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The map label for this gene is tdk [H]

Identifier: 160876099

GI number: 160876099

Start: 3552441

End: 3553019

Strand: Reverse

Name: tdk [H]

Synonym: Sbal195_2990

Alternate gene names: 160876099

Gene position: 3553019-3552441 (Counterclockwise)

Preceding gene: 160876102

Following gene: 160876098

Centisome position: 66.45

GC content: 45.77

Gene sequence:

>579_bases
TTGGCACAATTGTATTTTTATTATTCGTCGATGAACGCGGGTAAATCCACTTCCCTATTACAGTCATCCTATAATTACCG
CGAACGCGGTATGAATACCTTGGTGATGACAGCCTCCATAGATGACAGATATGGCAAAGGTAAAGTGGCTTCGCGTATCG
GTATTGAAACCGAAGCACAGGTTTTTAGTAGCCAAGATGATCTGACTCAGATGATTAGCGATGTGCATCAAGCCACGCCA
TTAAGTTGTGTGTTGGTGGATGAGTGCCAGTTTTTGAGTAAAGAACAGGTAAAGCAGCTGACGCATGTGGTCGATAATAT
TGATATTCCCGTACTCTGCTATGGCCTAAGAACCGATTTCCAAGGTGAACTCTTTAGCGGCAGTCATTATTTATTAGCGT
GGGCCGATAAGTTGGTTGAGCTGAAAACCATTTGCCATTGTGGCCGCAAAGCCAACATGGTGGTGCGCCTCGACGGTGAC
GGCAAAGTGATGCGCGAGGGTGAACAAGTGGCGATTGGCGGTAATGAAAGCTACGAGTCCGTTTGCCGTAAACATTTTCG
TGAGTTTATCTGGGATTAG

Upstream 100 bases:

>100_bases
GCTGCTAGTGTTCTGATGTGAAGCGCAATGTTAGACTAGCGCCCAATTTGGCTCTGGTGGCAGACGCGTAAGCGCTAACG
TTTTTTAAAGGGTATAAGTC

Downstream 100 bases:

>100_bases
TCTTTGCTAACTGGGTATTGTTGGCGGCTAAATATTTTTTGTGTGGCTTATTGGCTCGTTCTGTTTCTCAGTCACAGTGT
TTATGAGTCACATTGCTGCT

Product: thymidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MAQLYFYYSSMNAGKSTSLLQSSYNYRERGMNTLVMTASIDDRYGKGKVASRIGIETEAQVFSSQDDLTQMISDVHQATP
LSCVLVDECQFLSKEQVKQLTHVVDNIDIPVLCYGLRTDFQGELFSGSHYLLAWADKLVELKTICHCGRKANMVVRLDGD
GKVMREGEQVAIGGNESYESVCRKHFREFIWD

Sequences:

>Translated_192_residues
MAQLYFYYSSMNAGKSTSLLQSSYNYRERGMNTLVMTASIDDRYGKGKVASRIGIETEAQVFSSQDDLTQMISDVHQATP
LSCVLVDECQFLSKEQVKQLTHVVDNIDIPVLCYGLRTDFQGELFSGSHYLLAWADKLVELKTICHCGRKANMVVRLDGD
GKVMREGEQVAIGGNESYESVCRKHFREFIWD
>Mature_191_residues
AQLYFYYSSMNAGKSTSLLQSSYNYRERGMNTLVMTASIDDRYGKGKVASRIGIETEAQVFSSQDDLTQMISDVHQATPL
SCVLVDECQFLSKEQVKQLTHVVDNIDIPVLCYGLRTDFQGELFSGSHYLLAWADKLVELKTICHCGRKANMVVRLDGDG
KVMREGEQVAIGGNESYESVCRKHFREFIWD

Specific function: Phosphorylates Both Thymidine And Deoxyuridine. [C]

COG id: COG1435

COG function: function code F; Thymidine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidine kinase family [H]

Homologues:

Organism=Escherichia coli, GI1787490, Length=188, Percent_Identity=68.0851063829787, Blast_Score=275, Evalue=2e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001267
- InterPro:   IPR020633
- InterPro:   IPR020634 [H]

Pfam domain/function: PF00265 TK [H]

EC number: =2.7.1.21 [H]

Molecular weight: Translated: 21718; Mature: 21587

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00603 TK_CELLULAR_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLYFYYSSMNAGKSTSLLQSSYNYRERGMNTLVMTASIDDRYGKGKVASRIGIETEAQ
CCEEEEEEECCCCCCHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCHHHHCCCCHHHH
VFSSQDDLTQMISDVHQATPLSCVLVDECQFLSKEQVKQLTHVVDNIDIPVLCYGLRTDF
HHCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCC
QGELFSGSHYLLAWADKLVELKTICHCGRKANMVVRLDGDGKVMREGEQVAIGGNESYES
CCEEECCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCEEEECCCCCHHH
VCRKHFREFIWD
HHHHHHHHHHCC
>Mature Secondary Structure 
AQLYFYYSSMNAGKSTSLLQSSYNYRERGMNTLVMTASIDDRYGKGKVASRIGIETEAQ
CEEEEEEECCCCCCHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCHHHHCCCCHHHH
VFSSQDDLTQMISDVHQATPLSCVLVDECQFLSKEQVKQLTHVVDNIDIPVLCYGLRTDF
HHCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCC
QGELFSGSHYLLAWADKLVELKTICHCGRKANMVVRLDGDGKVMREGEQVAIGGNESYES
CCEEECCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCEEEECCCCCHHH
VCRKHFREFIWD
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]