| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875586
Identifier: 160875586
GI number: 160875586
Start: 2926735
End: 2927172
Strand: Direct
Name: 160875586
Synonym: Sbal195_2474
Alternate gene names: NA
Gene position: 2926735-2927172 (Clockwise)
Preceding gene: 160875585
Following gene: 160875587
Centisome position: 54.73
GC content: 47.72
Gene sequence:
>438_bases ATGAAACTATTAATAAGATCTCGGTTGATGATGAAAACCTTAGTCGCCAGTGCGCTTTTGCTTGGCAGTGCCTGTGTGCA AGCCGAAATTGCCGTCGTGGTGCATCCTTCTAATACGTCAGAAATTAGCGCTGCGGATATTTCACGTATCTATTTAGGTA AACTTAAGTCTTTCCCCAGTGGTGGCACTGTGGTCGCGCTCGATCAACCCGAGGGCTCACCCGCCCGTGATGCCTTCGTG AAGCAGATCCTCAATAAAACCGAGAGTCAGCTCAAAGCCTATTGGTCAAAACTTGTCTTTTCAGGCCAAGGCCAACCGCC AAAAGTCGTCGACTCTAGCGCAGAAATGCTCTCATTGATTGCCGCCAATCCGAATATGATCGGGTTTGTTGACGTCAGCG AAGTGAACGATAGCGTAAAAGTGATCAGTAAGTTCTAA
Upstream 100 bases:
>100_bases GCGCTAAAACTGGAGTACACCAACTACAGTAATGACAAACCGTCCTCCGATGAACAGTTGCTGAGTATGGCAATAGACTT AGTTTTTTAAGGAGTTAAAC
Downstream 100 bases:
>100_bases CCCATACAGCATCATCCTTGTCCGCCTAAATCTCTGGCGGACAAGATTTTCACTCAGTATTAGCGCGATATTAACCCCAA ACACACCCGCAAATGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKLLIRSRLMMKTLVASALLLGSACVQAEIAVVVHPSNTSEISAADISRIYLGKLKSFPSGGTVVALDQPEGSPARDAFV KQILNKTESQLKAYWSKLVFSGQGQPPKVVDSSAEMLSLIAANPNMIGFVDVSEVNDSVKVISKF
Sequences:
>Translated_145_residues MKLLIRSRLMMKTLVASALLLGSACVQAEIAVVVHPSNTSEISAADISRIYLGKLKSFPSGGTVVALDQPEGSPARDAFV KQILNKTESQLKAYWSKLVFSGQGQPPKVVDSSAEMLSLIAANPNMIGFVDVSEVNDSVKVISKF >Mature_145_residues MKLLIRSRLMMKTLVASALLLGSACVQAEIAVVVHPSNTSEISAADISRIYLGKLKSFPSGGTVVALDQPEGSPARDAFV KQILNKTESQLKAYWSKLVFSGQGQPPKVVDSSAEMLSLIAANPNMIGFVDVSEVNDSVKVISKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15494; Mature: 15494
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLIRSRLMMKTLVASALLLGSACVQAEIAVVVHPSNTSEISAADISRIYLGKLKSFPS CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC GGTVVALDQPEGSPARDAFVKQILNKTESQLKAYWSKLVFSGQGQPPKVVDSSAEMLSLI CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHH AANPNMIGFVDVSEVNDSVKVISKF HCCCCEEEEEEHHHCCCHHHHHCCC >Mature Secondary Structure MKLLIRSRLMMKTLVASALLLGSACVQAEIAVVVHPSNTSEISAADISRIYLGKLKSFPS CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC GGTVVALDQPEGSPARDAFVKQILNKTESQLKAYWSKLVFSGQGQPPKVVDSSAEMLSLI CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHH AANPNMIGFVDVSEVNDSVKVISKF HCCCCEEEEEEHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA