Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is yggX [C]

Identifier: 160876303

GI number: 160876303

Start: 3768626

End: 3768904

Strand: Direct

Name: yggX [C]

Synonym: Sbal195_3197

Alternate gene names: 160876303

Gene position: 3768626-3768904 (Clockwise)

Preceding gene: 160876302

Following gene: 160876307

Centisome position: 70.48

GC content: 37.63

Gene sequence:

>279_bases
ATGGCGCGTACAGTCAATTGCGTATATTTAAATAAAGAAGCCGACGGCCTAGACTTTCAACTGTATCCAGGTGATTTAGG
TAAGCGCATTTTTGATAACATCAGCAAAGAAGCTTGGGGCCTATGGCAAAAAAAGCAAACCATGCTGATTAACGAAAAGA
AACTCAACATGATGAATGTTGATGATCGTAAGTTTCTTGAAGAACAAATGACCTCTTTCCTCTTTGAAGGTAAAGAAGTA
GAAATTGAAGGTTTTGTGCCTGAAAAAGACCAAGATTAA

Upstream 100 bases:

>100_bases
ACATAAGTCATCCTTCCAAAGTGGGACTCGCCGCCGCCACCGAGCGCGTGCTAGCCAATTTGGGATCACTCGTTCAATCC
GCAGTCAGTAAGGAATAATC

Downstream 100 bases:

>100_bases
TTCTTGTCGTTCACTTAACGATAAAGCCCACAAAAAAGCGCCTTTCGGCGCTTTTTGTTTATTCATCTCGTGAAGAATAA
CTGAGCGTTACTTACGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNVDDRKFLEEQMTSFLFEGKEV
EIEGFVPEKDQD

Sequences:

>Translated_92_residues
MARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNVDDRKFLEEQMTSFLFEGKEV
EIEGFVPEKDQD
>Mature_91_residues
ARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNVDDRKFLEEQMTSFLFEGKEVE
IEGFVPEKDQD

Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes

COG id: COG2924

COG function: function code CO; Fe-S cluster protector protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fe(2+)-trafficking protein family

Homologues:

Organism=Escherichia coli, GI1789332, Length=88, Percent_Identity=69.3181818181818, Blast_Score=138, Evalue=6e-35,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): FETP_SHEB2 (B8E916)

Other databases:

- EMBL:   CP001252
- RefSeq:   YP_002357255.1
- ProteinModelPortal:   B8E916
- SMR:   B8E916
- GeneID:   7089887
- GenomeReviews:   CP001252_GR
- KEGG:   sbp:Sbal223_1324
- HOGENOM:   HBG289800
- OMA:   SKQTMLI
- ProtClustDB:   PRK05408
- HAMAP:   MF_00686
- InterPro:   IPR007457
- PIRSF:   PIRSF029827
- ProDom:   PD029191

Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX

EC number: NA

Molecular weight: Translated: 10841; Mature: 10709

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNV
CCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEECC
DDRKFLEEQMTSFLFEGKEVEIEGFVPEKDQD
CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
ARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNV
CCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEECC
DDRKFLEEQMTSFLFEGKEVEIEGFVPEKDQD
CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA