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The map label for this gene is xerD [H]

Identifier: 160875492

GI number: 160875492

Start: 2807693

End: 2808808

Strand: Direct

Name: xerD [H]

Synonym: Sbal195_2380

Alternate gene names: 160875492

Gene position: 2807693-2808808 (Clockwise)

Preceding gene: 160875487

Following gene: 160875493

Centisome position: 52.51

GC content: 42.2

Gene sequence:

>1116_bases
ATGTCTAAAATGATCCGGACAAATAGTAATGCTCAAAATAATACCAATATATCGAATGAAAGAGCGACTGGATCAGGTCA
TCACCATAATAACCGTGCTGAACAGCCACGTTTTTTTGAAGAGACTTTCCTACCACAATCTGTTCGAAATGATTATTTAA
GCGCCGCCGAAGAAACTGAATACGAAATTTCAGTTAACACTCGCCGTGTTTATAATACGAGCTTTAGTGTATTTAGCCGT
TATTGTGCCGAGCACCAACTTCAGGCCCTGCCCGCAGATCCACGAAGCGTAATTTCATTTATTGGTCATCAAAAAGAATT
GATCCAAGAAAGCACTGGCGTTCAACTTTCAAAGCAAACATTAACCACAAGGTTGGCAGCAATTCGCTACCATCATATTC
AAGCGGGATTCCACTCGCCTACCGAACATCCTCTGGTGATCAGAGTGATGCGTGGCTTGAGCAGAAATCAATCTCGCCAT
GTGAGTGACTATGATCAGCAACCCATTATGTATGATGAAGTGGAAATGTTGATCCAGGCTATCGATGAACAAGTGCAGCC
ATTAACCCGAGCGCGGGACAAAGCGATTATTCAATTAGGATTACAAGGTGGTTTTCGTCGTTCTGAACTGGCAGATATAA
AAGTTCAGTATGTCAATTTTCTGCGTAACAAATTAAAAGTGCGCCTGCCCTATTCGAAGAGTAATCAGCAAGGCCAACGG
GAATGGAAAGACCTGCCAGACCATGAACCCTTTGCAGCACTCGACGCCGTGAAAAATTGGTTATCGTTAGCCAATATTGA
AGACGGACATTTATTTAGATCACTTTCCCGTGATGGAAAAAATTTACGTCCGTATCAAATGAAAGACCGACATTCCGGAT
CCAGTTCATTACTGAATAAAAATAGTGGTTTCCTTACCGGCGATGATATTTATCGCATCATTAAAAAATATTGTACTAAA
GCAGGACTGCCCGCCAAATTTTATGGTGCCCACAGTTTGCGCAGTGGCTGCGTAACACAACTGCATGAAAATAATAAAGA
TCACTTGTACATCATGGCCAGAACCGGACATACCGATCCGCGCTCACTTCGTCACTATTTAAAACCAAAAGACTGA

Upstream 100 bases:

>100_bases
AGCACCCTACCAGTGATAATGACGATTATCGCTGGTAGGTATAGCTATAATTTGCGTATAATTACGCCTTCTTAAATCGA
TATCAGGTGACTTCTACGGC

Downstream 100 bases:

>100_bases
AACTTAACGACCACAGGTCAAGCATTAACTTCTCGTTTTAGCCTGAATTTTAAACTGAGAAATAGACTTCACTTGATTCT
TCTAAGCAGGAAAAGGATTT

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSKMIRTNSNAQNNTNISNERATGSGHHHNNRAEQPRFFEETFLPQSVRNDYLSAAEETEYEISVNTRRVYNTSFSVFSR
YCAEHQLQALPADPRSVISFIGHQKELIQESTGVQLSKQTLTTRLAAIRYHHIQAGFHSPTEHPLVIRVMRGLSRNQSRH
VSDYDQQPIMYDEVEMLIQAIDEQVQPLTRARDKAIIQLGLQGGFRRSELADIKVQYVNFLRNKLKVRLPYSKSNQQGQR
EWKDLPDHEPFAALDAVKNWLSLANIEDGHLFRSLSRDGKNLRPYQMKDRHSGSSSLLNKNSGFLTGDDIYRIIKKYCTK
AGLPAKFYGAHSLRSGCVTQLHENNKDHLYIMARTGHTDPRSLRHYLKPKD

Sequences:

>Translated_371_residues
MSKMIRTNSNAQNNTNISNERATGSGHHHNNRAEQPRFFEETFLPQSVRNDYLSAAEETEYEISVNTRRVYNTSFSVFSR
YCAEHQLQALPADPRSVISFIGHQKELIQESTGVQLSKQTLTTRLAAIRYHHIQAGFHSPTEHPLVIRVMRGLSRNQSRH
VSDYDQQPIMYDEVEMLIQAIDEQVQPLTRARDKAIIQLGLQGGFRRSELADIKVQYVNFLRNKLKVRLPYSKSNQQGQR
EWKDLPDHEPFAALDAVKNWLSLANIEDGHLFRSLSRDGKNLRPYQMKDRHSGSSSLLNKNSGFLTGDDIYRIIKKYCTK
AGLPAKFYGAHSLRSGCVTQLHENNKDHLYIMARTGHTDPRSLRHYLKPKD
>Mature_370_residues
SKMIRTNSNAQNNTNISNERATGSGHHHNNRAEQPRFFEETFLPQSVRNDYLSAAEETEYEISVNTRRVYNTSFSVFSRY
CAEHQLQALPADPRSVISFIGHQKELIQESTGVQLSKQTLTTRLAAIRYHHIQAGFHSPTEHPLVIRVMRGLSRNQSRHV
SDYDQQPIMYDEVEMLIQAIDEQVQPLTRARDKAIIQLGLQGGFRRSELADIKVQYVNFLRNKLKVRLPYSKSNQQGQRE
WKDLPDHEPFAALDAVKNWLSLANIEDGHLFRSLSRDGKNLRPYQMKDRHSGSSSLLNKNSGFLTGDDIYRIIKKYCTKA
GLPAKFYGAHSLRSGCVTQLHENNKDHLYIMARTGHTDPRSLRHYLKPKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 42687; Mature: 42555

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKMIRTNSNAQNNTNISNERATGSGHHHNNRAEQPRFFEETFLPQSVRNDYLSAAEETE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCC
YEISVNTRRVYNTSFSVFSRYCAEHQLQALPADPRSVISFIGHQKELIQESTGVQLSKQT
EEEEECCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCEEHHHH
LTTRLAAIRYHHIQAGFHSPTEHPLVIRVMRGLSRNQSRHVSDYDQQPIMYDEVEMLIQA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
IDEQVQPLTRARDKAIIQLGLQGGFRRSELADIKVQYVNFLRNKLKVRLPYSKSNQQGQR
HHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH
EWKDLPDHEPFAALDAVKNWLSLANIEDGHLFRSLSRDGKNLRPYQMKDRHSGSSSLLNK
HHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCC
NSGFLTGDDIYRIIKKYCTKAGLPAKFYGAHSLRSGCVTQLHENNKDHLYIMARTGHTDP
CCCCCCHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH
RSLRHYLKPKD
HHHHHHCCCCC
>Mature Secondary Structure 
SKMIRTNSNAQNNTNISNERATGSGHHHNNRAEQPRFFEETFLPQSVRNDYLSAAEETE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCC
YEISVNTRRVYNTSFSVFSRYCAEHQLQALPADPRSVISFIGHQKELIQESTGVQLSKQT
EEEEECCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCEEHHHH
LTTRLAAIRYHHIQAGFHSPTEHPLVIRVMRGLSRNQSRHVSDYDQQPIMYDEVEMLIQA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
IDEQVQPLTRARDKAIIQLGLQGGFRRSELADIKVQYVNFLRNKLKVRLPYSKSNQQGQR
HHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH
EWKDLPDHEPFAALDAVKNWLSLANIEDGHLFRSLSRDGKNLRPYQMKDRHSGSSSLLNK
HHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCC
NSGFLTGDDIYRIIKKYCTKAGLPAKFYGAHSLRSGCVTQLHENNKDHLYIMARTGHTDP
CCCCCCHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH
RSLRHYLKPKD
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11073919 [H]