Click here to switch to the map view.

The map label for this gene is fliS [H]

Identifier: 160876182

GI number: 160876182

Start: 3646167

End: 3646577

Strand: Reverse

Name: fliS [H]

Synonym: Sbal195_3073

Alternate gene names: 160876182

Gene position: 3646577-3646167 (Counterclockwise)

Preceding gene: 160876183

Following gene: 160876181

Centisome position: 68.19

GC content: 36.74

Gene sequence:

>411_bases
ATGAGGGGTTCACTTCAGTCTTATCGTAAAGTTTCATTAGACAGTGAGATTTCTGTTGCTTCGCCGCATCGCATTATCCA
GTTAATGTTTAATGGAGCACTGCAACGTCTAGCGCAGACTCGTTATGCTATTGAGCAGAATGATTTAGCGAGTAAAGGCA
TCTATATTGGTAAAGCAATTGGAATTATTAATGGTTTGAATAATAGCTTGAATATGGATGCTGGTGGACAGATCGCAAGA
AATTTGAGTGACCTTTATGATTTTATGCTTCGTAAAATTACAGAGGCAAATTTAAATAATGATGTGAAAGCAATCGATGA
TGTATGCGATATTTTACGTACTATCAAAGAAGGCTGGGATGCAATTCCTGCAGATAAACATAATATATCTGCACATTCTG
AAGCTGGTTAA

Upstream 100 bases:

>100_bases
TGTTATACTGGCGGAGAGACGGGCTTTATTACACGCAGCGAGTAAAAATAAGCGTCAAATAAATGTTTATAAAGCAATTG
ATTCAAATAGGTAGGTGTTT

Downstream 100 bases:

>100_bases
TATCGTGATTTATGATTAAAAAAAGACGCACTGGTTGCGTCTTTTTTTTGGCTTGAAGTCAAGTTTTTGACGTTTTTAAC
TAGAATCATGGCATAAATGA

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRGSLQSYRKVSLDSEISVASPHRIIQLMFNGALQRLAQTRYAIEQNDLASKGIYIGKAIGIINGLNNSLNMDAGGQIAR
NLSDLYDFMLRKITEANLNNDVKAIDDVCDILRTIKEGWDAIPADKHNISAHSEAG

Sequences:

>Translated_136_residues
MRGSLQSYRKVSLDSEISVASPHRIIQLMFNGALQRLAQTRYAIEQNDLASKGIYIGKAIGIINGLNNSLNMDAGGQIAR
NLSDLYDFMLRKITEANLNNDVKAIDDVCDILRTIKEGWDAIPADKHNISAHSEAG
>Mature_136_residues
MRGSLQSYRKVSLDSEISVASPHRIIQLMFNGALQRLAQTRYAIEQNDLASKGIYIGKAIGIINGLNNSLNMDAGGQIAR
NLSDLYDFMLRKITEANLNNDVKAIDDVCDILRTIKEGWDAIPADKHNISAHSEAG

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=115, Percent_Identity=33.9130434782609, Blast_Score=84, Evalue=5e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 14972; Mature: 14972

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSLQSYRKVSLDSEISVASPHRIIQLMFNGALQRLAQTRYAIEQNDLASKGIYIGKAI
CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHH
GIINGLNNSLNMDAGGQIARNLSDLYDFMLRKITEANLNNDVKAIDDVCDILRTIKEGWD
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
AIPADKHNISAHSEAG
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRGSLQSYRKVSLDSEISVASPHRIIQLMFNGALQRLAQTRYAIEQNDLASKGIYIGKAI
CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHH
GIINGLNNSLNMDAGGQIARNLSDLYDFMLRKITEANLNNDVKAIDDVCDILRTIKEGWD
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
AIPADKHNISAHSEAG
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]