| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yggX [C]
Identifier: 160876303
GI number: 160876303
Start: 3768626
End: 3768904
Strand: Direct
Name: yggX [C]
Synonym: Sbal195_3197
Alternate gene names: 160876303
Gene position: 3768626-3768904 (Clockwise)
Preceding gene: 160876302
Following gene: 160876307
Centisome position: 70.48
GC content: 37.63
Gene sequence:
>279_bases ATGGCGCGTACAGTCAATTGCGTATATTTAAATAAAGAAGCCGACGGCCTAGACTTTCAACTGTATCCAGGTGATTTAGG TAAGCGCATTTTTGATAACATCAGCAAAGAAGCTTGGGGCCTATGGCAAAAAAAGCAAACCATGCTGATTAACGAAAAGA AACTCAACATGATGAATGTTGATGATCGTAAGTTTCTTGAAGAACAAATGACCTCTTTCCTCTTTGAAGGTAAAGAAGTA GAAATTGAAGGTTTTGTGCCTGAAAAAGACCAAGATTAA
Upstream 100 bases:
>100_bases ACATAAGTCATCCTTCCAAAGTGGGACTCGCCGCCGCCACCGAGCGCGTGCTAGCCAATTTGGGATCACTCGTTCAATCC GCAGTCAGTAAGGAATAATC
Downstream 100 bases:
>100_bases TTCTTGTCGTTCACTTAACGATAAAGCCCACAAAAAAGCGCCTTTCGGCGCTTTTTGTTTATTCATCTCGTGAAGAATAA CTGAGCGTTACTTACGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNVDDRKFLEEQMTSFLFEGKEV EIEGFVPEKDQD
Sequences:
>Translated_92_residues MARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNVDDRKFLEEQMTSFLFEGKEV EIEGFVPEKDQD >Mature_91_residues ARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNVDDRKFLEEQMTSFLFEGKEVE IEGFVPEKDQD
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family
Homologues:
Organism=Escherichia coli, GI1789332, Length=88, Percent_Identity=69.3181818181818, Blast_Score=138, Evalue=6e-35,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): FETP_SHEB2 (B8E916)
Other databases:
- EMBL: CP001252 - RefSeq: YP_002357255.1 - ProteinModelPortal: B8E916 - SMR: B8E916 - GeneID: 7089887 - GenomeReviews: CP001252_GR - KEGG: sbp:Sbal223_1324 - HOGENOM: HBG289800 - OMA: SKQTMLI - ProtClustDB: PRK05408 - HAMAP: MF_00686 - InterPro: IPR007457 - PIRSF: PIRSF029827 - ProDom: PD029191
Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX
EC number: NA
Molecular weight: Translated: 10841; Mature: 10709
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNV CCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEECC DDRKFLEEQMTSFLFEGKEVEIEGFVPEKDQD CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC >Mature Secondary Structure ARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNV CCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEECC DDRKFLEEQMTSFLFEGKEVEIEGFVPEKDQD CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA