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The map label for this gene is gfcB [H]

Identifier: 160876116

GI number: 160876116

Start: 3575051

End: 3575758

Strand: Direct

Name: gfcB [H]

Synonym: Sbal195_3007

Alternate gene names: 160876116

Gene position: 3575051-3575758 (Clockwise)

Preceding gene: 160876115

Following gene: 160876117

Centisome position: 66.86

GC content: 40.68

Gene sequence:

>708_bases
ATGCGTATAAATAAAAAATTACTCTTACTCACAGCCTCAGTTGCATTAATGGGTATTGCCGGCTGTAGTCAACGAATTAG
CGCCCTCAACGATACGATTAAATTAGCTTTAATTGGAGAGAGCGATATTAAGCTCACCACCGAGCAAATAGAAGCCAATC
CCTATGCTAGCATCTATGTCAAGATAGAAGATATACCTCAAGCATTTGTTGTTTTAGCCTTAGCAGAACCAAAACACACC
CTCACCACTGTCAGACCAGCGCCAGAAGCAATGGAACTAAAATGGCTCTCTGCAGATAAAGCAATGTTAGTGACTGTGAA
CGGGCGTTTGGTGAGAACTTATAGTCTGCTCACAGGCAATTTAGTCGCTATTGAAAGTTCAGAACCCGATCCTATTCTCC
TAGGTCTGCATCTAAATAGTACGCCTAAGACTTGGACTCGCACGCTTGACTGGCAGCCCGGCTACCGTTATGGGTATAAA
CTTAATTCACAGTTTGATTTTATAGCTGAGGAAAAGATACTCATAAATGATACTCCCACTCAAGCATTGCATTACAGCGA
GTTAGTATCTGTTGAAGGTCTTAATATTCAATATTTAAATGAGTTTTGGTTAAAACCGGATAATGGGCACGTCATTAAAA
GCCGCCAGAAGATAGCACCCAATCTGCCTTTTATCGATATAACTTTACTTAAGCCATTTGCATATTAG

Upstream 100 bases:

>100_bases
TTTGCTCGTTTAGAGAAAGTGAGAATCACTTCATTTATTGAAATAAGTCTCAGATATCTCTACATTAGATATTTATTACT
ATTGAGAATAAGCAACTCGG

Downstream 100 bases:

>100_bases
TGGAACCATTATGAGATATTACATCGCGCCATTGGCACTTGTACTTAGTTCAGCACTAACGGCAACTGTTCATGCTGAAA
CCCAGTTATTCATCAGTACA

Product: putative lipoprotein

Products: NA

Alternate protein names: Group 4 capsule protein B homolog [H]

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRINKKLLLLTASVALMGIAGCSQRISALNDTIKLALIGESDIKLTTEQIEANPYASIYVKIEDIPQAFVVLALAEPKHT
LTTVRPAPEAMELKWLSADKAMLVTVNGRLVRTYSLLTGNLVAIESSEPDPILLGLHLNSTPKTWTRTLDWQPGYRYGYK
LNSQFDFIAEEKILINDTPTQALHYSELVSVEGLNIQYLNEFWLKPDNGHVIKSRQKIAPNLPFIDITLLKPFAY

Sequences:

>Translated_235_residues
MRINKKLLLLTASVALMGIAGCSQRISALNDTIKLALIGESDIKLTTEQIEANPYASIYVKIEDIPQAFVVLALAEPKHT
LTTVRPAPEAMELKWLSADKAMLVTVNGRLVRTYSLLTGNLVAIESSEPDPILLGLHLNSTPKTWTRTLDWQPGYRYGYK
LNSQFDFIAEEKILINDTPTQALHYSELVSVEGLNIQYLNEFWLKPDNGHVIKSRQKIAPNLPFIDITLLKPFAY
>Mature_235_residues
MRINKKLLLLTASVALMGIAGCSQRISALNDTIKLALIGESDIKLTTEQIEANPYASIYVKIEDIPQAFVVLALAEPKHT
LTTVRPAPEAMELKWLSADKAMLVTVNGRLVRTYSLLTGNLVAIESSEPDPILLGLHLNSTPKTWTRTLDWQPGYRYGYK
LNSQFDFIAEEKILINDTPTQALHYSELVSVEGLNIQYLNEFWLKPDNGHVIKSRQKIAPNLPFIDITLLKPFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjbF [H]

Homologues:

Organism=Escherichia coli, GI1787221, Length=224, Percent_Identity=30.3571428571429, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87082360, Length=217, Percent_Identity=29.0322580645161, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021308 [H]

Pfam domain/function: PF11102 DUF2886 [H]

EC number: NA

Molecular weight: Translated: 26335; Mature: 26335

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRINKKLLLLTASVALMGIAGCSQRISALNDTIKLALIGESDIKLTTEQIEANPYASIYV
CCCCCEEEEEEHHHHHHHHHCHHHHHHHCCCEEEEEEECCCCCEEEEEHCCCCCEEEEEE
KIEDIPQAFVVLALAEPKHTLTTVRPAPEAMELKWLSADKAMLVTVNGRLVRTYSLLTGN
EEECCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCEEEEEEEEEECC
LVAIESSEPDPILLGLHLNSTPKTWTRTLDWQPGYRYGYKLNSQFDFIAEEKILINDTPT
EEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCEECEEECCCCCEEECCEEEEECCCC
QALHYSELVSVEGLNIQYLNEFWLKPDNGHVIKSRQKIAPNLPFIDITLLKPFAY
HHEEHHHHEEECCCCEEEEHEEEECCCCCCEEECCHHCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MRINKKLLLLTASVALMGIAGCSQRISALNDTIKLALIGESDIKLTTEQIEANPYASIYV
CCCCCEEEEEEHHHHHHHHHCHHHHHHHCCCEEEEEEECCCCCEEEEEHCCCCCEEEEEE
KIEDIPQAFVVLALAEPKHTLTTVRPAPEAMELKWLSADKAMLVTVNGRLVRTYSLLTGN
EEECCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCEEEEEEEEEECC
LVAIESSEPDPILLGLHLNSTPKTWTRTLDWQPGYRYGYKLNSQFDFIAEEKILINDTPT
EEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCEECEEECCCCCEEECCEEEEECCCC
QALHYSELVSVEGLNIQYLNEFWLKPDNGHVIKSRQKIAPNLPFIDITLLKPFAY
HHEEHHHHEEECCCCEEEEHEEEECCCCCCEEECCHHCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]