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The map label for this gene is intA [C]

Identifier: 160876593

GI number: 160876593

Start: 4109132

End: 4110400

Strand: Reverse

Name: intA [C]

Synonym: Sbal195_3487

Alternate gene names: 160876593

Gene position: 4110400-4109132 (Counterclockwise)

Preceding gene: 160876594

Following gene: 160876592

Centisome position: 76.87

GC content: 52.56

Gene sequence:

>1269_bases
ATGGCGCAGGTGATGACAGCAACAGGCGTAGAGCAAGGCAAGTTAAACGATGCGGTATTGCGCCGTTGGTTGCGGGCAGG
GATAACGCGGGACTTTCGGGACACGCAGTTTCCGGCGGTGCGGTTACGGGCCTCGACCGATAGACGCCAAGCCTCGGTGT
ATTTAGTGATGAACGAAGCGGGCAAAACCGTGTGGCAAAAGCAGGGCGTGTGGCCAGTGATGTGCTTAAAGACCTTTTTA
ACCGAGTTACCCAGTTTGCTCGCCAAACGCAGTATGGGCCAAACGGTCATCAGCAACGAGTTTGCCACGGTAGCGCAATT
GCTGGCGTGGTTTGTCACCCATGTAGAGTGCAACCGCACCTTAAGCAACAGCTGGCGCAGTAACTGTAAATCGTTAGTGA
GTAAACATCTCAGTGGCTGCTTTGCTGAGTTACCACTCAATGAGCTGAACTTTATTGCAGTGGACAGTTATTTAATCAAA
CCCATGTTGGCGCAGGGGTATTCGGCCAATTACATCAAAGCGGCGGTGAAGGTGTTGAAACGGGCGTTATCGGTTGCGGC
GGATTTACGGGTGTTAGACAGCAATAGCTTGGCGGGGTATCGGGTGCAAATGAGTTTGAAGATGCCGCCTTTGGTGGGCA
CGCAATTAAGCGAGTCGGACGTGGGCCCATTATTCAGCGCATTGCGAAATGCAGTAAGACCGGTGGCCATGCTGTTTGTG
TTAATGCTGATGTTCGGTACCCGCATAGGTGAAACCCGTTTAGCACGTTGGGACCACTTTGCCGGTGATTATTGGTTTAT
TCCCGCCGAGAATGCCAAGAACCGCCAAGAGCATCGCCTGCCCATGACGCCGACAGCCAAGAAGCTGATAACCCATTACG
CCCAATGGCAATACACCCATGTGGGCAAGCGGGCGTTTTTGTTCCCAGGCGAAGTGGGACCGGTGAGCATTCGCACTGCG
CAATATTGGAGTGAAACGATTCGGTTTAAGGCGTTTACCTCCCATGCACTAAGAAAATTGTGCCGCACCATTATTGCCGA
CATGGGGGTAGATACCATGGTGGGTGAGCGGATATTGAATCACACCTTGCCGTTACTGCTGCGAACGTACGTCAACAGCA
CTTTAGATAAAGGCATGTTGATGGCGTTGGATGCCTACCATGCACACTTAATCACGCTGGGGTTTGATGATGTGGCGCCC
GAGATTATGCGCCAATCGACCACTGAGCCGAGTGAGCCAGACGAGCCAATGTTAGTGGGGTGGTTATGA

Upstream 100 bases:

>100_bases
AGCCTTAAGTGCGCGGTTTCGGGATATGCCGATGAACCAGCGAGTTAAGCGCATTCGCTCGGGTACCCATCACACCTTTG
AATATCGGTTGGAGGGCTAG

Downstream 100 bases:

>100_bases
CAATGACAATAACAAAAACAATCACAAATAAAACAAGTGGGTTATGGACTTCACGCAGGAGGATTTATGGCTAATCGCGC
CGCGGATGTATTGAAAGTAG

Product: integrase family protein

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase Family Protein; Phage Family Integrase

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MAQVMTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFL
TELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFAELPLNELNFIAVDSYLIK
PMLAQGYSANYIKAAVKVLKRALSVAADLRVLDSNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAVRPVAMLFV
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTHVGKRAFLFPGEVGPVSIRTA
QYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAP
EIMRQSTTEPSEPDEPMLVGWL

Sequences:

>Translated_422_residues
MAQVMTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFL
TELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFAELPLNELNFIAVDSYLIK
PMLAQGYSANYIKAAVKVLKRALSVAADLRVLDSNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAVRPVAMLFV
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTHVGKRAFLFPGEVGPVSIRTA
QYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAP
EIMRQSTTEPSEPDEPMLVGWL
>Mature_421_residues
AQVMTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFLT
ELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFAELPLNELNFIAVDSYLIKP
MLAQGYSANYIKAAVKVLKRALSVAADLRVLDSNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAVRPVAMLFVL
MLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTHVGKRAFLFPGEVGPVSIRTAQ
YWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPE
IMRQSTTEPSEPDEPMLVGWL

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47570; Mature: 47439

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVMTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEA
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECC
GKTVWQKQGVWPVMCLKTFLTELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRT
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNSWRSNCKSLVSKHLSGCFAELPLNELNFIAVDSYLIKPMLAQGYSANYIKAAVKVLK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
RALSVAADLRVLDSNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAVRPVAMLFV
HHHHHHHHHHEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTH
HHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHC
VGKRAFLFPGEVGPVSIRTAQYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILN
CCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPEIMRQSTTEPSEPDEPMLVG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEC
WL
CC
>Mature Secondary Structure 
AQVMTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEA
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECC
GKTVWQKQGVWPVMCLKTFLTELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRT
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNSWRSNCKSLVSKHLSGCFAELPLNELNFIAVDSYLIKPMLAQGYSANYIKAAVKVLK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
RALSVAADLRVLDSNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAVRPVAMLFV
HHHHHHHHHHEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTH
HHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHC
VGKRAFLFPGEVGPVSIRTAQYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILN
CCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPEIMRQSTTEPSEPDEPMLVG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEC
WL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA