| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yedA [C]
Identifier: 160876423
GI number: 160876423
Start: 3911576
End: 3912487
Strand: Reverse
Name: yedA [C]
Synonym: Sbal195_3317
Alternate gene names: 160876423
Gene position: 3912487-3911576 (Counterclockwise)
Preceding gene: 160876426
Following gene: 160876421
Centisome position: 73.17
GC content: 49.01
Gene sequence:
>912_bases ATGGCAGCTGTGATGTATTTGCTGATGATTTTTGTGTGGGGTTTTTCGTGGATTGCCATTAAGTGGCAGCACGGTGAGGT GGCGACAGAAGTCTCGATTTTTTATCGCTTCGCGATAGCGAGCCTGTTGATGTTCGCCATCGGCTTTGCCTTTAACAAGC TGCAAGCGGTAAAGCTTAGGCAGCATCCTTGGTTTGCACTGCAAGGCGTGTGTCTATTTTGTTTGAACTTTATCGCGTTC TATACCGCAACCCATTATATCGCCAGCGGTTTAACGGCGGTGATTATGGCCACTGCGCCCATTTTTAATGCGATACATGG CCGCATTTTTTACGGCACGCCCACTACCCGCAACTTTTGGTTAGGAGTCAGTGTCGGTCTGGGGGGCATTATCTTACTCT TTGGTGCCGATTTGCTCGCGACTCAGTGGTCACAAACCTTAGTATGGGGCTTACTGTTTTCGCTGCTAGGTACGTGGTTT TTCTCGATTGGCAATATGATCAGCATGCGTAACTCGCGCGATAATGTGTCGCCTTTTACCTCGACAGCATATGCCATGTG CTACGGCAGTGCGGCGTTACTGCTGATCATCTGGTTTAAAGGTTTAAGCTTTAGTTTACCGCTGACAACGAGTTATCTTG GCAGCTTGTTCTACTTAGCCGTTATCGCCTCTGTGATTGGCTTTACCGCTTATTTGATCTTGGTTGAGCGAATTGGCGCT AACGCAGCGGCGTATCTGTTGGTGATAACCCCTGTGGTGGCGCTTAGTGTATCGAATGTGTTTGAGGATTATCACTGGAC TTGGTATTCAAGTGTGGGACTCTTGCTGGTCGCGCTCGGTAACATGTTAACGCGCCGCCAACGACCGCTTGCTTGGTTTA AGTCTTCTACCACGCCAGCGCTGAAAGCCTAA
Upstream 100 bases:
>100_bases CAATATCGTGTTATGACCCACAAGATGGTGACATAAGGACGAAAGCCATCGCTGTATAGTTCGTCTCATTAAGTATTTTA TGAAGGTGAGGGGGCTCATT
Downstream 100 bases:
>100_bases CGTCGCAGCTAGCGTCATGATGCACATGAGGCAAGGCTCGATTCGACGATTGTAAGTCAGTCGAGCCAGTACTTATTTGA AATATTGTGCCGGTGTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MAAVMYLLMIFVWGFSWIAIKWQHGEVATEVSIFYRFAIASLLMFAIGFAFNKLQAVKLRQHPWFALQGVCLFCLNFIAF YTATHYIASGLTAVIMATAPIFNAIHGRIFYGTPTTRNFWLGVSVGLGGIILLFGADLLATQWSQTLVWGLLFSLLGTWF FSIGNMISMRNSRDNVSPFTSTAYAMCYGSAALLLIIWFKGLSFSLPLTTSYLGSLFYLAVIASVIGFTAYLILVERIGA NAAAYLLVITPVVALSVSNVFEDYHWTWYSSVGLLLVALGNMLTRRQRPLAWFKSSTTPALKA
Sequences:
>Translated_303_residues MAAVMYLLMIFVWGFSWIAIKWQHGEVATEVSIFYRFAIASLLMFAIGFAFNKLQAVKLRQHPWFALQGVCLFCLNFIAF YTATHYIASGLTAVIMATAPIFNAIHGRIFYGTPTTRNFWLGVSVGLGGIILLFGADLLATQWSQTLVWGLLFSLLGTWF FSIGNMISMRNSRDNVSPFTSTAYAMCYGSAALLLIIWFKGLSFSLPLTTSYLGSLFYLAVIASVIGFTAYLILVERIGA NAAAYLLVITPVVALSVSNVFEDYHWTWYSSVGLLLVALGNMLTRRQRPLAWFKSSTTPALKA >Mature_302_residues AAVMYLLMIFVWGFSWIAIKWQHGEVATEVSIFYRFAIASLLMFAIGFAFNKLQAVKLRQHPWFALQGVCLFCLNFIAFY TATHYIASGLTAVIMATAPIFNAIHGRIFYGTPTTRNFWLGVSVGLGGIILLFGADLLATQWSQTLVWGLLFSLLGTWFF SIGNMISMRNSRDNVSPFTSTAYAMCYGSAALLLIIWFKGLSFSLPLTTSYLGSLFYLAVIASVIGFTAYLILVERIGAN AAAYLLVITPVVALSVSNVFEDYHWTWYSSVGLLLVALGNMLTRRQRPLAWFKSSTTPALKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33630; Mature: 33499
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVMYLLMIFVWGFSWIAIKWQHGEVATEVSIFYRFAIASLLMFAIGFAFNKLQAVKLR CHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHPWFALQGVCLFCLNFIAFYTATHYIASGLTAVIMATAPIFNAIHGRIFYGTPTTRNFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEE LGVSVGLGGIILLFGADLLATQWSQTLVWGLLFSLLGTWFFSIGNMISMRNSRDNVSPFT EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH STAYAMCYGSAALLLIIWFKGLSFSLPLTTSYLGSLFYLAVIASVIGFTAYLILVERIGA HHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NAAAYLLVITPVVALSVSNVFEDYHWTWYSSVGLLLVALGNMLTRRQRPLAWFKSSTTPA CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC LKA CCC >Mature Secondary Structure AAVMYLLMIFVWGFSWIAIKWQHGEVATEVSIFYRFAIASLLMFAIGFAFNKLQAVKLR HHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHPWFALQGVCLFCLNFIAFYTATHYIASGLTAVIMATAPIFNAIHGRIFYGTPTTRNFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEE LGVSVGLGGIILLFGADLLATQWSQTLVWGLLFSLLGTWFFSIGNMISMRNSRDNVSPFT EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH STAYAMCYGSAALLLIIWFKGLSFSLPLTTSYLGSLFYLAVIASVIGFTAYLILVERIGA HHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NAAAYLLVITPVVALSVSNVFEDYHWTWYSSVGLLLVALGNMLTRRQRPLAWFKSSTTPA CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC LKA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA