| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876500
Identifier: 160876500
GI number: 160876500
Start: 4014284
End: 4015141
Strand: Reverse
Name: 160876500
Synonym: Sbal195_3394
Alternate gene names: NA
Gene position: 4015141-4014284 (Counterclockwise)
Preceding gene: 160876501
Following gene: 160876499
Centisome position: 75.09
GC content: 51.4
Gene sequence:
>858_bases ATGAGTATGGAATTGATGGTAAAAGCGATGAAGGCCAAGGTGGGCAATCCACTGCGCAAGCTGGTGTTGATCAAGCTGGC TGATAACGCCAATGACCAAGGCGAATGCTGGCCGAGTTACGAGTATATTTCGCAGGCTTGCGAGATAAGCGAGCGGTCGG CGATTAACCACATTAACGCGCTGGTTGACGTCGGACTGGTGCGCAAAATTACCCGCAAGAGTGAGCATAAACGCAATACA TCCAACCTGTATATTTTGGACTTTTCATCGTGTGTTCTGAGTGATAAACCTGCTCAAACTCTACCTTTTTCTGAGGGTGC AGCAAATTCACCCCTAGAAAATACTGAGGGTGCAGCATATTCACCCCTAGAAAATATTGGGGGTGCAGCAGATTCACCCC TAGCCAATTTTGAGGGTGCAGCAAATGCACCCATGGGTGCAGGAGATTCACCCTCTGAGGGTGCAGGAGCTGCACCCAGA ATCAGTCACTCTTTTGAACCTATCAAAGAATCTTTAAAAGATAGTTGTCCAGCAACGAGTGCTAAGTCGGTTTTCAATGC GTTTTTCAAAGCCTATCCCGCCCATCGCAAAGGCGGGTCGGATTCGGCTGCGTGGAAAGCGTGGAAGGCCGAAAAGCTGA CCGACGCCGATTGCGTGTTGGCGGTGAGCTGGTTGAAGGAGGCTGCGGCGCTGGATACCAGTTGGGGCTTTAGCGCTAAC GGCCAGTTTGTATTGGGTATTACCAAGTTTATCCGCGAACGCCACTGGCTAACGCCGTTGCCAAGACCGATGGCCGCCGC CGTTGGGCAAGTGGATTGGAGTTACGCGGTGTATGACCCAGAGGACCCCTTGATATGA
Upstream 100 bases:
>100_bases CGAATGCGGGCTTAATACCTAAGTGAGGCAATATCATGTTACTGAAGCATGGGGTTTGCGTCAATTCGAGTTTGTGGGTT GCTCCGTTTGGGGGTGACTT
Downstream 100 bases:
>100_bases CTGCCAACCAAAATGCGAGCATGAAATCACTGCAGACCTTAATCCGCCAGCCGCTGGTTGGGCAGGGGCGTGTGAGTCAA CCTGAACCCACGGCAATGGA
Product: putative replication protein
Products: NA
Alternate protein names: Phage Replication Protein; Transcriptional Regulator; Replication Of DNA; Replication Protein Phage; Bacteriophage Replication Protein
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSMELMVKAMKAKVGNPLRKLVLIKLADNANDQGECWPSYEYISQACEISERSAINHINALVDVGLVRKITRKSEHKRNT SNLYILDFSSCVLSDKPAQTLPFSEGAANSPLENTEGAAYSPLENIGGAADSPLANFEGAANAPMGAGDSPSEGAGAAPR ISHSFEPIKESLKDSCPATSAKSVFNAFFKAYPAHRKGGSDSAAWKAWKAEKLTDADCVLAVSWLKEAAALDTSWGFSAN GQFVLGITKFIRERHWLTPLPRPMAAAVGQVDWSYAVYDPEDPLI
Sequences:
>Translated_285_residues MSMELMVKAMKAKVGNPLRKLVLIKLADNANDQGECWPSYEYISQACEISERSAINHINALVDVGLVRKITRKSEHKRNT SNLYILDFSSCVLSDKPAQTLPFSEGAANSPLENTEGAAYSPLENIGGAADSPLANFEGAANAPMGAGDSPSEGAGAAPR ISHSFEPIKESLKDSCPATSAKSVFNAFFKAYPAHRKGGSDSAAWKAWKAEKLTDADCVLAVSWLKEAAALDTSWGFSAN GQFVLGITKFIRERHWLTPLPRPMAAAVGQVDWSYAVYDPEDPLI >Mature_284_residues SMELMVKAMKAKVGNPLRKLVLIKLADNANDQGECWPSYEYISQACEISERSAINHINALVDVGLVRKITRKSEHKRNTS NLYILDFSSCVLSDKPAQTLPFSEGAANSPLENTEGAAYSPLENIGGAADSPLANFEGAANAPMGAGDSPSEGAGAAPRI SHSFEPIKESLKDSCPATSAKSVFNAFFKAYPAHRKGGSDSAAWKAWKAEKLTDADCVLAVSWLKEAAALDTSWGFSANG QFVLGITKFIRERHWLTPLPRPMAAAVGQVDWSYAVYDPEDPLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30709; Mature: 30578
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMELMVKAMKAKVGNPLRKLVLIKLADNANDQGECWPSYEYISQACEISERSAINHINA CCHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LVDVGLVRKITRKSEHKRNTSNLYILDFSSCVLSDKPAQTLPFSEGAANSPLENTEGAAY HHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPLENIGGAADSPLANFEGAANAPMGAGDSPSEGAGAAPRISHSFEPIKESLKDSCPATS CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCH AKSVFNAFFKAYPAHRKGGSDSAAWKAWKAEKLTDADCVLAVSWLKEAAALDTSWGFSAN HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC GQFVLGITKFIRERHWLTPLPRPMAAAVGQVDWSYAVYDPEDPLI CCEEEHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure SMELMVKAMKAKVGNPLRKLVLIKLADNANDQGECWPSYEYISQACEISERSAINHINA CHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LVDVGLVRKITRKSEHKRNTSNLYILDFSSCVLSDKPAQTLPFSEGAANSPLENTEGAAY HHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPLENIGGAADSPLANFEGAANAPMGAGDSPSEGAGAAPRISHSFEPIKESLKDSCPATS CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCH AKSVFNAFFKAYPAHRKGGSDSAAWKAWKAEKLTDADCVLAVSWLKEAAALDTSWGFSAN HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC GQFVLGITKFIRERHWLTPLPRPMAAAVGQVDWSYAVYDPEDPLI CCEEEHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA