| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876588
Identifier: 160876588
GI number: 160876588
Start: 4103735
End: 4105312
Strand: Reverse
Name: 160876588
Synonym: Sbal195_3482
Alternate gene names: NA
Gene position: 4105312-4103735 (Counterclockwise)
Preceding gene: 160876589
Following gene: 160876587
Centisome position: 76.77
GC content: 41.95
Gene sequence:
>1578_bases ATGAGAATCCGTGCAGATGTGCTTCGTACTTATCAGTCTATCCATACGTGGACGGGAATATTAACTGGACTGCTATTATT CATTGCTTTTTATGCGGGTGCATTGACTATGTTCAAACCGCAAATTGAGCAATGGGCTATACCGTCAAATCAGCAGTTAG CTCAAGTACCCAGTGAGCGGTTGGATGAGTTAATTACGCAGGCATTGAGCCAATATGATAAAGCTAGAGAAGGTTTTATT ATCAGCTTTGATGAAAATGAATCACCAATGAAGTGGTACGAACATGGCGGCGGTCGGGGTATTCGATTAGATGATCAATT ACGGCATGCAAGCTTGACTGAGCGTGGCGAGATTATCACTCAAATGAGTAGTACTAATGAGTTGGGTACGTTAATTGACC AACTGCATCGTACTGCTGGCATCATCGGTAAAGTGGGCCATGAAGATTTAGGCGTGATTGTTTTAGGTGTGGCAGCCCTA TTGTATTTTTTGGCGTTAGTGTCAGGTGTTATTATTTTGCTGCCTACTTTAGTCAAAAACCTGTTCGCACTGAGGCAAAA TAAGGGAAGTAATCGCCTTTGGCTAGACAGCCATAATCTCGTTGGTATCATCAGTTTGCCATTCCACATTATCATCGCAT GGACAGTGATTGTTTTTGCATTCCACGACTTTTTTTATGGTGGGTTGGGTATCGTTTATGGTGATAAACCTTTATTTGAA CGGCCTGTACGCTCAAATGTTGAATACTCAATTACTGAACTTCCATCAATGGCAACGTATCGACAGCAATTGAGTGCAAT GACCCATGGCTATAAAATTGTTTCTATGGCGTTTTCAAACCTTTCAACTACCAATCCCGCGCTAGCTGTCGAAGTAAAAA CCGATGGGCAGATAATGCGTGGTGGCTATAGCGATTTTATTTATCTGAACCCTTATACCTTTGCGGTGCAATTTAACACA CTTAATCAAGCCAGTGAGGGGGCGTATGGTCCTATTGTAAACAGTTTGTTTGCTCTGCATTTTGGTAATTACGCGGGTGA CTTTGGTCGCTGGATGTATTTTGCCTTTGGTTTATTAGGGGCATTTTTGTTTTATAGTGGCAATTTACTCTGGCTAGAAA AACGTCGTAAAAAGCAAGCAGAGCAGCAAGCATCGACACGTTTTATGGCATCGCTGACAATTGGTGTTTGTTTAGGGTCA ATGTTGGGGGTGAGTTTCGCTATCTTGGTGACTAAATGGCTTTATCTGGTAACTCATCAGGTCAATAGTCATTATCTTGC GTGTTACTACGTTATATTTTTTGGGGCGATTATTTATAGTTTTGTTCGTAACCCTGCGTTGGCCGCAATCCATATACTGA AGTTATTAGCATTAGTTTGTGCATTGATCCCTGTGAGTACACTCATCTCACCGCTGTTTGCACCATCCGAGTCGATTGCT TATGCTAGTTTGGGGCCAGTTGATATGGTGGCGTTGATTTTTGCAATATGCTTTTATTTCTGCGCCCAGAAAGTTTATAA GCGAGCTTATTTTGGAGAACGAAATAGTATTTGGGCATTGTCGAACGCGGGCACTTAA
Upstream 100 bases:
>100_bases CACTGAGTTTTTTATTCAAGACCGCAACCACAGCTTTGTGTGGCTTGGTTTTGGCTAATGTTGCTATTTATCTTATTTTC ATCGGGTTATGGACATTGTT
Downstream 100 bases:
>100_bases TCAATGTGGATGTTGTAGTGGATCAGTAAATTTGCATCACTCCGAAGTGCGACACTCATCAATTAAGCAGCTAATTGGTT AAACACAACCGCTCGAAAGG
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix; PepSY-Associated TM Helix Family; Transmembrane Protein; PepSY-Associated TM Helix Domain Protein; Response Regulator Receiver Protein; Iron-Regulated Membrane Protein; Iron Uptake Protein; PepSY-Associated TM Helix Family Protein; Aspartate Kinase
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MRIRADVLRTYQSIHTWTGILTGLLLFIAFYAGALTMFKPQIEQWAIPSNQQLAQVPSERLDELITQALSQYDKAREGFI ISFDENESPMKWYEHGGGRGIRLDDQLRHASLTERGEIITQMSSTNELGTLIDQLHRTAGIIGKVGHEDLGVIVLGVAAL LYFLALVSGVIILLPTLVKNLFALRQNKGSNRLWLDSHNLVGIISLPFHIIIAWTVIVFAFHDFFYGGLGIVYGDKPLFE RPVRSNVEYSITELPSMATYRQQLSAMTHGYKIVSMAFSNLSTTNPALAVEVKTDGQIMRGGYSDFIYLNPYTFAVQFNT LNQASEGAYGPIVNSLFALHFGNYAGDFGRWMYFAFGLLGAFLFYSGNLLWLEKRRKKQAEQQASTRFMASLTIGVCLGS MLGVSFAILVTKWLYLVTHQVNSHYLACYYVIFFGAIIYSFVRNPALAAIHILKLLALVCALIPVSTLISPLFAPSESIA YASLGPVDMVALIFAICFYFCAQKVYKRAYFGERNSIWALSNAGT
Sequences:
>Translated_525_residues MRIRADVLRTYQSIHTWTGILTGLLLFIAFYAGALTMFKPQIEQWAIPSNQQLAQVPSERLDELITQALSQYDKAREGFI ISFDENESPMKWYEHGGGRGIRLDDQLRHASLTERGEIITQMSSTNELGTLIDQLHRTAGIIGKVGHEDLGVIVLGVAAL LYFLALVSGVIILLPTLVKNLFALRQNKGSNRLWLDSHNLVGIISLPFHIIIAWTVIVFAFHDFFYGGLGIVYGDKPLFE RPVRSNVEYSITELPSMATYRQQLSAMTHGYKIVSMAFSNLSTTNPALAVEVKTDGQIMRGGYSDFIYLNPYTFAVQFNT LNQASEGAYGPIVNSLFALHFGNYAGDFGRWMYFAFGLLGAFLFYSGNLLWLEKRRKKQAEQQASTRFMASLTIGVCLGS MLGVSFAILVTKWLYLVTHQVNSHYLACYYVIFFGAIIYSFVRNPALAAIHILKLLALVCALIPVSTLISPLFAPSESIA YASLGPVDMVALIFAICFYFCAQKVYKRAYFGERNSIWALSNAGT >Mature_525_residues MRIRADVLRTYQSIHTWTGILTGLLLFIAFYAGALTMFKPQIEQWAIPSNQQLAQVPSERLDELITQALSQYDKAREGFI ISFDENESPMKWYEHGGGRGIRLDDQLRHASLTERGEIITQMSSTNELGTLIDQLHRTAGIIGKVGHEDLGVIVLGVAAL LYFLALVSGVIILLPTLVKNLFALRQNKGSNRLWLDSHNLVGIISLPFHIIIAWTVIVFAFHDFFYGGLGIVYGDKPLFE RPVRSNVEYSITELPSMATYRQQLSAMTHGYKIVSMAFSNLSTTNPALAVEVKTDGQIMRGGYSDFIYLNPYTFAVQFNT LNQASEGAYGPIVNSLFALHFGNYAGDFGRWMYFAFGLLGAFLFYSGNLLWLEKRRKKQAEQQASTRFMASLTIGVCLGS MLGVSFAILVTKWLYLVTHQVNSHYLACYYVIFFGAIIYSFVRNPALAAIHILKLLALVCALIPVSTLISPLFAPSESIA YASLGPVDMVALIFAICFYFCAQKVYKRAYFGERNSIWALSNAGT
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58614; Mature: 58614
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRADVLRTYQSIHTWTGILTGLLLFIAFYAGALTMFKPQIEQWAIPSNQQLAQVPSER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHH LDELITQALSQYDKAREGFIISFDENESPMKWYEHGGGRGIRLDDQLRHASLTERGEIIT HHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH QMSSTNELGTLIDQLHRTAGIIGKVGHEDLGVIVLGVAALLYFLALVSGVIILLPTLVKN HHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFALRQNKGSNRLWLDSHNLVGIISLPFHIIIAWTVIVFAFHDFFYGGLGIVYGDKPLFE HHHHHHCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHH RPVRSNVEYSITELPSMATYRQQLSAMTHGYKIVSMAFSNLSTTNPALAVEVKTDGQIMR CHHHCCCCEEHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEE GGYSDFIYLNPYTFAVQFNTLNQASEGAYGPIVNSLFALHFGNYAGDFGRWMYFAFGLLG CCCCCEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AFLFYSGNLLWLEKRRKKQAEQQASTRFMASLTIGVCLGSMLGVSFAILVTKWLYLVTHQ HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNSHYLACYYVIFFGAIIYSFVRNPALAAIHILKLLALVCALIPVSTLISPLFAPSESIA CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC YASLGPVDMVALIFAICFYFCAQKVYKRAYFGERNSIWALSNAGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC >Mature Secondary Structure MRIRADVLRTYQSIHTWTGILTGLLLFIAFYAGALTMFKPQIEQWAIPSNQQLAQVPSER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHH LDELITQALSQYDKAREGFIISFDENESPMKWYEHGGGRGIRLDDQLRHASLTERGEIIT HHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH QMSSTNELGTLIDQLHRTAGIIGKVGHEDLGVIVLGVAALLYFLALVSGVIILLPTLVKN HHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFALRQNKGSNRLWLDSHNLVGIISLPFHIIIAWTVIVFAFHDFFYGGLGIVYGDKPLFE HHHHHHCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHH RPVRSNVEYSITELPSMATYRQQLSAMTHGYKIVSMAFSNLSTTNPALAVEVKTDGQIMR CHHHCCCCEEHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEE GGYSDFIYLNPYTFAVQFNTLNQASEGAYGPIVNSLFALHFGNYAGDFGRWMYFAFGLLG CCCCCEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AFLFYSGNLLWLEKRRKKQAEQQASTRFMASLTIGVCLGSMLGVSFAILVTKWLYLVTHQ HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNSHYLACYYVIFFGAIIYSFVRNPALAAIHILKLLALVCALIPVSTLISPLFAPSESIA CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC YASLGPVDMVALIFAICFYFCAQKVYKRAYFGERNSIWALSNAGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA