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The map label for this gene is fliD [H]

Identifier: 160876184

GI number: 160876184

Start: 3646937

End: 3648301

Strand: Reverse

Name: fliD [H]

Synonym: Sbal195_3075

Alternate gene names: 160876184

Gene position: 3648301-3646937 (Counterclockwise)

Preceding gene: 160876185

Following gene: 160876183

Centisome position: 68.23

GC content: 37.44

Gene sequence:

>1365_bases
ATGGCATTAACAGCAACAGGCATAGGTTCAGGCCTTGATATTGGTAATATCGTTCAGGTATTAGTTGATGCTGAGAAGAC
ACCCAAAGAAGCAATGTTTAATAAGACCGAGGATGCTATTAAAGCTAAAGTCTCGGCAATTGGCTCTTTAAAAAGCGAGT
TAGCTAAGTTTCAAGATGCACTTAAAAAACTTCAGTCTGGAGATGCACTGAATCAACGGAAGGTTTCTACTGGCGATAGT
CAGTATGTTACTGTAACCGCGGATAAAAGCGCAAAAGCTGGTAGTTACAGCATAAAAGTTGAACAATTAGCTGTTAGTCA
TAAAGTGGCTGGAACAAATGTTGCGGATCGTACTCTCGGAGTAGGAGAGGGAACACTAGATTTTGGTATTAATGGTAGCT
CTTTTTCAGTTCCCGTTTTAGCAACTGACTCACTTGATGAGATTGCTAAAAAAGTAAATTCAGCCTCTGGTAATGAGTCC
GTTACTGCAACCGTTATCACGAGTGATGCAGGTAGTCGGATTGTTTTTAGCTCAGATAAATCGGGCGAAGATAATCAAAT
CACAATTACCGCAAATGATACTTCTGGCACTGGTTTGTCAGATATGTTTGGTGCAGGTAATCTTTCAACTCTTCAAGATG
CAAAGAATGCTATTATTTATATTGATGATCAGAAAGTAACGTCCCAGAGCAATGAGATTAAAGGTGCTATAACTGGTGTT
ACCATGAACCTAACCTCTGCTGATGTATCCAAAACAACAACTCTAAAAATTGAACAGGACAATGATGCTGTTAAAGATAA
TGTGAAGGCTTTTGTTGAAGCTTTCAATAGCTTAAATGCCTCGATCGATAAAATGTCAGCATATGATAAAGATAAAAAAA
CTGCATCGGCTTTGCAGGGTGATTCAATGATTCGTTCAATTGAATCACAGTTACGGAATATGATCAGTGAGAGAGTTACT
ACAGATTCTGGTAATGTAGCACTTTACGATATAGGTATCAAAACAGATAAATATGGTAAATTATCAATCGATGAAACTAA
GCTTGATAAAGTTATAAATGAAGATATGTCAAGTGTTGAACAGTTATTTGCTACCAAAGATACGGGTTTAGCAAATAGAT
TAGATAACTTATCGAATAATTATGTTAAGAGCGATGGTTTAATCGCTGGCCGTCAAAATTCTTACACGAGCCAACAGAAA
CGCCTTGATGAACAAAGAGAGGCTTTTTCTTTAAAAATGGAACAATTAACTGCACGCTTAACTAAACAGTTCAATGCAAT
GGATTTGGTTGTTGGGCAACTTAATCAGCAAAGTTCTGGTTTAGCAGATCGCTTAAACTCACTTCCAGGGGTTGTATCTA
AATAG

Upstream 100 bases:

>100_bases
AGCATTAGCTGAAAAGTTGTCAGAAGTAACGGGTCTTCTGATGAAGACAGAAGCATAAATTGCTAGTTCTTCAGCGAGAG
AGTAGTTAAAGGGGAATATT

Downstream 100 bases:

>100_bases
TCGCTTTATTACGGAAGTTGGGGCGTTGAATGTGCAAAGAATTAGATGAACTTAACAAATCTCTCTATGAAATACTTCAT
AAACTTACTATCACTCCTGC

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MALTATGIGSGLDIGNIVQVLVDAEKTPKEAMFNKTEDAIKAKVSAIGSLKSELAKFQDALKKLQSGDALNQRKVSTGDS
QYVTVTADKSAKAGSYSIKVEQLAVSHKVAGTNVADRTLGVGEGTLDFGINGSSFSVPVLATDSLDEIAKKVNSASGNES
VTATVITSDAGSRIVFSSDKSGEDNQITITANDTSGTGLSDMFGAGNLSTLQDAKNAIIYIDDQKVTSQSNEIKGAITGV
TMNLTSADVSKTTTLKIEQDNDAVKDNVKAFVEAFNSLNASIDKMSAYDKDKKTASALQGDSMIRSIESQLRNMISERVT
TDSGNVALYDIGIKTDKYGKLSIDETKLDKVINEDMSSVEQLFATKDTGLANRLDNLSNNYVKSDGLIAGRQNSYTSQQK
RLDEQREAFSLKMEQLTARLTKQFNAMDLVVGQLNQQSSGLADRLNSLPGVVSK

Sequences:

>Translated_454_residues
MALTATGIGSGLDIGNIVQVLVDAEKTPKEAMFNKTEDAIKAKVSAIGSLKSELAKFQDALKKLQSGDALNQRKVSTGDS
QYVTVTADKSAKAGSYSIKVEQLAVSHKVAGTNVADRTLGVGEGTLDFGINGSSFSVPVLATDSLDEIAKKVNSASGNES
VTATVITSDAGSRIVFSSDKSGEDNQITITANDTSGTGLSDMFGAGNLSTLQDAKNAIIYIDDQKVTSQSNEIKGAITGV
TMNLTSADVSKTTTLKIEQDNDAVKDNVKAFVEAFNSLNASIDKMSAYDKDKKTASALQGDSMIRSIESQLRNMISERVT
TDSGNVALYDIGIKTDKYGKLSIDETKLDKVINEDMSSVEQLFATKDTGLANRLDNLSNNYVKSDGLIAGRQNSYTSQQK
RLDEQREAFSLKMEQLTARLTKQFNAMDLVVGQLNQQSSGLADRLNSLPGVVSK
>Mature_453_residues
ALTATGIGSGLDIGNIVQVLVDAEKTPKEAMFNKTEDAIKAKVSAIGSLKSELAKFQDALKKLQSGDALNQRKVSTGDSQ
YVTVTADKSAKAGSYSIKVEQLAVSHKVAGTNVADRTLGVGEGTLDFGINGSSFSVPVLATDSLDEIAKKVNSASGNESV
TATVITSDAGSRIVFSSDKSGEDNQITITANDTSGTGLSDMFGAGNLSTLQDAKNAIIYIDDQKVTSQSNEIKGAITGVT
MNLTSADVSKTTTLKIEQDNDAVKDNVKAFVEAFNSLNASIDKMSAYDKDKKTASALQGDSMIRSIESQLRNMISERVTT
DSGNVALYDIGIKTDKYGKLSIDETKLDKVINEDMSSVEQLFATKDTGLANRLDNLSNNYVKSDGLIAGRQNSYTSQQKR
LDEQREAFSLKMEQLTARLTKQFNAMDLVVGQLNQQSSGLADRLNSLPGVVSK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=476, Percent_Identity=28.3613445378151, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48344; Mature: 48213

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTATGIGSGLDIGNIVQVLVDAEKTPKEAMFNKTEDAIKAKVSAIGSLKSELAKFQDA
CEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKKLQSGDALNQRKVSTGDSQYVTVTADKSAKAGSYSIKVEQLAVSHKVAGTNVADRTLG
HHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCC
VGEGTLDFGINGSSFSVPVLATDSLDEIAKKVNSASGNESVTATVITSDAGSRIVFSSDK
CCCCCEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCC
SGEDNQITITANDTSGTGLSDMFGAGNLSTLQDAKNAIIYIDDQKVTSQSNEIKGAITGV
CCCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHCCCEEEEEECCHHCCCCCCCCEEEEEE
TMNLTSADVSKTTTLKIEQDNDAVKDNVKAFVEAFNSLNASIDKMSAYDKDKKTASALQG
EEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHH
DSMIRSIESQLRNMISERVTTDSGNVALYDIGIKTDKYGKLSIDETKLDKVINEDMSSVE
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHH
QLFATKDTGLANRLDNLSNNYVKSDGLIAGRQNSYTSQQKRLDEQREAFSLKMEQLTARL
HHHHCCCCCHHHHHHHHCCCEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TKQFNAMDLVVGQLNQQSSGLADRLNSLPGVVSK
HHHCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
ALTATGIGSGLDIGNIVQVLVDAEKTPKEAMFNKTEDAIKAKVSAIGSLKSELAKFQDA
EEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKKLQSGDALNQRKVSTGDSQYVTVTADKSAKAGSYSIKVEQLAVSHKVAGTNVADRTLG
HHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCC
VGEGTLDFGINGSSFSVPVLATDSLDEIAKKVNSASGNESVTATVITSDAGSRIVFSSDK
CCCCCEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCC
SGEDNQITITANDTSGTGLSDMFGAGNLSTLQDAKNAIIYIDDQKVTSQSNEIKGAITGV
CCCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHCCCEEEEEECCHHCCCCCCCCEEEEEE
TMNLTSADVSKTTTLKIEQDNDAVKDNVKAFVEAFNSLNASIDKMSAYDKDKKTASALQG
EEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHH
DSMIRSIESQLRNMISERVTTDSGNVALYDIGIKTDKYGKLSIDETKLDKVINEDMSSVE
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHH
QLFATKDTGLANRLDNLSNNYVKSDGLIAGRQNSYTSQQKRLDEQREAFSLKMEQLTARL
HHHHCCCCCHHHHHHHHCCCEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TKQFNAMDLVVGQLNQQSSGLADRLNSLPGVVSK
HHHCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]