| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876323
Identifier: 160876323
GI number: 160876323
Start: 3784663
End: 3785805
Strand: Reverse
Name: 160876323
Synonym: Sbal195_3217
Alternate gene names: NA
Gene position: 3785805-3784663 (Counterclockwise)
Preceding gene: 160876327
Following gene: 160876322
Centisome position: 70.8
GC content: 46.81
Gene sequence:
>1143_bases ATGCAAAGACGCAATTTTTTAAAAAGTGCGGCTATTTTGTCGACTGCGGGTTTTATCACGCCGGTACTGGCATCTTCCTC TAAATCGAGTGTCGTTGAACATAGCTCAAGCGATGGACGTCGCCGTTTTATCTTAACCAACACTTACCATCTTGTTGCTC CTGAAGGCTCTGTGGGCGTGGTTAAGTTGTGGATCCCTTTGCCTGAAGACACGCAATTCCAACGGGTCAGTAAGCTGAGT TTCACCGGCAGTTTTAAAGATGCCTATATCAGCTCAAACAACAGCTATGGCGCTAAAACGCTGTTTGCGACTTGGCCAGA TGCTAAAGACAGCATGACAATGACCGTTGAGTTAGACATTGAAACCTTAGATTGGGAACCGCTTAAAAGCGGCGCTTTGA CTCACTATCGCACACCAACACAGATCCACTATCCTGCAGATGTAGAACGTTATTTACTGCCGACTAAACATATGCCAATT AACGGTATTGTGAAGCAAACGGCGGATAAAATTGTGGGTAGCGAAACTGAACCACTGAAACAAGCGCGACTGATATACCT TTGGGTTAGCGCCAATATGTTCCGCGACAATAGTGTGATTGGCTGTGGTACAGGTGATGTGGCCAGCATTTTAGAAAGTG GCAAGTTAGGCGGTAAGTGTACCGACATTAACTCGGTATTTGTGGCGTTAATGCGCGCTGTGGGTATCCCTGCCCGTGAA ATGTTTGGTATTCGCTTAGGTCAGGCGATCAAGATGGGTCATTACTCTAAAAAGGCCTTTGGGAGCGCCGATGACAAAGG GGCTGCCGATGTCAGTGGCGGTCAACATTGCCGCGCTATGTTCTATTTAGCGGGTTATGGTTGGTTGCCCGCCGATCCTG CCGATGTGACTAAAATGCGCTTAACAGAGAAAAAAGAACACAGCGATCCTGCGGTTCAGGCAGTGAATGATTACCTCTTT GGTAACTGGGAAATGAATTGGGTTGGCTTTAACTATGGCCGCGACTTTGATTTATTCCCTGAAGCCGAGCAGACACCACT GAATAACTTTGGTTATCCCTATGCGGAAGTCGATGGCGATCCTGTGAATTATTATGAGCCAAAAGTGTTTGCCTATGACT ACCAGTCAATCGAACAACGCTAA
Upstream 100 bases:
>100_bases ATTGGGTTTGATTGCTGCATAGGGCCATAGAACCTATAATCTTGCTCTGTGATGTTGAGTTCTCTTCTTTCTAACATGAT CCAATAAAAGGAATGTCATA
Downstream 100 bases:
>100_bases GGGACTCTTAGCGACGATGGCCGCCGCAGTGATTGCTGCGGTTGCATCAAGCCTATGCTGTATTGCCCCGCTTATTTATT TGGTGTTCGGGGTGTCGGCC
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MQRRNFLKSAAILSTAGFITPVLASSSKSSVVEHSSSDGRRRFILTNTYHLVAPEGSVGVVKLWIPLPEDTQFQRVSKLS FTGSFKDAYISSNNSYGAKTLFATWPDAKDSMTMTVELDIETLDWEPLKSGALTHYRTPTQIHYPADVERYLLPTKHMPI NGIVKQTADKIVGSETEPLKQARLIYLWVSANMFRDNSVIGCGTGDVASILESGKLGGKCTDINSVFVALMRAVGIPARE MFGIRLGQAIKMGHYSKKAFGSADDKGAADVSGGQHCRAMFYLAGYGWLPADPADVTKMRLTEKKEHSDPAVQAVNDYLF GNWEMNWVGFNYGRDFDLFPEAEQTPLNNFGYPYAEVDGDPVNYYEPKVFAYDYQSIEQR
Sequences:
>Translated_380_residues MQRRNFLKSAAILSTAGFITPVLASSSKSSVVEHSSSDGRRRFILTNTYHLVAPEGSVGVVKLWIPLPEDTQFQRVSKLS FTGSFKDAYISSNNSYGAKTLFATWPDAKDSMTMTVELDIETLDWEPLKSGALTHYRTPTQIHYPADVERYLLPTKHMPI NGIVKQTADKIVGSETEPLKQARLIYLWVSANMFRDNSVIGCGTGDVASILESGKLGGKCTDINSVFVALMRAVGIPARE MFGIRLGQAIKMGHYSKKAFGSADDKGAADVSGGQHCRAMFYLAGYGWLPADPADVTKMRLTEKKEHSDPAVQAVNDYLF GNWEMNWVGFNYGRDFDLFPEAEQTPLNNFGYPYAEVDGDPVNYYEPKVFAYDYQSIEQR >Mature_380_residues MQRRNFLKSAAILSTAGFITPVLASSSKSSVVEHSSSDGRRRFILTNTYHLVAPEGSVGVVKLWIPLPEDTQFQRVSKLS FTGSFKDAYISSNNSYGAKTLFATWPDAKDSMTMTVELDIETLDWEPLKSGALTHYRTPTQIHYPADVERYLLPTKHMPI NGIVKQTADKIVGSETEPLKQARLIYLWVSANMFRDNSVIGCGTGDVASILESGKLGGKCTDINSVFVALMRAVGIPARE MFGIRLGQAIKMGHYSKKAFGSADDKGAADVSGGQHCRAMFYLAGYGWLPADPADVTKMRLTEKKEHSDPAVQAVNDYLF GNWEMNWVGFNYGRDFDLFPEAEQTPLNNFGYPYAEVDGDPVNYYEPKVFAYDYQSIEQR
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 42245; Mature: 42245
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRNFLKSAAILSTAGFITPVLASSSKSSVVEHSSSDGRRRFILTNTYHLVAPEGSVGV CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEEEEEECCCCCEEE VKLWIPLPEDTQFQRVSKLSFTGSFKDAYISSNNSYGAKTLFATWPDAKDSMTMTVELDI EEEEEECCCCCHHHHHHHEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEE ETLDWEPLKSGALTHYRTPTQIHYPADVERYLLPTKHMPINGIVKQTADKIVGSETEPLK EECCCCCCCCCCEEECCCCCEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC QARLIYLWVSANMFRDNSVIGCGTGDVASILESGKLGGKCTDINSVFVALMRAVGIPARE CCEEEEEEEECCEECCCCEEECCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCHHH MFGIRLGQAIKMGHYSKKAFGSADDKGAADVSGGQHCRAMFYLAGYGWLPADPADVTKMR HHHHHHCCHHHCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH LTEKKEHSDPAVQAVNDYLFGNWEMNWVGFNYGRDFDLFPEAEQTPLNNFGYPYAEVDGD HHHHHCCCCHHHHHHHHHEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCC PVNYYEPKVFAYDYQSIEQR CCCCCCCEEEEEEHHHHCCC >Mature Secondary Structure MQRRNFLKSAAILSTAGFITPVLASSSKSSVVEHSSSDGRRRFILTNTYHLVAPEGSVGV CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEEEEEECCCCCEEE VKLWIPLPEDTQFQRVSKLSFTGSFKDAYISSNNSYGAKTLFATWPDAKDSMTMTVELDI EEEEEECCCCCHHHHHHHEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEE ETLDWEPLKSGALTHYRTPTQIHYPADVERYLLPTKHMPINGIVKQTADKIVGSETEPLK EECCCCCCCCCCEEECCCCCEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC QARLIYLWVSANMFRDNSVIGCGTGDVASILESGKLGGKCTDINSVFVALMRAVGIPARE CCEEEEEEEECCEECCCCEEECCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCHHH MFGIRLGQAIKMGHYSKKAFGSADDKGAADVSGGQHCRAMFYLAGYGWLPADPADVTKMR HHHHHHCCHHHCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH LTEKKEHSDPAVQAVNDYLFGNWEMNWVGFNYGRDFDLFPEAEQTPLNNFGYPYAEVDGD HHHHHCCCCHHHHHHHHHEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCC PVNYYEPKVFAYDYQSIEQR CCCCCCCEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]