| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875630
Identifier: 160875630
GI number: 160875630
Start: 2974205
End: 2976046
Strand: Direct
Name: 160875630
Synonym: Sbal195_2518
Alternate gene names: NA
Gene position: 2974205-2976046 (Clockwise)
Preceding gene: 160875624
Following gene: 160875631
Centisome position: 55.62
GC content: 36.26
Gene sequence:
>1842_bases ATGATAAAATTAAAAAAAATAGCAATTAGTGGCTTCAAAGGTATCAGTGGACGGGTCGAAATACCGGCAAAAGATTTTAA TGTCATTGTTGGTAAGAATGATGCAGGCAAGTCAACGGTATTGAGAGCTTTAGATCTCTTTATTAACGGAAGGCAATATC AAGCTGAATACTTAAATAATACGACAGATCAATTCTCTGTTATTGAACTCTACTTTTCTCCAAATAATACACCTATTGTT ATTGATGAAAACACTACGACTACTTTTGAAGCTGAAGGCTTGGTTGATAGTGATGGTTATTTACACCTAACTAAAAAGTG GGATGGAACTAAAACAGGTAAAATTTCCCCTGAATATTTTGTAGAAAGACTCTCATTTGGTGACTTAGATTTCTTTTCGC TTACTGAAGCGAAACTTATAAAGCTTTGTCAGGATAATGGGCTAGAAGCCGAACCGGGCTTAATGACAAACCCAGATACA GGTGAAGAACATAATAATGCGGAGAAAAGGAATAGACTTCGAGAATTCTTTGTTGAACGCGGAGATGAGTCTTCATATAT AGCAGAGAAACTACCAACTTCAGGTGCATCTCGTCTAAAAAAGACAGAGAGTGCCGTCAAATTATGCTTGCCTAGGTTTG AATACTTTTTAGCTGATACTCCTTTGTCAGAAAGTGATTCTACGATACAGAAATACTTTAAAGATATGGCGTTTCAAGTA ATTCAGGATCAGGTAAACACTGAAGAACTTGAGGAAACTGTAAGAGGACATTTACAAACAGTTCTGTCAGCCATAACAAG TAAAATCAATGCTGTAGTCCCTGAAAGTGAACAGGTTCAAGCAAAAGTTGAATTTGATTGGAGCAAATTAATTACGACAA CTTTTGACAGTGACAATGGAAACGGATCCGTGCCACTGTCTGCAAGAGGTGATGGTTTCCGAAGAATTACTATGATGGCT TATTTTGAGTATCTTGCTGAGCAGAAATCTGGTGAGATTCAGAACATTATATTCGCTTTTGAAGAGCCTGAAACATTTCT TCATCCGTCTGCTCAGGAAAACCTGTTTGAAAAGCTAAATGATATTTCAGTCGCGGGGTATCAAGTTTTTCTGACGACTC ACTCGCCAGTAATCGTTTCTAAAACTCAAAAATCTGATTTGCACAGGGTTTATAAAGAAGCTGGCTTATATACATGTGAT TCAAAAGTGAACGATCATTCCGATATTGCAAATGATCTTGGAATAACAATCGACAACCAATTTATTTCATTGTTCGACAA CACGAAGTGTTTTCTCCTTGTTGAAGGTATAGACGATTGTGTTGCCTTTAACCATCTAGCCAATACGTATAAAGATAATG ATTTAATTGAGCAAAATTTTGTAGATCTAGGGGTTATTACTATTCCTGTAGGCGGTTGCGGTAGTATCAAACATTGGGTA ACGCTAGATTTGTTGAAAACTTTAAATAAACCATTTTTTATTTTCTTAGACTCGGACAAAACTTCAGAAGATGAAGTATC CCCAAATGCTGAAAAATTGGTAGGGTATGGGTTCATTGAAGGTGATAACTTTATGGTTTCGAAGAAAAGAGAAATCGAAA ACTATATGTCTTTAGAAGGGATTGAACGTTTAGTTCCGGGGGCAAATTTAATTTTCACCGATTGGTGTGATGTTAAGGCA TTATCAAAATCTAATGGTTTAGCAGGAGCCCTAGGTGGCAAAAAAATAGCAAATAAGTTATTTGAATCGCTAACATTTGA AGAACTAAGGTCTACTTTTTCTACTGGTGAGATTGATGAATTTTTGGAGATACACTCGATAGTATCTGTACTAGCTGATT GA
Upstream 100 bases:
>100_bases AATCAATAGCTTTGCCAAGGCGCGGCTCAGATAATAGGTTTATTAAATATGCATGCGGACTATACAAATGCTAAGCCTCA TCAGTTGGAGTTAGTAAGTA
Downstream 100 bases:
>100_bases GGCTTAACGAGCATTTTAGAGTGATTCCCAACGTTTGGCATTTTTCATTCCATCGTTGGGTTTCGTGTTTAAGGCGCAAT GGATTAGGTTTAGTGGTAGC
Product: ATP-dependent OLD family endonuclease
Products: NA
Alternate protein names: ATP-Dependent Endonuclease Of OLD Family-Like Protein; SMC Domain Protein; ATP-Dependent Endonuclease Of Old Family; Nucleoside Triphosphate Hydrolase; ATP-Dependent Endonuclease Of OLD Family; ATP-Dependent Endonuclease; ATP-Dependent Endonuclease Of OLD Family- Like Protein
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MIKLKKIAISGFKGISGRVEIPAKDFNVIVGKNDAGKSTVLRALDLFINGRQYQAEYLNNTTDQFSVIELYFSPNNTPIV IDENTTTTFEAEGLVDSDGYLHLTKKWDGTKTGKISPEYFVERLSFGDLDFFSLTEAKLIKLCQDNGLEAEPGLMTNPDT GEEHNNAEKRNRLREFFVERGDESSYIAEKLPTSGASRLKKTESAVKLCLPRFEYFLADTPLSESDSTIQKYFKDMAFQV IQDQVNTEELEETVRGHLQTVLSAITSKINAVVPESEQVQAKVEFDWSKLITTTFDSDNGNGSVPLSARGDGFRRITMMA YFEYLAEQKSGEIQNIIFAFEEPETFLHPSAQENLFEKLNDISVAGYQVFLTTHSPVIVSKTQKSDLHRVYKEAGLYTCD SKVNDHSDIANDLGITIDNQFISLFDNTKCFLLVEGIDDCVAFNHLANTYKDNDLIEQNFVDLGVITIPVGGCGSIKHWV TLDLLKTLNKPFFIFLDSDKTSEDEVSPNAEKLVGYGFIEGDNFMVSKKREIENYMSLEGIERLVPGANLIFTDWCDVKA LSKSNGLAGALGGKKIANKLFESLTFEELRSTFSTGEIDEFLEIHSIVSVLAD
Sequences:
>Translated_613_residues MIKLKKIAISGFKGISGRVEIPAKDFNVIVGKNDAGKSTVLRALDLFINGRQYQAEYLNNTTDQFSVIELYFSPNNTPIV IDENTTTTFEAEGLVDSDGYLHLTKKWDGTKTGKISPEYFVERLSFGDLDFFSLTEAKLIKLCQDNGLEAEPGLMTNPDT GEEHNNAEKRNRLREFFVERGDESSYIAEKLPTSGASRLKKTESAVKLCLPRFEYFLADTPLSESDSTIQKYFKDMAFQV IQDQVNTEELEETVRGHLQTVLSAITSKINAVVPESEQVQAKVEFDWSKLITTTFDSDNGNGSVPLSARGDGFRRITMMA YFEYLAEQKSGEIQNIIFAFEEPETFLHPSAQENLFEKLNDISVAGYQVFLTTHSPVIVSKTQKSDLHRVYKEAGLYTCD SKVNDHSDIANDLGITIDNQFISLFDNTKCFLLVEGIDDCVAFNHLANTYKDNDLIEQNFVDLGVITIPVGGCGSIKHWV TLDLLKTLNKPFFIFLDSDKTSEDEVSPNAEKLVGYGFIEGDNFMVSKKREIENYMSLEGIERLVPGANLIFTDWCDVKA LSKSNGLAGALGGKKIANKLFESLTFEELRSTFSTGEIDEFLEIHSIVSVLAD >Mature_613_residues MIKLKKIAISGFKGISGRVEIPAKDFNVIVGKNDAGKSTVLRALDLFINGRQYQAEYLNNTTDQFSVIELYFSPNNTPIV IDENTTTTFEAEGLVDSDGYLHLTKKWDGTKTGKISPEYFVERLSFGDLDFFSLTEAKLIKLCQDNGLEAEPGLMTNPDT GEEHNNAEKRNRLREFFVERGDESSYIAEKLPTSGASRLKKTESAVKLCLPRFEYFLADTPLSESDSTIQKYFKDMAFQV IQDQVNTEELEETVRGHLQTVLSAITSKINAVVPESEQVQAKVEFDWSKLITTTFDSDNGNGSVPLSARGDGFRRITMMA YFEYLAEQKSGEIQNIIFAFEEPETFLHPSAQENLFEKLNDISVAGYQVFLTTHSPVIVSKTQKSDLHRVYKEAGLYTCD SKVNDHSDIANDLGITIDNQFISLFDNTKCFLLVEGIDDCVAFNHLANTYKDNDLIEQNFVDLGVITIPVGGCGSIKHWV TLDLLKTLNKPFFIFLDSDKTSEDEVSPNAEKLVGYGFIEGDNFMVSKKREIENYMSLEGIERLVPGANLIFTDWCDVKA LSKSNGLAGALGGKKIANKLFESLTFEELRSTFSTGEIDEFLEIHSIVSVLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68583; Mature: 68583
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLKKIAISGFKGISGRVEIPAKDFNVIVGKNDAGKSTVLRALDLFINGRQYQAEYLNN CCEEEEEEEECCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHCC TTDQFSVIELYFSPNNTPIVIDENTTTTFEAEGLVDSDGYLHLTKKWDGTKTGKISPEYF CCCCEEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHH VERLSFGDLDFFSLTEAKLIKLCQDNGLEAEPGLMTNPDTGEEHNNAEKRNRLREFFVER HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GDESSYIAEKLPTSGASRLKKTESAVKLCLPRFEYFLADTPLSESDSTIQKYFKDMAFQV CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IQDQVNTEELEETVRGHLQTVLSAITSKINAVVPESEQVQAKVEFDWSKLITTTFDSDNG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECHHHEEEEEECCCCC NGSVPLSARGDGFRRITMMAYFEYLAEQKSGEIQNIIFAFEEPETFLHPSAQENLFEKLN CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHH DISVAGYQVFLTTHSPVIVSKTQKSDLHRVYKEAGLYTCDSKVNDHSDIANDLGITIDNQ CCEEEEEEEEEEECCCEEEECCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCEEECCH FISLFDNTKCFLLVEGIDDCVAFNHLANTYKDNDLIEQNFVDLGVITIPVGGCGSIKHWV HHEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEECCCCCCHHHHH TLDLLKTLNKPFFIFLDSDKTSEDEVSPNAEKLVGYGFIEGDNFMVSKKREIENYMSLEG HHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEECCCEEEECHHHHHHHHHHHH IERLVPGANLIFTDWCDVKALSKSNGLAGALGGKKIANKLFESLTFEELRSTFSTGEIDE HHHHCCCCCEEEECCCCCEECCCCCCCEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHH FLEIHSIVSVLAD HHHHHHHHHHHCC >Mature Secondary Structure MIKLKKIAISGFKGISGRVEIPAKDFNVIVGKNDAGKSTVLRALDLFINGRQYQAEYLNN CCEEEEEEEECCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHCC TTDQFSVIELYFSPNNTPIVIDENTTTTFEAEGLVDSDGYLHLTKKWDGTKTGKISPEYF CCCCEEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHH VERLSFGDLDFFSLTEAKLIKLCQDNGLEAEPGLMTNPDTGEEHNNAEKRNRLREFFVER HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GDESSYIAEKLPTSGASRLKKTESAVKLCLPRFEYFLADTPLSESDSTIQKYFKDMAFQV CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IQDQVNTEELEETVRGHLQTVLSAITSKINAVVPESEQVQAKVEFDWSKLITTTFDSDNG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECHHHEEEEEECCCCC NGSVPLSARGDGFRRITMMAYFEYLAEQKSGEIQNIIFAFEEPETFLHPSAQENLFEKLN CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHH DISVAGYQVFLTTHSPVIVSKTQKSDLHRVYKEAGLYTCDSKVNDHSDIANDLGITIDNQ CCEEEEEEEEEEECCCEEEECCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCEEECCH FISLFDNTKCFLLVEGIDDCVAFNHLANTYKDNDLIEQNFVDLGVITIPVGGCGSIKHWV HHEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEECCCCCCHHHHH TLDLLKTLNKPFFIFLDSDKTSEDEVSPNAEKLVGYGFIEGDNFMVSKKREIENYMSLEG HHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEECCCEEEECHHHHHHHHHHHH IERLVPGANLIFTDWCDVKALSKSNGLAGALGGKKIANKLFESLTFEELRSTFSTGEIDE HHHHCCCCCEEEECCCCCEECCCCCCCEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHH FLEIHSIVSVLAD HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA