Click here to switch to the map view.

The map label for this gene is arnB [H]

Identifier: 160875588

GI number: 160875588

Start: 2928283

End: 2929473

Strand: Direct

Name: arnB [H]

Synonym: Sbal195_2476

Alternate gene names: 160875588

Gene position: 2928283-2929473 (Clockwise)

Preceding gene: 160875587

Following gene: 160875589

Centisome position: 54.76

GC content: 46.77

Gene sequence:

>1191_bases
ATGCCCGGTTTTGAATTATTTGGTCCTGAAGAGAAGCAGGAAGTCGCTGACGTTATGGAAAACGGTTTTACCTTCCGTTA
CAACTTCGACCATATGCGTAATGATCGCTGGAAGACTCGCGATATGGAGCAACTGCTCTGCGAGAAAATGAACGTGAAGC
ATGCTCACCTTTTATCAAGCGGTACCGCTGCACTGCAAACGGCCATGATGGCTGCGGGCATTGGCGCTGGTGACGAAGTT
ATCGTGCCACCTTTTACCTTTGTTGCCTCAGTTGAAGCGATTTTTATGGCAGGCGCGATTCCTATCTTTGCCGAAATCGA
TGAGACACTGTGTTTATCTCCAGAAGGTATTGAAGCCGCGATTACCCCACGTACTAAAGCGATTAACTTAGTGCATATGT
GTGGTTCTATGGCGAAGATGGACGAGATCAAAGCCGTCTGTGCAAAACATAACATCAAGATTTTAGAAGATGCTTGCCAA
GCCATTGGTGGCAGCTACAAGGGCCAAGCCTTAGGTACTATCGGTGATGTGGGTTGTTACTCATTCGATTCAGTCAAAAC
CATCACCTGTGGTGAAGGTGGCGCTGTGATCACTAATAACACTGAAATCTACAACAACGCGCACATGTTCTCCGATCACG
GCCATGACCACATAGGTAAAGACCGCGGCGCTGAGTCACACCCTATCATTGGCTTGAACTTCCGTATTTCGGAAATGAAC
GCCGCCTTAGGTTTAGCGCAATTACGTAAACTCGATACCATTATCGATATCCAACGTAAAAACAAAAAGACCATTAAAGA
TGCGATGGCCGCTGCTATCCCAGAAGTGACCTTCCGCCTGATCCCCGATCCAGAAGGCGACTCAGCGGGCTTCTTAACCT
TTATGTTGCCAACCGAAGCGCGTACTATTGAAATCAGCAAAAAACTGGCTGAAAACGGCGTCGATGGCTGCTTCTACTGG
TATGTAAACAACTGGCATTATTTGAAAAACTGGAAACACATTCAGGAGCTTAAGGCATCTGCTGCGTTGCCAATCACATT
AATCGCCGACAGACCTGACTATACTCAAGTTTCTGTGCCTAAATCCGATGCCATTATGAGCCGCACCATTTCTATGCTCA
TCAAGTTGTCTTGGACCGATGCTCAGATCGCTGAGCGTATCGAAAACATCAAGAAAGCATTTGCCCAATAA

Upstream 100 bases:

>100_bases
TTCAGCAATAAAACATCGCAAGGGTCTATTACCCCAGTTATAATCCGCCAGTTAATTGCAGCGCGACCTATGCGCGACAT
ATTCTAAGGAGATACCTTCC

Downstream 100 bases:

>100_bases
TTCTACGGGAGTTTGTTGCAATGAGTTTTAAGAATTTTAAAGTAGTTGAAAAAATGATCTTCGGCCGTGGCTCATTCGTC
CAATTGGATGAAGTGTTAGC

Product: glutamine--scyllo-inositol transaminase

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MPGFELFGPEEKQEVADVMENGFTFRYNFDHMRNDRWKTRDMEQLLCEKMNVKHAHLLSSGTAALQTAMMAAGIGAGDEV
IVPPFTFVASVEAIFMAGAIPIFAEIDETLCLSPEGIEAAITPRTKAINLVHMCGSMAKMDEIKAVCAKHNIKILEDACQ
AIGGSYKGQALGTIGDVGCYSFDSVKTITCGEGGAVITNNTEIYNNAHMFSDHGHDHIGKDRGAESHPIIGLNFRISEMN
AALGLAQLRKLDTIIDIQRKNKKTIKDAMAAAIPEVTFRLIPDPEGDSAGFLTFMLPTEARTIEISKKLAENGVDGCFYW
YVNNWHYLKNWKHIQELKASAALPITLIADRPDYTQVSVPKSDAIMSRTISMLIKLSWTDAQIAERIENIKKAFAQ

Sequences:

>Translated_396_residues
MPGFELFGPEEKQEVADVMENGFTFRYNFDHMRNDRWKTRDMEQLLCEKMNVKHAHLLSSGTAALQTAMMAAGIGAGDEV
IVPPFTFVASVEAIFMAGAIPIFAEIDETLCLSPEGIEAAITPRTKAINLVHMCGSMAKMDEIKAVCAKHNIKILEDACQ
AIGGSYKGQALGTIGDVGCYSFDSVKTITCGEGGAVITNNTEIYNNAHMFSDHGHDHIGKDRGAESHPIIGLNFRISEMN
AALGLAQLRKLDTIIDIQRKNKKTIKDAMAAAIPEVTFRLIPDPEGDSAGFLTFMLPTEARTIEISKKLAENGVDGCFYW
YVNNWHYLKNWKHIQELKASAALPITLIADRPDYTQVSVPKSDAIMSRTISMLIKLSWTDAQIAERIENIKKAFAQ
>Mature_395_residues
PGFELFGPEEKQEVADVMENGFTFRYNFDHMRNDRWKTRDMEQLLCEKMNVKHAHLLSSGTAALQTAMMAAGIGAGDEVI
VPPFTFVASVEAIFMAGAIPIFAEIDETLCLSPEGIEAAITPRTKAINLVHMCGSMAKMDEIKAVCAKHNIKILEDACQA
IGGSYKGQALGTIGDVGCYSFDSVKTITCGEGGAVITNNTEIYNNAHMFSDHGHDHIGKDRGAESHPIIGLNFRISEMNA
ALGLAQLRKLDTIIDIQRKNKKTIKDAMAAAIPEVTFRLIPDPEGDSAGFLTFMLPTEARTIEISKKLAENGVDGCFYWY
VNNWHYLKNWKHIQELKASAALPITLIADRPDYTQVSVPKSDAIMSRTISMLIKLSWTDAQIAERIENIKKAFAQ

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=261, Percent_Identity=35.632183908046, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI2367285, Length=252, Percent_Identity=35.3174603174603, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 43663; Mature: 43531

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGFELFGPEEKQEVADVMENGFTFRYNFDHMRNDRWKTRDMEQLLCEKMNVKHAHLLSS
CCCCCCCCCCHHHHHHHHHHCCCEEEEECHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHC
GTAALQTAMMAAGIGAGDEVIVPPFTFVASVEAIFMAGAIPIFAEIDETLCLSPEGIEAA
CHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCHHEEECCHHEECCCCCCEEE
ITPRTKAINLVHMCGSMAKMDEIKAVCAKHNIKILEDACQAIGGSYKGQALGTIGDVGCY
ECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SFDSVKTITCGEGGAVITNNTEIYNNAHMFSDHGHDHIGKDRGAESHPIIGLNFRISEMN
CCCCEEEEEECCCCEEEECCCEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEHHH
AALGLAQLRKLDTIIDIQRKNKKTIKDAMAAAIPEVTFRLIPDPEGDSAGFLTFMLPTEA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCC
RTIEISKKLAENGVDGCFYWYVNNWHYLKNWKHIQELKASAALPITLIADRPDYTQVSVP
EEEHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEECC
KSDAIMSRTISMLIKLSWTDAQIAERIENIKKAFAQ
CHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PGFELFGPEEKQEVADVMENGFTFRYNFDHMRNDRWKTRDMEQLLCEKMNVKHAHLLSS
CCCCCCCCCHHHHHHHHHHCCCEEEEECHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHC
GTAALQTAMMAAGIGAGDEVIVPPFTFVASVEAIFMAGAIPIFAEIDETLCLSPEGIEAA
CHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCHHEEECCHHEECCCCCCEEE
ITPRTKAINLVHMCGSMAKMDEIKAVCAKHNIKILEDACQAIGGSYKGQALGTIGDVGCY
ECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SFDSVKTITCGEGGAVITNNTEIYNNAHMFSDHGHDHIGKDRGAESHPIIGLNFRISEMN
CCCCEEEEEECCCCEEEECCCEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEHHH
AALGLAQLRKLDTIIDIQRKNKKTIKDAMAAAIPEVTFRLIPDPEGDSAGFLTFMLPTEA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCC
RTIEISKKLAENGVDGCFYWYVNNWHYLKNWKHIQELKASAALPITLIADRPDYTQVSVP
EEEHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEECC
KSDAIMSRTISMLIKLSWTDAQIAERIENIKKAFAQ
CHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA