| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876494
Identifier: 160876494
GI number: 160876494
Start: 4010322
End: 4010861
Strand: Reverse
Name: 160876494
Synonym: Sbal195_3388
Alternate gene names: NA
Gene position: 4010861-4010322 (Counterclockwise)
Preceding gene: 160876495
Following gene: 160876490
Centisome position: 75.01
GC content: 39.07
Gene sequence:
>540_bases GTGAATCAAAAATCAGAATTTGATGCTTCGGCGTCGATGCTCGGGTGCAACCAACACACTTACAGCACGCTATCAGGTGA GCTTCAAGAACAACTTGATGGAAACTATTACAATATTCGTAGTAATAGTTTTCTTTTAGAACCCTCAATCGGCATCTCTT ATCAACAATCTATAAATTGGGGGAAATGGGTTTATGACAGTCGTTTCAGTCCTTTTTATGGCTGGACATTTGCAGGTAAT GAAGCAACCCGAGGTGCTAACCCTAGTGGCTGGGAATGGGTAAATGGTGTGAAAGGTTACTTTGATATTCATGCTGATAA ATATGCAATAGAAACGGCCTACCTAAAAGCCTCACGTATTGATATTGGTGGAGATATGCGTCCCTCCTTTAATACCAATG AATATTATGAAGTTGGCGTAGGTATTCTATTAGGTAGCCAATTCTTTAAAGGATGGATAGATAACATAGGTATCGGTTTA AACTTAAATATAGGCAGTAGTTTAAGTGGGGGAAGTCTGGTTGTCTATTTCAATGAATGA
Upstream 100 bases:
>100_bases ATCAAGTCCTACAAATGATTTATTCCCTGCAAACAGCGCATAAATACTAAGACGTTATGTGTATCTAGAGGCAGGCATCA AACTAAAACGGAGTTTAAAT
Downstream 100 bases:
>100_bases CACCCGAAAAACACTAAAGCTACGAAACTAAGTATTGTCTATAAGTAAATCACAAAACTGCATCACTTTGTCGTATAACA ACTTTCTACCTTGCTGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MNQKSEFDASASMLGCNQHTYSTLSGELQEQLDGNYYNIRSNSFLLEPSIGISYQQSINWGKWVYDSRFSPFYGWTFAGN EATRGANPSGWEWVNGVKGYFDIHADKYAIETAYLKASRIDIGGDMRPSFNTNEYYEVGVGILLGSQFFKGWIDNIGIGL NLNIGSSLSGGSLVVYFNE
Sequences:
>Translated_179_residues MNQKSEFDASASMLGCNQHTYSTLSGELQEQLDGNYYNIRSNSFLLEPSIGISYQQSINWGKWVYDSRFSPFYGWTFAGN EATRGANPSGWEWVNGVKGYFDIHADKYAIETAYLKASRIDIGGDMRPSFNTNEYYEVGVGILLGSQFFKGWIDNIGIGL NLNIGSSLSGGSLVVYFNE >Mature_179_residues MNQKSEFDASASMLGCNQHTYSTLSGELQEQLDGNYYNIRSNSFLLEPSIGISYQQSINWGKWVYDSRFSPFYGWTFAGN EATRGANPSGWEWVNGVKGYFDIHADKYAIETAYLKASRIDIGGDMRPSFNTNEYYEVGVGILLGSQFFKGWIDNIGIGL NLNIGSSLSGGSLVVYFNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19974; Mature: 19974
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKSEFDASASMLGCNQHTYSTLSGELQEQLDGNYYNIRSNSFLLEPSIGISYQQSINW CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCEECCCCCC GKWVYDSRFSPFYGWTFAGNEATRGANPSGWEWVNGVKGYFDIHADKYAIETAYLKASRI CCEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCEEEEECCCCEEEEEEEEEEEEE DIGGDMRPSFNTNEYYEVGVGILLGSQFFKGWIDNIGIGLNLNIGSSLSGGSLVVYFNE ECCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECC >Mature Secondary Structure MNQKSEFDASASMLGCNQHTYSTLSGELQEQLDGNYYNIRSNSFLLEPSIGISYQQSINW CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCEECCCCCC GKWVYDSRFSPFYGWTFAGNEATRGANPSGWEWVNGVKGYFDIHADKYAIETAYLKASRI CCEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCEEEEECCCCEEEEEEEEEEEEE DIGGDMRPSFNTNEYYEVGVGILLGSQFFKGWIDNIGIGLNLNIGSSLSGGSLVVYFNE ECCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA