Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is yecA [C]

Identifier: 160876616

GI number: 160876616

Start: 4126334

End: 4126672

Strand: Direct

Name: yecA [C]

Synonym: Sbal195_3510

Alternate gene names: 160876616

Gene position: 4126334-4126672 (Clockwise)

Preceding gene: 160876615

Following gene: 160876620

Centisome position: 77.17

GC content: 44.25

Gene sequence:

>339_bases
ATGTCTGACAAATTTTTCTTCAAAGGTCGTAAAACACCTAAGCCAAAGCATGAGAGCTTTGGCTACAACACTAAGCGTGC
CGCTAAACCGGGTACAGAAGCCTTACCTCTGCAATTAATCGTTGCCGATGAAACGCGTAAACTCGAAGTTGCTGCGATTG
TTGCCGAACACCAACTGTTTGCTAATATCGAAGTCAATGCCGACGTTGCTGAAGATATCCTTGAATTAGAAGGTTTATTG
AATAAGCCTAAGACCACGACGTTCGAGAAAAAACCGAATCGTAACGAGCCTTGCGCTTGTGGTAGCGGTCAAAAATTCAA
GAAGTGCTGCGGCAAGTAA

Upstream 100 bases:

>100_bases
AGCCACGCATTTATCGAAAAAAGTTCTGAGTTCGATTTATAAAATCGGCGTTTTATAGTATAAGCATCGTCAATTTCATA
CACTGCTCGACGGAACCAAC

Downstream 100 bases:

>100_bases
ACGCTTTAATCAGCGTTATGAGTAATAAAATAGATAGGGACTTTTGCTGTGACGTTTTTGTACGTCGGGAATAGCCCCTT
TTCTCTCCCCAATTCTAGTT

Product: SecC motif-containing protein

Products: NA

Alternate protein names: SEC-C Motif Domain-Containing Protein; SEC-C Motif Domain Protein; Preprotein Translocase Subunit-Like Protein; ATPase

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSDKFFFKGRKTPKPKHESFGYNTKRAAKPGTEALPLQLIVADETRKLEVAAIVAEHQLFANIEVNADVAEDILELEGLL
NKPKTTTFEKKPNRNEPCACGSGQKFKKCCGK

Sequences:

>Translated_112_residues
MSDKFFFKGRKTPKPKHESFGYNTKRAAKPGTEALPLQLIVADETRKLEVAAIVAEHQLFANIEVNADVAEDILELEGLL
NKPKTTTFEKKPNRNEPCACGSGQKFKKCCGK
>Mature_111_residues
SDKFFFKGRKTPKPKHESFGYNTKRAAKPGTEALPLQLIVADETRKLEVAAIVAEHQLFANIEVNADVAEDILELEGLLN
KPKTTTFEKKPNRNEPCACGSGQKFKKCCGK

Specific function: Unknown

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12451; Mature: 12320

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKFFFKGRKTPKPKHESFGYNTKRAAKPGTEALPLQLIVADETRKLEVAAIVAEHQLF
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEHEEEEECCCEE
ANIEVNADVAEDILELEGLLNKPKTTTFEKKPNRNEPCACGSGQKFKKCCGK
EEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SDKFFFKGRKTPKPKHESFGYNTKRAAKPGTEALPLQLIVADETRKLEVAAIVAEHQLF
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEHEEEEECCCEE
ANIEVNADVAEDILELEGLLNKPKTTTFEKKPNRNEPCACGSGQKFKKCCGK
EEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA