| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875420
Identifier: 160875420
GI number: 160875420
Start: 2728183
End: 2728521
Strand: Reverse
Name: 160875420
Synonym: Sbal195_2308
Alternate gene names: NA
Gene position: 2728521-2728183 (Counterclockwise)
Preceding gene: 160875423
Following gene: 160875418
Centisome position: 51.03
GC content: 47.49
Gene sequence:
>339_bases GTGGTTCAACATGAATATACCGCCAATGCCTGCCAGCAATGGCAAGCAACATCAACCAGTGATGGTTATTACCGCCTGAA ATCAAAGCCGCTAACGGTAAACAAACAATCCCAATGCTTGGTGAGTGTTGATGGCAACTTGCATCTGGGTGGTTACGAGC AGGCGGACAGTGAATGGCGAACTGAGTTTATGCCAAACGGTTCACTGCGAGTGGTATCGCGTAAGGGCGGTTCATCGATG AAAGTGGCAGGCGAGTCCTATGCCAATGGCGATAATATCGTTGAGGATGTCTGGAAAAATACAATTTCGCAGCAGTTCTA TTTCAGAGAGGTGAAATAG
Upstream 100 bases:
>100_bases ACCAGATTAACCACGCCACCCCAAAATCGGCACAAGCGAAACTTTTCAACCCTTTAAGTGGGATGAAAGGCCTGCCTAAC TTTGGTGAGCCAATGTCAAT
Downstream 100 bases:
>100_bases CAACAAATAGTTTGTAACGGGTGCTTGAAATGTCGTTTGAGTTGAGGTCGCTTAACGACATCTTGGTTGAGCCAGCGTTG CTCGGCGCTAAGCAGTAACT
Product: alpha-N-arabinofuranosidase
Products: NA
Alternate protein names: Alpha-N-Arabinofuranosidase; Glycoside Hydrolase Family
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MVQHEYTANACQQWQATSTSDGYYRLKSKPLTVNKQSQCLVSVDGNLHLGGYEQADSEWRTEFMPNGSLRVVSRKGGSSM KVAGESYANGDNIVEDVWKNTISQQFYFREVK
Sequences:
>Translated_112_residues MVQHEYTANACQQWQATSTSDGYYRLKSKPLTVNKQSQCLVSVDGNLHLGGYEQADSEWRTEFMPNGSLRVVSRKGGSSM KVAGESYANGDNIVEDVWKNTISQQFYFREVK >Mature_112_residues MVQHEYTANACQQWQATSTSDGYYRLKSKPLTVNKQSQCLVSVDGNLHLGGYEQADSEWRTEFMPNGSLRVVSRKGGSSM KVAGESYANGDNIVEDVWKNTISQQFYFREVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12663; Mature: 12663
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQHEYTANACQQWQATSTSDGYYRLKSKPLTVNKQSQCLVSVDGNLHLGGYEQADSEWR CCCCCCCCHHHHCCCCCCCCCCEEEECCCCEEECCCCCEEEEECCCEEECCCCCCCCCHH TEFMPNGSLRVVSRKGGSSMKVAGESYANGDNIVEDVWKNTISQQFYFREVK HHCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MVQHEYTANACQQWQATSTSDGYYRLKSKPLTVNKQSQCLVSVDGNLHLGGYEQADSEWR CCCCCCCCHHHHCCCCCCCCCCEEEECCCCEEECCCCCEEEEECCCEEECCCCCCCCCHH TEFMPNGSLRVVSRKGGSSMKVAGESYANGDNIVEDVWKNTISQQFYFREVK HHCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA