Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160876393

Identifier: 160876393

GI number: 160876393

Start: 3874687

End: 3875043

Strand: Direct

Name: 160876393

Synonym: Sbal195_3287

Alternate gene names: NA

Gene position: 3874687-3875043 (Clockwise)

Preceding gene: 160876392

Following gene: 160876397

Centisome position: 72.46

GC content: 31.65

Gene sequence:

>357_bases
ATGCTAATAGATACCGACTTAATTTTTGATGAAATACAGGGATATGAGTTCTATCACAAATGTGAAGTGAAAGCTGTCAT
AGATGACAAAGTAAAGGGGGAAGACGGGGAGCTTTTTGAATTCTATGAAAATATTGAATATTTAATAGAAGAGTTTGATG
AGATCATTGTTTTACGAAAAAAACTAACACTAATGGAACTTGAAGATTTTCGGGACTACATTGAAAAAAAAGGAGATATA
GAAATCGTCAAAACGATAGATAGGCAAATCGAAGAGGCTAAGTTAACGGGGATTTATATTACATTCGCGTGCTTACACAA
TGATTCTTTTTATGATTTACATGTATTTAGATACTAA

Upstream 100 bases:

>100_bases
CAATAGCCAAGCCTTCGTTGCCCTGAAAAAAGAAAGAATACAAATTAACGCCAGCAAAAAATTTCAACAACTAATCCTTA
TTTTTATATGGGGTAATGAA

Downstream 100 bases:

>100_bases
GAATAGTTTTTATCTCACCAAAATTGGGTAGACCATAAAGGTCTTCTTGGTTGCCTTAAAAAGTAGACAAATATTTTTTA
AGGAAAATATAAAAACTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MLIDTDLIFDEIQGYEFYHKCEVKAVIDDKVKGEDGELFEFYENIEYLIEEFDEIIVLRKKLTLMELEDFRDYIEKKGDI
EIVKTIDRQIEEAKLTGIYITFACLHNDSFYDLHVFRY

Sequences:

>Translated_118_residues
MLIDTDLIFDEIQGYEFYHKCEVKAVIDDKVKGEDGELFEFYENIEYLIEEFDEIIVLRKKLTLMELEDFRDYIEKKGDI
EIVKTIDRQIEEAKLTGIYITFACLHNDSFYDLHVFRY
>Mature_118_residues
MLIDTDLIFDEIQGYEFYHKCEVKAVIDDKVKGEDGELFEFYENIEYLIEEFDEIIVLRKKLTLMELEDFRDYIEKKGDI
EIVKTIDRQIEEAKLTGIYITFACLHNDSFYDLHVFRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14238; Mature: 14238

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDTDLIFDEIQGYEFYHKCEVKAVIDDKVKGEDGELFEFYENIEYLIEEFDEIIVLRK
CEECCHHHHHHHCCCCEEHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLTLMELEDFRDYIEKKGDIEIVKTIDRQIEEAKLTGIYITFACLHNDSFYDLHVFRY
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEEEEEECCCEEEEEEEEC
>Mature Secondary Structure
MLIDTDLIFDEIQGYEFYHKCEVKAVIDDKVKGEDGELFEFYENIEYLIEEFDEIIVLRK
CEECCHHHHHHHCCCCEEHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLTLMELEDFRDYIEKKGDIEIVKTIDRQIEEAKLTGIYITFACLHNDSFYDLHVFRY
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEEEEEECCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA