute-binding protein, family 3

Products: NA

Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction Systems; ABC-Type Amino Acid Transporter; Periplasmic Protein; Amino Acid ABC Transporter; ABC Amino Acid Transporter Periplasmic Protein; Cache Sensor Protein

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKLVTNFLLSLILCCAFSLSAQPLNIYTEEWSPISFSVDGKPAGLAVQVVEEIQKRIKSPDPIKVVPWARGWKMLTEQPN
TVLFTMTRTAEREQMFTMIGPVAVGTTNFYALKNSGIKITSIEDAKTAKAIGVYRASVEERLLTEHGFTNVAASSTPLLS
AKQLMKHRIDLWCNANLTAPSILSDAGASIDDVESLFTISANHLYIAFSQGTPNEVIEQWKNALEALKADGTFATIYHTW
LPNDAPPMQTERIGLGN

Sequences:

>Translated_257_residues
MKLVTNFLLSLILCCAFSLSAQPLNIYTEEWSPISFSVDGKPAGLAVQVVEEIQKRIKSPDPIKVVPWARGWKMLTEQPN
TVLFTMTRTAEREQMFTMIGPVAVGTTNFYALKNSGIKITSIEDAKTAKAIGVYRASVEERLLTEHGFTNVAASSTPLLS
AKQLMKHRIDLWCNANLTAPSILSDAGASIDDVESLFTISANHLYIAFSQGTPNEVIEQWKNALEALKADGTFATIYHTW
LPNDAPPMQTERIGLGN
>Mature_257_residues
MKLVTNFLLSLILCCAFSLSAQPLNIYTEEWSPISFSVDGKPAGLAVQVVEEIQKRIKSPDPIKVVPWARGWKMLTEQPN
TVLFTMTRTAEREQMFTMIGPVAVGTTNFYALKNSGIKITSIEDAKTAKAIGVYRASVEERLLTEHGFTNVAASSTPLLS
AKQLMKHRIDLWCNANLTAPSILSDAGASIDDVESLFTISANHLYIAFSQGTPNEVIEQWKNALEALKADGTFATIYHTW
LPNDAPPMQTERIGLGN

Specific function: Unknown

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28276; Mature: 28276

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVTNFLLSLILCCAFSLSAQPLNIYTEEWSPISFSVDGKPAGLAVQVVEEIQKRIKSP
CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
DPIKVVPWARGWKMLTEQPNTVLFTMTRTAEREQMFTMIGPVAVGTTNFYALKNSGIKIT
CCEEEECCCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHCCEEECCCEEEEEECCCEEEE
SIEDAKTAKAIGVYRASVEERLLTEHGFTNVAASSTPLLSAKQLMKHRIDLWCNANLTAP
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCCC
SILSDAGASIDDVESLFTISANHLYIAFSQGTPNEVIEQWKNALEALKADGTFATIYHTW
HHHHHCCCCHHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE
LPNDAPPMQTERIGLGN
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLVTNFLLSLILCCAFSLSAQPLNIYTEEWSPISFSVDGKPAGLAVQVVEEIQKRIKSP
CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
DPIKVVPWARGWKMLTEQPNTVLFTMTRTAEREQMFTMIGPVAVGTTNFYALKNSGIKIT
CCEEEECCCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHCCEEECCCEEEEEECCCEEEE
SIEDAKTAKAIGVYRASVEERLLTEHGFTNVAASSTPLLSAKQLMKHRIDLWCNANLTAP
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCCC
SILSDAGASIDDVESLFTISANHLYIAFSQGTPNEVIEQWKNALEALKADGTFATIYHTW
HHHHHCCCCHHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE
LPNDAPPMQTERIGLGN
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA