Click here to switch to the map view.

The map label for this gene is ybiT [H]

Identifier: 160875465

GI number: 160875465

Start: 2774313

End: 2775923

Strand: Direct

Name: ybiT [H]

Synonym: Sbal195_2353

Alternate gene names: 160875465

Gene position: 2774313-2775923 (Clockwise)

Preceding gene: 160875463

Following gene: 160875469

Centisome position: 51.88

GC content: 46.87

Gene sequence:

>1611_bases
TTGATCTCTACCGCGAACATCACGATGCAGTTTGGCCCTGAGCCATTGTTTGAAAACATTTCAGCGAAATTTGGCAATGG
TCACCGCTATGGTTTGATCGGCGCGAATGGCTGTGGCAAATCGACCTTTATGAAGATCCTCAGCGGAGCTTTAGCGCCAA
CTTCTGGCAATGTGTCCATCACGCCCGGCTTAAAAGTCGGTACCCTAAGCCAAGATCAGTTCGCGTTTGAACAATACAGT
GTGATCGATGCGGTGATCATGGGGGATGTAGCCCTGTGGAAAGTCAAACAGGAACGCGATGCAATTTACGCTAATCCAAA
TATGACTGAAGAAGATGGCATGCGTGTTGGCGATCTTGAAAGTGAATTTGCCGAAATGGATGGCTACAGCGCCGAAAGCC
GCGCCGGTGAAATCCTACTCGAAGCGGGTATTGAAGAATCTTTCCATTACGGCCTAATGCAACAAGTGGCACCGGGCTGG
AAACTACGAGTCCTGTTGGCACAAGCGCTATTTGCCAATCCAGATATTCTGCTGCTCGACGAACCAACCAACAACTTGGA
CATCCATACCATTAGCTGGTTAGAAGCCGAGTTGAACAAACGTAAATGCACCATGATCATTATTTCCCATGATAGGCATT
TCTTGAATGCCGTCTGTACCCACATGGCCGATATCGATTACGGCGAACTGCGTATTTATCCTGGTAACTACGAATACTTC
CTCGCCCAATCCTCTTTGATCCGTGAGCAATTATTGTCGGGCAACGCCAAGAAGAGTGCTGAAATCGAAGAACTGCAAGA
CTTCGTTAACCGCTTTGGTGCCAACGCCTCTAAAGCGAAGCAAGCTAGCTCGCGCGCTAAAAAGATGGACAAGATTAAAC
TCGATGATGTGAAATCATCTAGCCGTATCCACCCTTCTATTCGTTTTGATGCCGGCAAAAAAATGCATCGCCAAGCGCTG
ATCCTCGAAGATCTCGCCCACGGGTTTGATGGCGAACAGTTATTCCAAGGCGGCGACTTGATCCTCGAAGCTGGCGCAAA
ATTAGCGATTATCGGTGAGAACGGCGTGGGTAAAACCACTTTTCTTCGCTGCTTAGTCAATGATTTAGAGCATAATAAAG
GCGTTATCAAGTGGTCAGAAAACGCATCAATCGGCTACTGTCCACAAGACAGCAGTGACGAATTTGATAATGACTACACA
TTAATGGATTGGATGTCACAGTGGCGCCAACCTAAGCACAACGATCTGATGGTACGCGCCATGTTAGGCCGTCTGCTGTT
CACCGAGGATGACGCCAACAAGAAAGCCCGTAACTGTTCAGGCGGAGAGAAAAACCGCTTGTTATTCGGCAAGTTAATGA
TGCAAGACATCAACGTGCTGATCATGGACGAACCGACTAACCACATGGACATGGAAGCCATCGAAGCGCTAAACAATGCG
TTGAAAGATTTTGAAGGCACTCTGATATTTGTCAGCCATGACCGTGAGTTTGTATCGTCACTCGCTACACGTATCATTGA
TATTAAAGATAAAAAAATAATTAACTTCCAAGGTACCTTCGATGAGTACATTTCAAGCCAAGCTGAAATGGAAGCGAGAA
AAAGCGCATAG

Upstream 100 bases:

>100_bases
TCCCAACTTTACTATTTTGGCTTAGAGTGGGTGAAGCGCATGTTTCATTTTGAGGCTTGTTTGTCACAATCCCCGTTAGC
AAATACCTAGGAAAGCTCCT

Downstream 100 bases:

>100_bases
TATTATTCGGCTAACTTACGCCGATTAACCTAGCGTTATCGCATTAAAGAGTCGTCATTGGTTATCCAGTGACGACTTTT
TTATTGGGCTAAATAATGAT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MISTANITMQFGPEPLFENISAKFGNGHRYGLIGANGCGKSTFMKILSGALAPTSGNVSITPGLKVGTLSQDQFAFEQYS
VIDAVIMGDVALWKVKQERDAIYANPNMTEEDGMRVGDLESEFAEMDGYSAESRAGEILLEAGIEESFHYGLMQQVAPGW
KLRVLLAQALFANPDILLLDEPTNNLDIHTISWLEAELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF
LAQSSLIREQLLSGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKKMDKIKLDDVKSSSRIHPSIRFDAGKKMHRQAL
ILEDLAHGFDGEQLFQGGDLILEAGAKLAIIGENGVGKTTFLRCLVNDLEHNKGVIKWSENASIGYCPQDSSDEFDNDYT
LMDWMSQWRQPKHNDLMVRAMLGRLLFTEDDANKKARNCSGGEKNRLLFGKLMMQDINVLIMDEPTNHMDMEAIEALNNA
LKDFEGTLIFVSHDREFVSSLATRIIDIKDKKIINFQGTFDEYISSQAEMEARKSA

Sequences:

>Translated_536_residues
MISTANITMQFGPEPLFENISAKFGNGHRYGLIGANGCGKSTFMKILSGALAPTSGNVSITPGLKVGTLSQDQFAFEQYS
VIDAVIMGDVALWKVKQERDAIYANPNMTEEDGMRVGDLESEFAEMDGYSAESRAGEILLEAGIEESFHYGLMQQVAPGW
KLRVLLAQALFANPDILLLDEPTNNLDIHTISWLEAELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF
LAQSSLIREQLLSGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKKMDKIKLDDVKSSSRIHPSIRFDAGKKMHRQAL
ILEDLAHGFDGEQLFQGGDLILEAGAKLAIIGENGVGKTTFLRCLVNDLEHNKGVIKWSENASIGYCPQDSSDEFDNDYT
LMDWMSQWRQPKHNDLMVRAMLGRLLFTEDDANKKARNCSGGEKNRLLFGKLMMQDINVLIMDEPTNHMDMEAIEALNNA
LKDFEGTLIFVSHDREFVSSLATRIIDIKDKKIINFQGTFDEYISSQAEMEARKSA
>Mature_536_residues
MISTANITMQFGPEPLFENISAKFGNGHRYGLIGANGCGKSTFMKILSGALAPTSGNVSITPGLKVGTLSQDQFAFEQYS
VIDAVIMGDVALWKVKQERDAIYANPNMTEEDGMRVGDLESEFAEMDGYSAESRAGEILLEAGIEESFHYGLMQQVAPGW
KLRVLLAQALFANPDILLLDEPTNNLDIHTISWLEAELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF
LAQSSLIREQLLSGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKKMDKIKLDDVKSSSRIHPSIRFDAGKKMHRQAL
ILEDLAHGFDGEQLFQGGDLILEAGAKLAIIGENGVGKTTFLRCLVNDLEHNKGVIKWSENASIGYCPQDSSDEFDNDYT
LMDWMSQWRQPKHNDLMVRAMLGRLLFTEDDANKKARNCSGGEKNRLLFGKLMMQDINVLIMDEPTNHMDMEAIEALNNA
LKDFEGTLIFVSHDREFVSSLATRIIDIKDKKIINFQGTFDEYISSQAEMEARKSA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=30.1318267419962, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI10947137, Length=538, Percent_Identity=27.6951672862454, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI27881506, Length=538, Percent_Identity=27.6951672862454, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI10947135, Length=528, Percent_Identity=27.4621212121212, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI69354671, Length=523, Percent_Identity=27.3422562141491, Blast_Score=196, Evalue=5e-50,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=64.0151515151515, Blast_Score=721, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=525, Percent_Identity=30.4761904761905, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=31.5175097276265, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI2367384, Length=520, Percent_Identity=30.3846153846154, Blast_Score=222, Evalue=5e-59,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=28.755364806867, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1786398, Length=248, Percent_Identity=28.6290322580645, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788165, Length=185, Percent_Identity=26.4864864864865, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787370, Length=223, Percent_Identity=24.6636771300448, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788450, Length=249, Percent_Identity=24.8995983935743, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789032, Length=197, Percent_Identity=29.4416243654822, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790525, Length=233, Percent_Identity=23.6051502145923, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787105, Length=236, Percent_Identity=26.6949152542373, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=542, Percent_Identity=29.7047970479705, Blast_Score=242, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI17553372, Length=536, Percent_Identity=30.9701492537313, Blast_Score=241, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI17559834, Length=529, Percent_Identity=26.2759924385633, Blast_Score=213, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=29.608938547486, Blast_Score=244, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6321121, Length=533, Percent_Identity=29.4559099437148, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6323278, Length=413, Percent_Identity=23.728813559322, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6324314, Length=413, Percent_Identity=24.455205811138, Blast_Score=108, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6325030, Length=394, Percent_Identity=24.6192893401015, Blast_Score=107, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24666836, Length=532, Percent_Identity=29.5112781954887, Blast_Score=249, Evalue=3e-66,
Organism=Drosophila melanogaster, GI24642252, Length=547, Percent_Identity=28.8848263254113, Blast_Score=242, Evalue=5e-64,
Organism=Drosophila melanogaster, GI18859989, Length=547, Percent_Identity=28.8848263254113, Blast_Score=242, Evalue=5e-64,
Organism=Drosophila melanogaster, GI24641342, Length=537, Percent_Identity=29.0502793296089, Blast_Score=227, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59915; Mature: 59915

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTANITMQFGPEPLFENISAKFGNGHRYGLIGANGCGKSTFMKILSGALAPTSGNVSI
CCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE
TPGLKVGTLSQDQFAFEQYSVIDAVIMGDVALWKVKQERDAIYANPNMTEEDGMRVGDLE
CCCCEECCCCCHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEECCCCCHHCCCEECCHH
SEFAEMDGYSAESRAGEILLEAGIEESFHYGLMQQVAPGWKLRVLLAQALFANPDILLLD
HHHHHHCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIHTISWLEAELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF
CCCCCCEEEEEHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCEEE
LAQSSLIREQLLSGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKKMDKIKLDDVKSS
EHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
SRIHPSIRFDAGKKMHRQALILEDLAHGFDGEQLFQGGDLILEAGAKLAIIGENGVGKTT
CCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCEEEEEECCCCCHHH
FLRCLVNDLEHNKGVIKWSENASIGYCPQDSSDEFDNDYTLMDWMSQWRQPKHNDLMVRA
HHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
MLGRLLFTEDDANKKARNCSGGEKNRLLFGKLMMQDINVLIMDEPTNHMDMEAIEALNNA
HHHHHEECCCCCCCHHCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LKDFEGTLIFVSHDREFVSSLATRIIDIKDKKIINFQGTFDEYISSQAEMEARKSA
HHHCCCEEEEEECCHHHHHHHHHHHEECCCCEEEEECCCHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MISTANITMQFGPEPLFENISAKFGNGHRYGLIGANGCGKSTFMKILSGALAPTSGNVSI
CCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE
TPGLKVGTLSQDQFAFEQYSVIDAVIMGDVALWKVKQERDAIYANPNMTEEDGMRVGDLE
CCCCEECCCCCHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEECCCCCHHCCCEECCHH
SEFAEMDGYSAESRAGEILLEAGIEESFHYGLMQQVAPGWKLRVLLAQALFANPDILLLD
HHHHHHCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIHTISWLEAELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF
CCCCCCEEEEEHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCEEE
LAQSSLIREQLLSGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKKMDKIKLDDVKSS
EHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
SRIHPSIRFDAGKKMHRQALILEDLAHGFDGEQLFQGGDLILEAGAKLAIIGENGVGKTT
CCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCEEEEEECCCCCHHH
FLRCLVNDLEHNKGVIKWSENASIGYCPQDSSDEFDNDYTLMDWMSQWRQPKHNDLMVRA
HHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
MLGRLLFTEDDANKKARNCSGGEKNRLLFGKLMMQDINVLIMDEPTNHMDMEAIEALNNA
HHHHHEECCCCCCCHHCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LKDFEGTLIFVSHDREFVSSLATRIIDIKDKKIINFQGTFDEYISSQAEMEARKSA
HHHCCCEEEEEECCHHHHHHHHHHHEECCCCEEEEECCCHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]