| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876626
Identifier: 160876626
GI number: 160876626
Start: 4137044
End: 4137763
Strand: Direct
Name: 160876626
Synonym: Sbal195_3520
Alternate gene names: NA
Gene position: 4137044-4137763 (Clockwise)
Preceding gene: 160876624
Following gene: 160876627
Centisome position: 77.37
GC content: 49.31
Gene sequence:
>720_bases ATGGCTTACATAAACAACACAGCAATTTTGCGGTCTCTATCCTGTGCAAGTATCAGCTTGTACTACAGCATGAGTGCGGC GGCATCGCACCTCGAAGTGGATGATCCCGCCCTCGCAGAACACTGCGAATTAGAAATGGGCTGGCAACAACCTAGGTCGG ATCATGCGCGCCCACAATTTAACGCAGCCACGACTTGCAGCCGCAATCAATGGGAATGGCATTTAGGAATAGCGTCCAAT GCCAATGACGCTATTCGTGAAGAGCAGGCTGAAGTCGGTATCAAGCTACCGCTCAACTTAAGCTCTTACTCAGATTCAGG TTCGGATTCAGATCGGCAGCAGGATGATTGGCACAGCGCTATGGTGATCAACTTGCAGAAAAACCTCGATATCGGCAACG GATTTACCACCGAAGCCTTCGGCATTATGGGCAAAACCTTAGGCGATTCCGATGTCAGTCTGTATGCCAACTTAGGTTTC ACCCATGAATTTAATCAATCAACCCAATTACTTGCGGGCATAGCGGCGGCCTATGAACTCAGTAGTCAGCATCGCCTGAT AGCAGAGCTTTATCAAAAAGAGTTGAGTAATCCGGCCTATCAGTTTGCCTATCAACACACGCCGCAACGACAGCTACAGC TGGAATTGAGCTTAGGCAATGCCCTTAGTGGCAACGCGCTGCAACTTGGCGCAGACATCACCTTTTACTTTGGTCACTAG
Upstream 100 bases:
>100_bases TTATGGGTATTTTTTGCATCTCAAAGCAAGTTTTTGCCTCAGTGGACTTCGTTTTCCCTATGGATTAACACCTAAGGGTT TACATCTGAGGAGCCTAAAT
Downstream 100 bases:
>100_bases ATCGTTGAGAGAATGAACTATGAACATGAATAACAGCACAAACAACACCAAAAAAATCATCCATAACCTACAGATGATTA TCGAGCAACGCAGTGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MAYINNTAILRSLSCASISLYYSMSAAASHLEVDDPALAEHCELEMGWQQPRSDHARPQFNAATTCSRNQWEWHLGIASN ANDAIREEQAEVGIKLPLNLSSYSDSGSDSDRQQDDWHSAMVINLQKNLDIGNGFTTEAFGIMGKTLGDSDVSLYANLGF THEFNQSTQLLAGIAAAYELSSQHRLIAELYQKELSNPAYQFAYQHTPQRQLQLELSLGNALSGNALQLGADITFYFGH
Sequences:
>Translated_239_residues MAYINNTAILRSLSCASISLYYSMSAAASHLEVDDPALAEHCELEMGWQQPRSDHARPQFNAATTCSRNQWEWHLGIASN ANDAIREEQAEVGIKLPLNLSSYSDSGSDSDRQQDDWHSAMVINLQKNLDIGNGFTTEAFGIMGKTLGDSDVSLYANLGF THEFNQSTQLLAGIAAAYELSSQHRLIAELYQKELSNPAYQFAYQHTPQRQLQLELSLGNALSGNALQLGADITFYFGH >Mature_238_residues AYINNTAILRSLSCASISLYYSMSAAASHLEVDDPALAEHCELEMGWQQPRSDHARPQFNAATTCSRNQWEWHLGIASNA NDAIREEQAEVGIKLPLNLSSYSDSGSDSDRQQDDWHSAMVINLQKNLDIGNGFTTEAFGIMGKTLGDSDVSLYANLGFT HEFNQSTQLLAGIAAAYELSSQHRLIAELYQKELSNPAYQFAYQHTPQRQLQLELSLGNALSGNALQLGADITFYFGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26395; Mature: 26264
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYINNTAILRSLSCASISLYYSMSAAASHLEVDDPALAEHCELEMGWQQPRSDHARPQF CCEECCHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCHHHHHCCEECCCCCCCCCCCCCCC NAATTCSRNQWEWHLGIASNANDAIREEQAEVGIKLPLNLSSYSDSGSDSDRQQDDWHSA CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCEE MVINLQKNLDIGNGFTTEAFGIMGKTLGDSDVSLYANLGFTHEFNQSTQLLAGIAAAYEL EEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHH SSQHRLIAELYQKELSNPAYQFAYQHTPQRQLQLELSLGNALSGNALQLGADITFYFGH CCCHHHHHHHHHHHHCCHHEEHHCCCCCCEEEEEEEEECCCCCCCEEEECCEEEEEECC >Mature Secondary Structure AYINNTAILRSLSCASISLYYSMSAAASHLEVDDPALAEHCELEMGWQQPRSDHARPQF CEECCHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCHHHHHCCEECCCCCCCCCCCCCCC NAATTCSRNQWEWHLGIASNANDAIREEQAEVGIKLPLNLSSYSDSGSDSDRQQDDWHSA CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCEE MVINLQKNLDIGNGFTTEAFGIMGKTLGDSDVSLYANLGFTHEFNQSTQLLAGIAAAYEL EEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHH SSQHRLIAELYQKELSNPAYQFAYQHTPQRQLQLELSLGNALSGNALQLGADITFYFGH CCCHHHHHHHHHHHHCCHHEEHHCCCCCCEEEEEEEEECCCCCCCEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA