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The map label for this gene is lptF [H]

Identifier: 160876367

GI number: 160876367

Start: 3835156

End: 3836268

Strand: Reverse

Name: lptF [H]

Synonym: Sbal195_3261

Alternate gene names: 160876367

Gene position: 3836268-3835156 (Counterclockwise)

Preceding gene: 160876371

Following gene: 160876366

Centisome position: 71.74

GC content: 49.6

Gene sequence:

>1113_bases
GTGATTGTATTTAAATACCTTATTCGAGAAGTTTTAAAGGCACAAATTGCGGTACTTTTAGTGCTGTTAACTATTTTTAT
TAGCCAGCATTTCGTGCGTATACTGGCCGATGCCTCCGACGGCGATTTTCCCGCCTCTTTAATCATGACCCTGATTGGGC
TTAACTTGCCTTATCTGGTGATCTTAGTCCTGCCGTTAAGTTTGTTCTTGGGGATTTTACTGGCCCACGGCCGTATGTAT
TCCGAAAATGAGATGGTCATTCTCCACGGTGTTGGGGTCAGTGAGTGGTATGTTACCCGCGTGACGCTGATTCTTGCCGT
GATCAATATGTTGTTTACCGGCTATTTATCCCTTTATGTCGCCCCTTGGGCAGAAGAGCAGCAAAACCAAGTGCTCGAAA
AAGCCCAGTCCGAAGCCGGGCTTGCGGCCTTAGTACAAGGGCGTTTTCAGGCGAGCCCGAATGGTCGCGCGGTATTATTT
GTCGAACGTATCGGTAAAGATAACGAGTTAGATAAAGTGTTTGTGGCCCAGTTGCCAGACCCTGATGACGAAACCGGCGT
CACCAATGTGGTGGTGGCCAAGGGTGGGCGAGTGCAGGAAGATAGTTCAGGCGCGCAGCAATTGAACCTGAATGATGGCG
TGCGTTATCAAGGCAGCCCAAAGGCGAAGGACTACCAAATGATCGAATTTGGTGGTTATAAAATGCAAATTAAAGAGCAG
CAAGTCGACGAGCGTCGGCGCAAGTTATCTGCGCTCCCCGTCGATGAACTCGTAAAAGTCGAAGGCGCGGAAGCCGTTGC
CGAATTCCATTGGCGTCTTGCCATTCCGCTGGCGATTCCAATCATGACCTTGATTGCGGTGCCTCTGGCGCGGGTGAATG
TGCGTCAAGGTAAGTTCGCTAAAATGTTCCCAGCAGTACTCTTGTACCTTGGCTATTTTGGCCTCATGGTCGCCGGACGT
AAGGCATTGCAAGATGGGATTATTCCACTGTATTTAGGCATGTGGTGGATCCATATTTCGGCGCTCTTGATGGGGCTGTT
CTTGCTCGGCAAAGATAGGCCTATATTTAGTCGTATCTCGACCCTGTTTGCCCATAAGAAGGTGGCGGCATGA

Upstream 100 bases:

>100_bases
AACCCCTGAAGCTGGTCAGAAAACTATCAAAAGTAAACAGTTTACATGAAAGTTAGTCTGTTACCAGCAAAAAGATAAGT
TTAGAGACCGGATCCTGCCT

Downstream 100 bases:

>100_bases
AGATATTAGACCTTTATATCGCCAGAGTATTGTTAAGCACTTCTGCGCTGTGTTTGCTGGTGTTGACTGGCTTGTCGGGC
ATCATTAAATGGGTTGACCA

Product: permease YjgP/YjgQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MIVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVILVLPLSLFLGILLAHGRMY
SENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLF
VERIGKDNELDKVFVAQLPDPDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQ
QVDERRRKLSALPVDELVKVEGAEAVAEFHWRLAIPLAIPIMTLIAVPLARVNVRQGKFAKMFPAVLLYLGYFGLMVAGR
KALQDGIIPLYLGMWWIHISALLMGLFLLGKDRPIFSRISTLFAHKKVAA

Sequences:

>Translated_370_residues
MIVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVILVLPLSLFLGILLAHGRMY
SENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLF
VERIGKDNELDKVFVAQLPDPDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQ
QVDERRRKLSALPVDELVKVEGAEAVAEFHWRLAIPLAIPIMTLIAVPLARVNVRQGKFAKMFPAVLLYLGYFGLMVAGR
KALQDGIIPLYLGMWWIHISALLMGLFLLGKDRPIFSRISTLFAHKKVAA
>Mature_370_residues
MIVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVILVLPLSLFLGILLAHGRMY
SENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLF
VERIGKDNELDKVFVAQLPDPDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQ
QVDERRRKLSALPVDELVKVEGAEAVAEFHWRLAIPLAIPIMTLIAVPLARVNVRQGKFAKMFPAVLLYLGYFGLMVAGR
KALQDGIIPLYLGMWWIHISALLMGLFLLGKDRPIFSRISTLFAHKKVAA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=366, Percent_Identity=34.9726775956284, Blast_Score=195, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 41133; Mature: 41133

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHH
ILVLPLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV
HHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPD
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEECCC
PDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQ
CCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCEEEEEHHH
QVDERRRKLSALPVDELVKVEGAEAVAEFHWRLAIPLAIPIMTLIAVPLARVNVRQGKFA
HHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
KMFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHISALLMGLFLLGKDRPIFSRIS
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TLFAHKKVAA
HHHHHHHHCC
>Mature Secondary Structure
MIVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHH
ILVLPLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV
HHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPD
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEECCC
PDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQ
CCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCEEEEEHHH
QVDERRRKLSALPVDELVKVEGAEAVAEFHWRLAIPLAIPIMTLIAVPLARVNVRQGKFA
HHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
KMFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHISALLMGLFLLGKDRPIFSRIS
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TLFAHKKVAA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]