| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is tuaG [H]
Identifier: 160876140
GI number: 160876140
Start: 3599880
End: 3600629
Strand: Reverse
Name: tuaG [H]
Synonym: Sbal195_3031
Alternate gene names: 160876140
Gene position: 3600629-3599880 (Counterclockwise)
Preceding gene: 160876141
Following gene: 160876139
Centisome position: 67.34
GC content: 34.53
Gene sequence:
>750_bases ATGGAATATCAACCACTAGTATCGATTATCATGCCAAGCTATAACTCAGTCAGAACTATAGCTGAAAGTATTGAGTCAGT TATAGCTCAAACATATAAAAACTGGGAATTATTAATCACTGATGATGTTTCTGTTGATGACACTAAAGATATAATTCGTT GCTATTGTGAGAAGGACAAAAGAATAAAGCTATTTGAACTTGATACTAACTCTGGCGCAGGTGCTTCACGTAATAATAGT ATTGGTAATTCATCGGGTGACTATATTGCTTTCCTAGATTCTGATGATATATGGTTGCCCAACAAGCTAATGCTCCAGAT AGAATTTATGGAGAAAAATAATATTTTACTATCATACAGTGCATACCAGAAGTTTAGTGCACTTGGCGATGGCGGAATCG TTATGCCTCCAAATTCTGTAAGTTACTCTGAGTTACTGACAGGAAATGTCATTGGTTGTTTGACGGCTATTTATAATGCC AAGGTTCTTGGTAAGCGTTATATGCCATTAATAAGAAAGAGGCAGGATATGGGTTTGTGGCTAAGCATTTTAAAAGATGT TGACAAAGCCATTTGTATACCAAATGTTTTGGCAAAATATCGTATCGATACAGGTATGACGCAGAATAAATTCAATATAT TAAAATGGCAGTGGGCGTTTTATCGTGAAGTTATTGGCTTAAGTTTTATAAAGTCTGCTAAATGTTTTATCTTATACGCC TTTAAAGGCTTTATTAAAAGTCGCATTTAA
Upstream 100 bases:
>100_bases TAAATATGATATTTACTATATTAAACATCATAGTACTTTATTAGATATAAAAATTCTGTTGAAAACGGTTAAAGTTGTTT TATTTGGTATGGGACGATAA
Downstream 100 bases:
>100_bases AAGAGAGTTAAAATGAAAGTTTTAGTAACAGGTGGTGCAGGTTTTATTGGTTCTGCTGTTGTGCGTCATATAATTTGTAA TACTCAAGACAGTGTGATTA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MEYQPLVSIIMPSYNSVRTIAESIESVIAQTYKNWELLITDDVSVDDTKDIIRCYCEKDKRIKLFELDTNSGAGASRNNS IGNSSGDYIAFLDSDDIWLPNKLMLQIEFMEKNNILLSYSAYQKFSALGDGGIVMPPNSVSYSELLTGNVIGCLTAIYNA KVLGKRYMPLIRKRQDMGLWLSILKDVDKAICIPNVLAKYRIDTGMTQNKFNILKWQWAFYREVIGLSFIKSAKCFILYA FKGFIKSRI
Sequences:
>Translated_249_residues MEYQPLVSIIMPSYNSVRTIAESIESVIAQTYKNWELLITDDVSVDDTKDIIRCYCEKDKRIKLFELDTNSGAGASRNNS IGNSSGDYIAFLDSDDIWLPNKLMLQIEFMEKNNILLSYSAYQKFSALGDGGIVMPPNSVSYSELLTGNVIGCLTAIYNA KVLGKRYMPLIRKRQDMGLWLSILKDVDKAICIPNVLAKYRIDTGMTQNKFNILKWQWAFYREVIGLSFIKSAKCFILYA FKGFIKSRI >Mature_249_residues MEYQPLVSIIMPSYNSVRTIAESIESVIAQTYKNWELLITDDVSVDDTKDIIRCYCEKDKRIKLFELDTNSGAGASRNNS IGNSSGDYIAFLDSDDIWLPNKLMLQIEFMEKNNILLSYSAYQKFSALGDGGIVMPPNSVSYSELLTGNVIGCLTAIYNA KVLGKRYMPLIRKRQDMGLWLSILKDVDKAICIPNVLAKYRIDTGMTQNKFNILKWQWAFYREVIGLSFIKSAKCFILYA FKGFIKSRI
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788372, Length=140, Percent_Identity=33.5714285714286, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1790044, Length=143, Percent_Identity=29.3706293706294, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 28347; Mature: 28347
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYQPLVSIIMPSYNSVRTIAESIESVIAQTYKNWELLITDDVSVDDTKDIIRCYCEKDK CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCC RIKLFELDTNSGAGASRNNSIGNSSGDYIAFLDSDDIWLPNKLMLQIEFMEKNNILLSYS CEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEH AYQKFSALGDGGIVMPPNSVSYSELLTGNVIGCLTAIYNAKVLGKRYMPLIRKRQDMGLW HHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LSILKDVDKAICIPNVLAKYRIDTGMTQNKFNILKWQWAFYREVIGLSFIKSAKCFILYA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEHH FKGFIKSRI HHHHHHCCC >Mature Secondary Structure MEYQPLVSIIMPSYNSVRTIAESIESVIAQTYKNWELLITDDVSVDDTKDIIRCYCEKDK CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCC RIKLFELDTNSGAGASRNNSIGNSSGDYIAFLDSDDIWLPNKLMLQIEFMEKNNILLSYS CEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEH AYQKFSALGDGGIVMPPNSVSYSELLTGNVIGCLTAIYNAKVLGKRYMPLIRKRQDMGLW HHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LSILKDVDKAICIPNVLAKYRIDTGMTQNKFNILKWQWAFYREVIGLSFIKSAKCFILYA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEHH FKGFIKSRI HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10048024; 9384377 [H]