| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is fatB [H]
Identifier: 160876573
GI number: 160876573
Start: 4086812
End: 4087831
Strand: Reverse
Name: fatB [H]
Synonym: Sbal195_3467
Alternate gene names: 160876573
Gene position: 4087831-4086812 (Counterclockwise)
Preceding gene: 160876574
Following gene: 160876572
Centisome position: 76.45
GC content: 43.53
Gene sequence:
>1020_bases GTGACGTCGAAATGTAAAAGCGGTACTAAAGTGATGGCGATTCTGTTATTTAGCTCAGCTTTTTTGCTGGCCTGCGACAA TAAAAGCGAGCCAGTACAGAAGACGATTCTTGCAACGTCTGATACTAGCGAGTCAAGTTTTACACCTGTTGAAATAACCC ATAAGTTGGGCACTACTGTTATTACAAAACGCCCTGTACGCGTTGCGGCCCTCGATATGAATGAAGTCGATTATCTCGAA CAGCTAGATATTCCCATTATCGGCATGCCAAAGGATTTTGTTCCTTACTACCTGCAGGACTATAGCAACAACAATGATAT CGTTGATTTAGGCGCCATCGTTCAGCCCAATATGGAACGTATTTACGCTCTCAAACCAGATCTCGTGTTGATGTCATCTA TTCAGGCAAATCATTATCAGGCGCTTTCGAATTTGGCTCCGACCATTCATTTGGATATTGATTATCAAGACAGCAACAGC GATTACTTTGATATAGTCAAACAACACTTGTTGGTGCTGGGGAAAGTATTTGATAAGCAAGCCTTGGCAAAACATAAAGT GGATGAACTGGAAAGTAAGCTCCAAAATGCCAGAAAGGTTATTCAGGATAGGCCTGAGAAAGCACTCGTGGTGCTACATA ATAATGGTGCTTTTCGATTCTTAGGTATTCGTTCTCGGTATGGGTTCATTTACAGTGGGCTAGGGGTTAAACCCGCTAGC TTATCAGAGCAGATGGGATTGCACGGCCAACCCGTGTCAAGCGAGTTCATTCTTGAAAACAATCCTGACATCATTTACGT GGTAGATAGAACCGCAGTCATGGAGCGAAGCCCCGTATTGGATAAACAGTCCATAGATAACCCTCTCTTGCGTGAGACGA ATGCTTGGAAGACGGGGAATATCATCTTTGTAGATCCCGAGGCTTGGTATATCACTGGGGCTGGAATAACATCCCTTAAC ATCATTATTGATGATGTATTAAAGGGCTATGTAAAGGAGCCGCTGGCTGTAAGTCGTTGA
Upstream 100 bases:
>100_bases AAAGATTAAAAGCACTGTACGAACTGGATCTTGAAGTGCTGAAAACGAGCCAAGGAACAGTTTGTAACTATTTCAACTTC AACTTACAAGGAGAATACAA
Downstream 100 bases:
>100_bases CTTACACCAGCTAATGATTCACTAGATAAATGCGTTATTTAGTCAAAATAGTGAATAAACTTGTTAGAAAAGTAAATTTT TAAATTAATTAAATCATAGA
Product: periplasmic-binding protein
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTSKCKSGTKVMAILLFSSAFLLACDNKSEPVQKTILATSDTSESSFTPVEITHKLGTTVITKRPVRVAALDMNEVDYLE QLDIPIIGMPKDFVPYYLQDYSNNNDIVDLGAIVQPNMERIYALKPDLVLMSSIQANHYQALSNLAPTIHLDIDYQDSNS DYFDIVKQHLLVLGKVFDKQALAKHKVDELESKLQNARKVIQDRPEKALVVLHNNGAFRFLGIRSRYGFIYSGLGVKPAS LSEQMGLHGQPVSSEFILENNPDIIYVVDRTAVMERSPVLDKQSIDNPLLRETNAWKTGNIIFVDPEAWYITGAGITSLN IIIDDVLKGYVKEPLAVSR
Sequences:
>Translated_339_residues MTSKCKSGTKVMAILLFSSAFLLACDNKSEPVQKTILATSDTSESSFTPVEITHKLGTTVITKRPVRVAALDMNEVDYLE QLDIPIIGMPKDFVPYYLQDYSNNNDIVDLGAIVQPNMERIYALKPDLVLMSSIQANHYQALSNLAPTIHLDIDYQDSNS DYFDIVKQHLLVLGKVFDKQALAKHKVDELESKLQNARKVIQDRPEKALVVLHNNGAFRFLGIRSRYGFIYSGLGVKPAS LSEQMGLHGQPVSSEFILENNPDIIYVVDRTAVMERSPVLDKQSIDNPLLRETNAWKTGNIIFVDPEAWYITGAGITSLN IIIDDVLKGYVKEPLAVSR >Mature_338_residues TSKCKSGTKVMAILLFSSAFLLACDNKSEPVQKTILATSDTSESSFTPVEITHKLGTTVITKRPVRVAALDMNEVDYLEQ LDIPIIGMPKDFVPYYLQDYSNNNDIVDLGAIVQPNMERIYALKPDLVLMSSIQANHYQALSNLAPTIHLDIDYQDSNSD YFDIVKQHLLVLGKVFDKQALAKHKVDELESKLQNARKVIQDRPEKALVVLHNNGAFRFLGIRSRYGFIYSGLGVKPASL SEQMGLHGQPVSSEFILENNPDIIYVVDRTAVMERSPVLDKQSIDNPLLRETNAWKTGNIIFVDPEAWYITGAGITSLNI IIDDVLKGYVKEPLAVSR
Specific function: Binds ferric anguibactin; part of the binding-protein- dependent transport system for uptake of ferric anguibactin [H]
COG id: COG4607
COG function: function code P; ABC-type enterochelin transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 37859; Mature: 37728
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKCKSGTKVMAILLFSSAFLLACDNKSEPVQKTILATSDTSESSFTPVEITHKLGTTV CCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCHHEEEEECCCCCCCCCCEEEHHHCCCEE ITKRPVRVAALDMNEVDYLEQLDIPIIGMPKDFVPYYLQDYSNNNDIVDLGAIVQPNMER EECCCEEEEEECCCHHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCCHH IYALKPDLVLMSSIQANHYQALSNLAPTIHLDIDYQDSNSDYFDIVKQHLLVLGKVFDKQ EEEECCCEEEEHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH ALAKHKVDELESKLQNARKVIQDRPEKALVVLHNNGAFRFLGIRSRYGFIYSGLGVKPAS HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCC LSEQMGLHGQPVSSEFILENNPDIIYVVDRTAVMERSPVLDKQSIDNPLLRETNAWKTGN HHHHCCCCCCCCCCCEEEECCCCEEEEECCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCC IIFVDPEAWYITGAGITSLNIIIDDVLKGYVKEPLAVSR EEEECCCEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TSKCKSGTKVMAILLFSSAFLLACDNKSEPVQKTILATSDTSESSFTPVEITHKLGTTV CCCCCCCHHHHHHHHHHCEEEEEECCCCCCCHHEEEEECCCCCCCCCCEEEHHHCCCEE ITKRPVRVAALDMNEVDYLEQLDIPIIGMPKDFVPYYLQDYSNNNDIVDLGAIVQPNMER EECCCEEEEEECCCHHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCCHH IYALKPDLVLMSSIQANHYQALSNLAPTIHLDIDYQDSNSDYFDIVKQHLLVLGKVFDKQ EEEECCCEEEEHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH ALAKHKVDELESKLQNARKVIQDRPEKALVVLHNNGAFRFLGIRSRYGFIYSGLGVKPAS HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCC LSEQMGLHGQPVSSEFILENNPDIIYVVDRTAVMERSPVLDKQSIDNPLLRETNAWKTGN HHHHCCCCCCCCCCCEEEECCCCEEEEECCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCC IIFVDPEAWYITGAGITSLNIIIDDVLKGYVKEPLAVSR EEEECCCEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2830268; 13129954; 1748657 [H]