Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160876149

Identifier: 160876149

GI number: 160876149

Start: 3611494

End: 3614073

Strand: Direct

Name: 160876149

Synonym: Sbal195_3040

Alternate gene names: NA

Gene position: 3611494-3614073 (Clockwise)

Preceding gene: 160876146

Following gene: 160876150

Centisome position: 67.54

GC content: 47.48

Gene sequence:

>2580_bases
ATGGAGTCGATTCCACTTGTTAGCAGTCAAAACCCGCAGTTACACACTGCGACAGCCCAAGCTGATGCTCTCAGTGCTAC
TCCGCGTGCTATTCCTGCTCAGGTGCAAACCTCCCCTGAGGGAGATAGTATTATTCTAAACGGTACAGAATATAATTTAA
AGCTTGTTAACGCTCAGCAGCGGCAAATATTATTGACGGCTAATACTTTCCTCGTCACGCCCAATACGCAAAACACTCCA
CCGACAGCTGCAGCGACTCAAGGTACCATCAGCCAACTGCTTGCCTTAGCCACGCCTATTGCTCTGAAAGTCCCTGAAGC
TGTTATCAATTTGGCGCAACAAAATGGCATATCTCAGGCACAGCTTTCAGCTCTTGCGGCTCGTACTCAAGGCTATCCGT
TACCGAACGTCACCATTATTAACAAAGAGTTTCATTTTGCTAATGGCACTGTTGTAGCACAAGATCCTGGACCTCAGCTG
AATCAAGGAGAATTCTTAGCAAAAATAGCCTTTCAGCAAGGGCGGCCTATTTTATTACTCACCCCAATACAGAGCAAACT
CGAAATCGTTATTGGGGCGCCAGTAAATGAAACTCAGGTTCCCACAAATAAATCGTCTTCTGACATTGTGATCGCTAAAG
TCGAACCGGTTCAGATCATCGCCTCCTTTTTAAAAAAACTTGAAACTATCGTTTCTTTACCTGAGCCGACAAAACAAACT
GCCACGACAAAGGTAGATACGCCGGCAACTATGCTAAGCGTTAGCACAGCTCAACCAGAGAAGTTAGATATGAGTACAGA
AGGCGTCAAAAACAAAACAACAAACGATGCTGGCATACCGCTTTCGAATACCAATAAAGGGCCTGTCACGAACCTTAACG
GCTCATCGGGCTCTTCAAGTTCGCTAAATTCACAGACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCA
ACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGC
AACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGG
CAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAG
GCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCA
GGCAACGCAGGCAACGCAGGCAACGCAGGCAACGCAGGCAACTAAAACAAATGACGCCATACCTGTCAAAGTAACAATGC
CAACTATGTTGAGTGCTCGCGGCTCAAATCAGTCACTCGCTACGCCATCTGTTCTGATTAATTCAACACAATCACAAATA
AATCAACCTAGCTCTGCCACCGCGACCATCGAGCAAACAACAAGGAACTCATCCCCATTGGGATTTAGCCTTGCAACGGC
ATCGTTAAATGTCCCGTCTCAAGACCCTAAAGTTAATAATGTGTTGGTAATGCAAAACCCCAAGAGTTTGGCTCCAACAC
CTCCGCTTACAAATGTAGCCACTAATATTGGTGCTCAAAATGAAGAAGCTGTGGAGGAAATTGCTGCGGTGAGTCCAAAA
AATATTTTAGGGCTCAATACGCAAAAAAATGAACGGCATGGGAATGATACCAAAACTGACAGCACTATGAAGGTTGCTGA
TGTTTTGCAAAAAGCATTCAATAAAGCGGGAGCACTTCCTGTTGAACTATCTCGTTCTAATAACAGCTCAAATTTAGCCT
CAGAGTTGTTAAAGCACTTACCGCATATAGGATTACCACCACTGAGCCAGCTAAATGATTTAGATGAGCTTAAAGCCAAT
ATTCTCGGACTAGCAAGTCTTAACCTTGCCGCACCTCAGTCAAATCAAGCCTCAATGTTTATGAATGCGAGTGCGATTAC
CTCATTATTTCAACTGCTACTAGGCTTTAAAGCTAATAATAGTTCGAATTCAATGAGTAAGAAGCTCGCAGATTATCTTG
ATCAACTGCAAGCCAAAGTTGGCTTTTCCGCTAAACAACTTGGCCAACTGAGCAAAGCAGGCGGTCTTGATAGCATGGGA
CAACTAGCCTCTAACTTGCATTTATACCAACAGGCAAGCAATGAGAGCGCGGGCAATTTAGTGTGGTTCTTTGCCCTACC
CTATGGCATTAACCAACGTCATGAGCAACTGGAAGGGAAATTTGAGCAAGAAGCGGATCCTGATGATCCAGAGAAAAAAG
CCGGATGGCGTTTACAGCTCAAATTTAATTTAGCACAAGGTCCGCTACTGATTGCAGCTCAACAGCACAATCAACAATTG
GATATCCAGTTTAAAGGCAATAGCCAAATGCTACTTAATAAGGTCAACAACTTTTTAACGCCCTTAAGCCAAAAATTGTC
ACAGCTAGGGTTTACGCCAGGTGAACTCTCGACGCAAATAGCGCAAGTGCCAGCAACCTTATTACCGGGTGATCATTTCC
TCGTAAAGACAAAAGCTTAG

Upstream 100 bases:

>100_bases
GTTGTCACAAGGCGCATAAGCATACTTGGCAAAAAAAATTGGTCAATTGTTAATTTTACTAAACGAATATATCGCCAGAT
AAACTATATAAGGTCACTAA

Downstream 100 bases:

>100_bases
CTAGAAAAAACACCTAAGCAGACATTGAATCCATCATCTAATTTTAGGAAGAACCAAATGAGCGAAGAGAGTGAACCGAA
GCAAGCTGTCGCGCTGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 859; Mature: 859

Protein sequence:

>859_residues
MESIPLVSSQNPQLHTATAQADALSATPRAIPAQVQTSPEGDSIILNGTEYNLKLVNAQQRQILLTANTFLVTPNTQNTP
PTAAATQGTISQLLALATPIALKVPEAVINLAQQNGISQAQLSALAARTQGYPLPNVTIINKEFHFANGTVVAQDPGPQL
NQGEFLAKIAFQQGRPILLLTPIQSKLEIVIGAPVNETQVPTNKSSSDIVIAKVEPVQIIASFLKKLETIVSLPEPTKQT
ATTKVDTPATMLSVSTAQPEKLDMSTEGVKNKTTNDAGIPLSNTNKGPVTNLNGSSGSSSSLNSQTQATQATQATQATQA
TQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQ
ATQATQATQATQATQATQATQATQATQATQATQATQATQATKTNDAIPVKVTMPTMLSARGSNQSLATPSVLINSTQSQI
NQPSSATATIEQTTRNSSPLGFSLATASLNVPSQDPKVNNVLVMQNPKSLAPTPPLTNVATNIGAQNEEAVEEIAAVSPK
NILGLNTQKNERHGNDTKTDSTMKVADVLQKAFNKAGALPVELSRSNNSSNLASELLKHLPHIGLPPLSQLNDLDELKAN
ILGLASLNLAAPQSNQASMFMNASAITSLFQLLLGFKANNSSNSMSKKLADYLDQLQAKVGFSAKQLGQLSKAGGLDSMG
QLASNLHLYQQASNESAGNLVWFFALPYGINQRHEQLEGKFEQEADPDDPEKKAGWRLQLKFNLAQGPLLIAAQQHNQQL
DIQFKGNSQMLLNKVNNFLTPLSQKLSQLGFTPGELSTQIAQVPATLLPGDHFLVKTKA

Sequences:

>Translated_859_residues
MESIPLVSSQNPQLHTATAQADALSATPRAIPAQVQTSPEGDSIILNGTEYNLKLVNAQQRQILLTANTFLVTPNTQNTP
PTAAATQGTISQLLALATPIALKVPEAVINLAQQNGISQAQLSALAARTQGYPLPNVTIINKEFHFANGTVVAQDPGPQL
NQGEFLAKIAFQQGRPILLLTPIQSKLEIVIGAPVNETQVPTNKSSSDIVIAKVEPVQIIASFLKKLETIVSLPEPTKQT
ATTKVDTPATMLSVSTAQPEKLDMSTEGVKNKTTNDAGIPLSNTNKGPVTNLNGSSGSSSSLNSQTQATQATQATQATQA
TQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQ
ATQATQATQATQATQATQATQATQATQATQATQATQATQATKTNDAIPVKVTMPTMLSARGSNQSLATPSVLINSTQSQI
NQPSSATATIEQTTRNSSPLGFSLATASLNVPSQDPKVNNVLVMQNPKSLAPTPPLTNVATNIGAQNEEAVEEIAAVSPK
NILGLNTQKNERHGNDTKTDSTMKVADVLQKAFNKAGALPVELSRSNNSSNLASELLKHLPHIGLPPLSQLNDLDELKAN
ILGLASLNLAAPQSNQASMFMNASAITSLFQLLLGFKANNSSNSMSKKLADYLDQLQAKVGFSAKQLGQLSKAGGLDSMG
QLASNLHLYQQASNESAGNLVWFFALPYGINQRHEQLEGKFEQEADPDDPEKKAGWRLQLKFNLAQGPLLIAAQQHNQQL
DIQFKGNSQMLLNKVNNFLTPLSQKLSQLGFTPGELSTQIAQVPATLLPGDHFLVKTKA
>Mature_859_residues
MESIPLVSSQNPQLHTATAQADALSATPRAIPAQVQTSPEGDSIILNGTEYNLKLVNAQQRQILLTANTFLVTPNTQNTP
PTAAATQGTISQLLALATPIALKVPEAVINLAQQNGISQAQLSALAARTQGYPLPNVTIINKEFHFANGTVVAQDPGPQL
NQGEFLAKIAFQQGRPILLLTPIQSKLEIVIGAPVNETQVPTNKSSSDIVIAKVEPVQIIASFLKKLETIVSLPEPTKQT
ATTKVDTPATMLSVSTAQPEKLDMSTEGVKNKTTNDAGIPLSNTNKGPVTNLNGSSGSSSSLNSQTQATQATQATQATQA
TQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQ
ATQATQATQATQATQATQATQATQATQATQATQATQATQATKTNDAIPVKVTMPTMLSARGSNQSLATPSVLINSTQSQI
NQPSSATATIEQTTRNSSPLGFSLATASLNVPSQDPKVNNVLVMQNPKSLAPTPPLTNVATNIGAQNEEAVEEIAAVSPK
NILGLNTQKNERHGNDTKTDSTMKVADVLQKAFNKAGALPVELSRSNNSSNLASELLKHLPHIGLPPLSQLNDLDELKAN
ILGLASLNLAAPQSNQASMFMNASAITSLFQLLLGFKANNSSNSMSKKLADYLDQLQAKVGFSAKQLGQLSKAGGLDSMG
QLASNLHLYQQASNESAGNLVWFFALPYGINQRHEQLEGKFEQEADPDDPEKKAGWRLQLKFNLAQGPLLIAAQQHNQQL
DIQFKGNSQMLLNKVNNFLTPLSQKLSQLGFTPGELSTQIAQVPATLLPGDHFLVKTKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90519; Mature: 90519

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESIPLVSSQNPQLHTATAQADALSATPRAIPAQVQTSPEGDSIILNGTEYNLKLVNAQQ
CCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCEEECCCCCCEEEEECCCEEEEEECCCC
RQILLTANTFLVTPNTQNTPPTAAATQGTISQLLALATPIALKVPEAVINLAQQNGISQA
CEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHCCCCHH
QLSALAARTQGYPLPNVTIINKEFHFANGTVVAQDPGPQLNQGEFLAKIAFQQGRPILLL
HHHHHHHHHCCCCCCCEEEEECEEEECCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEE
TPIQSKLEIVIGAPVNETQVPTNKSSSDIVIAKVEPVQIIASFLKKLETIVSLPEPTKQT
CCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCC
ATTKVDTPATMLSVSTAQPEKLDMSTEGVKNKTTNDAGIPLSNTNKGPVTNLNGSSGSSS
CCEECCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SLNSQTQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATQATQATQATQATQATQATKTNDAIPVKVTMPTMLSARGSNQSLATPSVLINSTQSQI
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCCCCCCHHEEECCHHHC
NQPSSATATIEQTTRNSSPLGFSLATASLNVPSQDPKVNNVLVMQNPKSLAPTPPLTNVA
CCCCCCEEEEHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHH
TNIGAQNEEAVEEIAAVSPKNILGLNTQKNERHGNDTKTDSTMKVADVLQKAFNKAGALP
HHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
VELSRSNNSSNLASELLKHLPHIGLPPLSQLNDLDELKANILGLASLNLAAPQSNQASMF
EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHEEEEEEECCCCCCCCCEE
MNASAITSLFQLLLGFKANNSSNSMSKKLADYLDQLQAKVGFSAKQLGQLSKAGGLDSMG
ECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHH
QLASNLHLYQQASNESAGNLVWFFALPYGINQRHEQLEGKFEQEADPDDPEKKAGWRLQL
HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHCCEEEEE
KFNLAQGPLLIAAQQHNQQLDIQFKGNSQMLLNKVNNFLTPLSQKLSQLGFTPGELSTQI
EEEECCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AQVPATLLPGDHFLVKTKA
HHCCHHHCCCCEEEEEECC
>Mature Secondary Structure
MESIPLVSSQNPQLHTATAQADALSATPRAIPAQVQTSPEGDSIILNGTEYNLKLVNAQQ
CCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCEEECCCCCCEEEEECCCEEEEEECCCC
RQILLTANTFLVTPNTQNTPPTAAATQGTISQLLALATPIALKVPEAVINLAQQNGISQA
CEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHCCCCHH
QLSALAARTQGYPLPNVTIINKEFHFANGTVVAQDPGPQLNQGEFLAKIAFQQGRPILLL
HHHHHHHHHCCCCCCCEEEEECEEEECCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEE
TPIQSKLEIVIGAPVNETQVPTNKSSSDIVIAKVEPVQIIASFLKKLETIVSLPEPTKQT
CCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCC
ATTKVDTPATMLSVSTAQPEKLDMSTEGVKNKTTNDAGIPLSNTNKGPVTNLNGSSGSSS
CCEECCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SLNSQTQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQATQAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATQATQATQATQATQATQATKTNDAIPVKVTMPTMLSARGSNQSLATPSVLINSTQSQI
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCCCCCCHHEEECCHHHC
NQPSSATATIEQTTRNSSPLGFSLATASLNVPSQDPKVNNVLVMQNPKSLAPTPPLTNVA
CCCCCCEEEEHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHH
TNIGAQNEEAVEEIAAVSPKNILGLNTQKNERHGNDTKTDSTMKVADVLQKAFNKAGALP
HHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
VELSRSNNSSNLASELLKHLPHIGLPPLSQLNDLDELKANILGLASLNLAAPQSNQASMF
EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHEEEEEEECCCCCCCCCEE
MNASAITSLFQLLLGFKANNSSNSMSKKLADYLDQLQAKVGFSAKQLGQLSKAGGLDSMG
ECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHH
QLASNLHLYQQASNESAGNLVWFFALPYGINQRHEQLEGKFEQEADPDDPEKKAGWRLQL
HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHCCEEEEE
KFNLAQGPLLIAAQQHNQQLDIQFKGNSQMLLNKVNNFLTPLSQKLSQLGFTPGELSTQI
EEEECCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AQVPATLLPGDHFLVKTKA
HHCCHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA