| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876623
Identifier: 160876623
GI number: 160876623
Start: 4133280
End: 4134179
Strand: Direct
Name: 160876623
Synonym: Sbal195_3517
Alternate gene names: NA
Gene position: 4133280-4134179 (Clockwise)
Preceding gene: 160876622
Following gene: 160876624
Centisome position: 77.3
GC content: 49.56
Gene sequence:
>900_bases GTGGCGCAAGATGTCATCACGCAAGCACCATTAGGTTTTGGCTTAGGTCTGAGGACGCAGCATTTTGATGCCGTGCTCAA CACCGAGCCCGATATCGATTGGTTTGAAGTGCTCTCGGAAAACTACATGGTCGCCGGCGGTAAACCCCGCTATTACCTCA AGGAAATTGGCGAGCGTTATCCCTTAGTCATGCACGGTGTTTCCCTGTCGATTGGCAGTACCGATCCGCTCAATATGGAT TACCTTAAAGCCTTAAAGCAGCTCGCTAACGATGTGCAGCCCCAATGGATTTCCGATCATATCTGCTGGACCTCAATTCA CGGGGTGAACAGTCATGATCTCCTGCCACTGCCCTATACCGAAGAAACCGTTAAGCATGTGGCGCAGCGGATTAAAACCG TCCAAGATTTTTTAGGCCGCCGCATTCTGATGGAGAACGTTTCTAGCTATTTGTCCTATCAAGATTCCAGCATGGACGAA TGGGAATTCGTTAATGCCGTTGCTGAGGCTGCAGACTGTTTAATCTTGTTAGACATCAATAATATTTACGTCAGTGCCCG CAATCACAATTTCAACCCGTTGGACTACTTGAATAAAATTAATCCCAAGCGAGTGCAGCAATTCCACCTCGCCGGACACA GCGACTATGGCGACTATGTGATAGACACGCACGACCATGATGTACCGAGCAGCGTGTGGGACCTCTACTGTGCAGCACTG AAACGTTTTGGCGGCATCAGCACTATGATAGAGCGCGACGCCAATATCCCCGAGTTTTCCGCCCTCGAAACCGAACTCAC GATTGCCAGAAATATCGCCCGCGATACCTTAGGTGAGGCGCATCCACTCAACGCCGCCAAAGGTAGAAAGAACATACATG AAGGAAAGGTTATCGCATGA
Upstream 100 bases:
>100_bases CAATATGCTGATTAAAAAATCGTGACCAGTTTGTGCTGGTCACGTTTATCCCCCCTGTTTACCACACATTCAGCAGAAGA CTTAAGGATAAGGAGTCAAT
Downstream 100 bases:
>100_bases GCCAACTTCAGCAGCTGCAACACGCATTTATGGATTATCTGCTGGCGAGTGCGGCGGTAGATACGCCGTCAACCCTTGAG AAAACCACGCAAACCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MAQDVITQAPLGFGLGLRTQHFDAVLNTEPDIDWFEVLSENYMVAGGKPRYYLKEIGERYPLVMHGVSLSIGSTDPLNMD YLKALKQLANDVQPQWISDHICWTSIHGVNSHDLLPLPYTEETVKHVAQRIKTVQDFLGRRILMENVSSYLSYQDSSMDE WEFVNAVAEAADCLILLDINNIYVSARNHNFNPLDYLNKINPKRVQQFHLAGHSDYGDYVIDTHDHDVPSSVWDLYCAAL KRFGGISTMIERDANIPEFSALETELTIARNIARDTLGEAHPLNAAKGRKNIHEGKVIA
Sequences:
>Translated_299_residues MAQDVITQAPLGFGLGLRTQHFDAVLNTEPDIDWFEVLSENYMVAGGKPRYYLKEIGERYPLVMHGVSLSIGSTDPLNMD YLKALKQLANDVQPQWISDHICWTSIHGVNSHDLLPLPYTEETVKHVAQRIKTVQDFLGRRILMENVSSYLSYQDSSMDE WEFVNAVAEAADCLILLDINNIYVSARNHNFNPLDYLNKINPKRVQQFHLAGHSDYGDYVIDTHDHDVPSSVWDLYCAAL KRFGGISTMIERDANIPEFSALETELTIARNIARDTLGEAHPLNAAKGRKNIHEGKVIA >Mature_298_residues AQDVITQAPLGFGLGLRTQHFDAVLNTEPDIDWFEVLSENYMVAGGKPRYYLKEIGERYPLVMHGVSLSIGSTDPLNMDY LKALKQLANDVQPQWISDHICWTSIHGVNSHDLLPLPYTEETVKHVAQRIKTVQDFLGRRILMENVSSYLSYQDSSMDEW EFVNAVAEAADCLILLDINNIYVSARNHNFNPLDYLNKINPKRVQQFHLAGHSDYGDYVIDTHDHDVPSSVWDLYCAALK RFGGISTMIERDANIPEFSALETELTIARNIARDTLGEAHPLNAAKGRKNIHEGKVIA
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 33783; Mature: 33651
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDVITQAPLGFGLGLRTQHFDAVLNTEPDIDWFEVLSENYMVAGGKPRYYLKEIGERY CCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCCHHHHHHCCCC PLVMHGVSLSIGSTDPLNMDYLKALKQLANDVQPQWISDHICWTSIHGVNSHDLLPLPYT CEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCCCCC EETVKHVAQRIKTVQDFLGRRILMENVSSYLSYQDSSMDEWEFVNAVAEAADCLILLDIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEEC NIYVSARNHNFNPLDYLNKINPKRVQQFHLAGHSDYGDYVIDTHDHDVPSSVWDLYCAAL EEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHH KRFGGISTMIERDANIPEFSALETELTIARNIARDTLGEAHPLNAAKGRKNIHEGKVIA HHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure AQDVITQAPLGFGLGLRTQHFDAVLNTEPDIDWFEVLSENYMVAGGKPRYYLKEIGERY CCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCCHHHHHHCCCC PLVMHGVSLSIGSTDPLNMDYLKALKQLANDVQPQWISDHICWTSIHGVNSHDLLPLPYT CEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCCCCC EETVKHVAQRIKTVQDFLGRRILMENVSSYLSYQDSSMDEWEFVNAVAEAADCLILLDIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEEC NIYVSARNHNFNPLDYLNKINPKRVQQFHLAGHSDYGDYVIDTHDHDVPSSVWDLYCAAL EEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHH KRFGGISTMIERDANIPEFSALETELTIARNIARDTLGEAHPLNAAKGRKNIHEGKVIA HHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA