| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is flhB [H]
Identifier: 160876164
GI number: 160876164
Start: 3627858
End: 3628988
Strand: Reverse
Name: flhB [H]
Synonym: Sbal195_3055
Alternate gene names: 160876164
Gene position: 3628988-3627858 (Counterclockwise)
Preceding gene: 160876165
Following gene: 160876163
Centisome position: 67.87
GC content: 45.53
Gene sequence:
>1131_bases ATGGCTGAAGAATCAAGCGGTGAACGCAGTGAGGAGCCCACTGGGAGGCGTCTTGAACAGGCGCGGGAAAAAGGGCAGAT TGCGCGTTCGAAAGAACTAGGTACAGCAGCAGTATTAATTTCGGCAGCATGTGGTTTTTATATGCTAGGTCCGAGTCTTG CCACGAGTTTAACTCGGGTGTTTGAGACGGTTTTTACCATGGATAGGGCGCAAATCTTTGATACTGAAGAAATGTTCAAT GTCTGGGGCGTTGTCGCGAGCGAAATCGCCTGGCCAATGGCAAAAATTATGCTGTTGATCGTTGTTGTTGCTTTTATCGG CAACGTTGCCTTAGGTGGGATGAATTTCTCGACCCAAGCTATGATGCCTAAGGCCAGTAAAATGAGCCCCGCAGCAGGTC TGAAGCGTATGTTCGGCGTGCAGGCGTTAGTCGAGCTGACAAAGGGTATTGCCAAGTTTTCTGTGGTGGCATTTTCGGCA TATTTATTACTGAGCTTTTATTTTAACGATATTATGTTGCTGTCTAGCGACCATCTTCCCGGTAATGTCTACCACGCATT AGATTTACTCGTGTGGATGTTTATCTTGTTATGCTCCTCTATTTTATTAATTGTCGTCATCGATGTGCCGTTCCAAATTT GGAATCATAACAAGCAACTTAAGATGACCAAACAAGAAGTAAAAGATGAATATAAGGACACTGAAGGGAAACCAGAAGTA AAAGGGCGGGTACGACAGATGCAACGCGAGTTAGCCCAGCGTCGAATGATGACTGAAGTACCCAATGCCGATGTCATCGT TGTTAACCCCGAGCATTTTGCAGTAGCGATTAAATACGATGTACAGCGCTCCGCCGCTCCCTTTGTGATTGCCAAAGGCG TTGATGACGTTGCATTTAAAATTCGTGAGATTGCTCGCGAACACAATATTGCCATTGTCTCTGCACCACCTCTTGCGAGG GCGATATACCATACGACTAAGTTAGATCAACAAATCCCCGAAGGACTATTTACTGCCGTGGCACAGATTTTGGCTTATGT TTTCCAGTTACGTCAATATCAGAAAGGACGTGGTCGCAAACCTATTCCTGTCCCGCTTAATCAGCCCATCCCTGATGAGT TAAAATATTAA
Upstream 100 bases:
>100_bases TTTTGATGAAGTATGGGCCGCGGCTCAAGTGCTGCTTTGCGATATGTTAGCGCTTCAATGTAACGCAGATGGCTTGATAT GACGGTATTAGGAGCAGCCC
Downstream 100 bases:
>100_bases GTTAGCAGCATCTGACAATCGTGAGCGAAAGTCAGACAATGTCACTTTGTATGGATATTCCACTGTTATTTCTTCTTTAT ATCAATAAGTCACTGGTATA
Product: flagellar biosynthesis protein FlhB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MAEESSGERSEEPTGRRLEQAREKGQIARSKELGTAAVLISAACGFYMLGPSLATSLTRVFETVFTMDRAQIFDTEEMFN VWGVVASEIAWPMAKIMLLIVVVAFIGNVALGGMNFSTQAMMPKASKMSPAAGLKRMFGVQALVELTKGIAKFSVVAFSA YLLLSFYFNDIMLLSSDHLPGNVYHALDLLVWMFILLCSSILLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEV KGRVRQMQRELAQRRMMTEVPNADVIVVNPEHFAVAIKYDVQRSAAPFVIAKGVDDVAFKIREIAREHNIAIVSAPPLAR AIYHTTKLDQQIPEGLFTAVAQILAYVFQLRQYQKGRGRKPIPVPLNQPIPDELKY
Sequences:
>Translated_376_residues MAEESSGERSEEPTGRRLEQAREKGQIARSKELGTAAVLISAACGFYMLGPSLATSLTRVFETVFTMDRAQIFDTEEMFN VWGVVASEIAWPMAKIMLLIVVVAFIGNVALGGMNFSTQAMMPKASKMSPAAGLKRMFGVQALVELTKGIAKFSVVAFSA YLLLSFYFNDIMLLSSDHLPGNVYHALDLLVWMFILLCSSILLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEV KGRVRQMQRELAQRRMMTEVPNADVIVVNPEHFAVAIKYDVQRSAAPFVIAKGVDDVAFKIREIAREHNIAIVSAPPLAR AIYHTTKLDQQIPEGLFTAVAQILAYVFQLRQYQKGRGRKPIPVPLNQPIPDELKY >Mature_375_residues AEESSGERSEEPTGRRLEQAREKGQIARSKELGTAAVLISAACGFYMLGPSLATSLTRVFETVFTMDRAQIFDTEEMFNV WGVVASEIAWPMAKIMLLIVVVAFIGNVALGGMNFSTQAMMPKASKMSPAAGLKRMFGVQALVELTKGIAKFSVVAFSAY LLLSFYFNDIMLLSSDHLPGNVYHALDLLVWMFILLCSSILLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEVK GRVRQMQRELAQRRMMTEVPNADVIVVNPEHFAVAIKYDVQRSAAPFVIAKGVDDVAFKIREIAREHNIAIVSAPPLARA IYHTTKLDQQIPEGLFTAVAQILAYVFQLRQYQKGRGRKPIPVPLNQPIPDELKY
Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]
COG id: COG1377
COG function: function code NU; Flagellar biosynthesis pathway, component FlhB
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III secretion exporter family [H]
Homologues:
Organism=Escherichia coli, GI1788188, Length=376, Percent_Identity=39.6276595744681, Blast_Score=254, Evalue=6e-69,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006136 - InterPro: IPR006135 [H]
Pfam domain/function: PF01312 Bac_export_2 [H]
EC number: NA
Molecular weight: Translated: 42070; Mature: 41939
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEESSGERSEEPTGRRLEQAREKGQIARSKELGTAAVLISAACGFYMLGPSLATSLTRV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH FETVFTMDRAQIFDTEEMFNVWGVVASEIAWPMAKIMLLIVVVAFIGNVALGGMNFSTQA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH MMPKASKMSPAAGLKRMFGVQALVELTKGIAKFSVVAFSAYLLLSFYFNDIMLLSSDHLP HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC GNVYHALDLLVWMFILLCSSILLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH KGRVRQMQRELAQRRMMTEVPNADVIVVNPEHFAVAIKYDVQRSAAPFVIAKGVDDVAFK HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCCCEEEECCCHHHHHH IREIAREHNIAIVSAPPLARAIYHTTKLDQQIPEGLFTAVAQILAYVFQLRQYQKGRGRK HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIPVPLNQPIPDELKY CCCCCCCCCCCHHCCC >Mature Secondary Structure AEESSGERSEEPTGRRLEQAREKGQIARSKELGTAAVLISAACGFYMLGPSLATSLTRV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH FETVFTMDRAQIFDTEEMFNVWGVVASEIAWPMAKIMLLIVVVAFIGNVALGGMNFSTQA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH MMPKASKMSPAAGLKRMFGVQALVELTKGIAKFSVVAFSAYLLLSFYFNDIMLLSSDHLP HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC GNVYHALDLLVWMFILLCSSILLIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH KGRVRQMQRELAQRRMMTEVPNADVIVVNPEHFAVAIKYDVQRSAAPFVIAKGVDDVAFK HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCCCEEEECCCHHHHHH IREIAREHNIAIVSAPPLARAIYHTTKLDQQIPEGLFTAVAQILAYVFQLRQYQKGRGRK HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIPVPLNQPIPDELKY CCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8002587; 11677609; 3298217 [H]