| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is bcp [C]
Identifier: 160876351
GI number: 160876351
Start: 3818652
End: 3819299
Strand: Direct
Name: bcp [C]
Synonym: Sbal195_3245
Alternate gene names: 160876351
Gene position: 3818652-3819299 (Clockwise)
Preceding gene: 160876347
Following gene: 160876352
Centisome position: 71.41
GC content: 44.44
Gene sequence:
>648_bases ATGTCAACCATACTAAAAACACTTTGCCTCGCAGGCACACTCTTGCTCACTAGCTTTACTACTCTGGCGCAGCCCATTGC CAGAGATGAGTTTTCCATCAGTCCGCTACTCAATGGTCAGCAAATTCCAAAGGTAAACTTGCAAGATATCAAGGGTAAAA CCGTCGATTTAGCCGAATTAACCCAGCAAAAACCGACCATCTTTTTCTTTTACCGCGGCGGCTGGTGCCCATTTTGTAAC AATCAAATGGGACAGCTAAAAGCGATTGAGCCTGAATTATTAAAAATGGGCTTTCAATTAGTGGGTATTTCACCCGATAC ACCAGCTCAACTTAAGGCTTCGGCGGCAAAAAATGAGCTTAAGTATCTGCTGCTTTCCGATGAAAAAATGCTGGCAGCGC AAGCCTTTGGCTTAGCTTTTTACACAAGCGAAAAGGTCACTGAGATCTATACTTCGCGTCTTCATGTCGATAATCCAATG TGGACGACTCCCGAGGGAGCCAAACGTTTAGTCTTACCTGTGCCCGCCATTTATATTAGCGATGATAAAGGTTTGATTCA TTTCCAATATGTGAATCCTAACTACAAGGTCAGACCCGCACCTAAGCTGATCTTAACCGCCGCTAGTTTGGTGGGATCGC AAGAATAA
Upstream 100 bases:
>100_bases ATAAGCAGATTACACAAGCAGATCTCAGTACTAGAGCAGACAAAAGATAACTGTCGGTGCTTAGAAATGCAGCCATTGAA AGATAACGTTAGGAACGCCC
Downstream 100 bases:
>100_bases ATATCGGTTTATCGACCGCTTTGCTAAACTAGCTCCGCCGCAATCAATATCGTCCAAGTTCAAATAGATAACATCACTTC AGCCCGCGGCGGAGTCATAA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: Acceptor; H2O; oxidized thioredoxin [C]
Alternate protein names: Redoxin; AhpC/Tsa Family Protein; Antioxidant AhpC/TSA Family; Peroxiredoxin; Redoxin Superfamily; Peroxiredoxin-Like Protein; AhpC/Tsa Family Protein Selenocysteine-Containing; Thioredoxin-Dependent Thiol Peroxidase; Peroxiredoxin Family Protein; AhpC-TSA; Alkyl Hydroperoxide Reductase; Peptidase; Peroxiredoxin/AhpC/Tsa Family Protein; Helix-Turn-Helix Fis-Type; Antioxidant AhpC/TSA Family Protein; AhpC/TSA Family Protein
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSTILKTLCLAGTLLLTSFTTLAQPIARDEFSISPLLNGQQIPKVNLQDIKGKTVDLAELTQQKPTIFFFYRGGWCPFCN NQMGQLKAIEPELLKMGFQLVGISPDTPAQLKASAAKNELKYLLLSDEKMLAAQAFGLAFYTSEKVTEIYTSRLHVDNPM WTTPEGAKRLVLPVPAIYISDDKGLIHFQYVNPNYKVRPAPKLILTAASLVGSQE
Sequences:
>Translated_215_residues MSTILKTLCLAGTLLLTSFTTLAQPIARDEFSISPLLNGQQIPKVNLQDIKGKTVDLAELTQQKPTIFFFYRGGWCPFCN NQMGQLKAIEPELLKMGFQLVGISPDTPAQLKASAAKNELKYLLLSDEKMLAAQAFGLAFYTSEKVTEIYTSRLHVDNPM WTTPEGAKRLVLPVPAIYISDDKGLIHFQYVNPNYKVRPAPKLILTAASLVGSQE >Mature_214_residues STILKTLCLAGTLLLTSFTTLAQPIARDEFSISPLLNGQQIPKVNLQDIKGKTVDLAELTQQKPTIFFFYRGGWCPFCNN QMGQLKAIEPELLKMGFQLVGISPDTPAQLKASAAKNELKYLLLSDEKMLAAQAFGLAFYTSEKVTEIYTSRLHVDNPMW TTPEGAKRLVLPVPAIYISDDKGLIHFQYVNPNYKVRPAPKLILTAASLVGSQE
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23807; Mature: 23676
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTILKTLCLAGTLLLTSFTTLAQPIARDEFSISPLLNGQQIPKVNLQDIKGKTVDLAEL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEHHHH TQQKPTIFFFYRGGWCPFCNNQMGQLKAIEPELLKMGFQLVGISPDTPAQLKASAAKNEL HCCCCEEEEEECCCCCCCCCCCCCCEECCCHHHHHCCEEEEEECCCCCHHHHHHHHHCCE KYLLLSDEKMLAAQAFGLAFYTSEKVTEIYTSRLHVDNPMWTTPEGAKRLVLPVPAIYIS EEEEECCCHHHHHHHHHEEEECCHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCEEEEC DDKGLIHFQYVNPNYKVRPAPKLILTAASLVGSQE CCCCEEEEEEECCCCEECCCCHHHHHHHHHHCCCC >Mature Secondary Structure STILKTLCLAGTLLLTSFTTLAQPIARDEFSISPLLNGQQIPKVNLQDIKGKTVDLAEL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEHHHH TQQKPTIFFFYRGGWCPFCNNQMGQLKAIEPELLKMGFQLVGISPDTPAQLKASAAKNEL HCCCCEEEEEECCCCCCCCCCCCCCEECCCHHHHHCCEEEEEECCCCCHHHHHHHHHCCE KYLLLSDEKMLAAQAFGLAFYTSEKVTEIYTSRLHVDNPMWTTPEGAKRLVLPVPAIYIS EEEEECCCHHHHHHHHHEEEECCHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCEEEEC DDKGLIHFQYVNPNYKVRPAPKLILTAASLVGSQE CCCCEEEEEEECCCCEECCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]
Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]
General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA