| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875415
Identifier: 160875415
GI number: 160875415
Start: 2722700
End: 2723818
Strand: Reverse
Name: 160875415
Synonym: Sbal195_2303
Alternate gene names: NA
Gene position: 2723818-2722700 (Counterclockwise)
Preceding gene: 160875417
Following gene: 160875414
Centisome position: 50.94
GC content: 42.0
Gene sequence:
>1119_bases ATGCAACAAGACCATCCTGCTGGCGGTTTACCGCTTGTAGGTCGTCATGTCATTGAGCGGTTTGAATTGGAAACTGGGGA GCATTTACCGCCCTCGGTCAATCAAAAAATTCTCGAAGGGTCATTTAGTACCAAGCTAACAATCCGTTGTGATGGACAGC GGGTGAGGGTGGAAGGTAATCCGTCACGTTGGCAACGTATGGACAATCTTTTTGGTTTAAAGACACTGGATGAATGTGTG GCAATTTTTAATCACGTGCTAGCTCAATATCATTTGCCACCATTTACTAAAAATACCCACATCCAATATAGACAATCGCC CAATGGTAAAGCCGCGCAACTAGTTGGTAATGGTGCTGAAATCACCGCAATCGACTGGACGGTTAATCATCAAGTAGGCA AGGGCAAAGAGGCCTCATTTATCCGTGGTATGTCGTCTATGCAAATTGGCCGAGGTCGTAAACCCAAACTTTATCCGGAC GGCCATACCTGCAATTGGGGTGAAGGTTCTACATGGATAATGACCAAGCTGTATAACAAAGCTGTTGAGTTACAACGGCA TTTAAACAAAGAACTCCGTAAAAAAGCCGGTGTTCCAATCGAGAGACTTAACTATCTAGAAAACTTAATTAAATACTGTG AAGAAACAGGTGTAATACGCGAAGAACACAGCTTAAGACAGGCATTGCTAAAACGTCATTCGTTGCAATTTTATGGCCGA GTCACTGAACAAGACTTTTATCCGCACCTTATAGACATTGAGAACGCTATGAAAACAATTCAAATATCACACGATGAACA TCAGACTATTGCTGACCAATTAATCTCTCTAGGTGTTGTTAAAAGTCGCCAAGCGGCAAACACAACTCAATCCTATGCAT TAATTTGGCAACACGGTACCGACGTTAGAAAAGAGCTAAGTAATTCTAACTATTACGTCCATAAAGCACGATTAAAAGCT ATTGGTATCGATATCGGTCAACAGTTCGATGTGAGCCGTATGTGTCCAACACTAAAGCGTTCTGAAGTTATTGAAGTTAA ACCGCTAATTGTTCCGCACTGGTATCAATTACCGATAGTTGCACAATCCAATATTTTACCGTTCAAAGCCTACGCATAG
Upstream 100 bases:
>100_bases TTTCACTCGCACCTTGCAATACATTTAAATGAACCTTAAAGTATATAAAAATGTACTTGACAGGTTTTTTTACTAATTGT TTTTCATCGACCGTTTATTC
Downstream 100 bases:
>100_bases GAGCAATGTTCATGCTTAAAATTGAAGTCTTTCAGGAAGATGTCACCGTAACTGCTCGCAACATGCCATCTAAAGACGGT AAGCCAGGGCGAACCATTTA
Product: replication protein gene II/X
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MQQDHPAGGLPLVGRHVIERFELETGEHLPPSVNQKILEGSFSTKLTIRCDGQRVRVEGNPSRWQRMDNLFGLKTLDECV AIFNHVLAQYHLPPFTKNTHIQYRQSPNGKAAQLVGNGAEITAIDWTVNHQVGKGKEASFIRGMSSMQIGRGRKPKLYPD GHTCNWGEGSTWIMTKLYNKAVELQRHLNKELRKKAGVPIERLNYLENLIKYCEETGVIREEHSLRQALLKRHSLQFYGR VTEQDFYPHLIDIENAMKTIQISHDEHQTIADQLISLGVVKSRQAANTTQSYALIWQHGTDVRKELSNSNYYVHKARLKA IGIDIGQQFDVSRMCPTLKRSEVIEVKPLIVPHWYQLPIVAQSNILPFKAYA
Sequences:
>Translated_372_residues MQQDHPAGGLPLVGRHVIERFELETGEHLPPSVNQKILEGSFSTKLTIRCDGQRVRVEGNPSRWQRMDNLFGLKTLDECV AIFNHVLAQYHLPPFTKNTHIQYRQSPNGKAAQLVGNGAEITAIDWTVNHQVGKGKEASFIRGMSSMQIGRGRKPKLYPD GHTCNWGEGSTWIMTKLYNKAVELQRHLNKELRKKAGVPIERLNYLENLIKYCEETGVIREEHSLRQALLKRHSLQFYGR VTEQDFYPHLIDIENAMKTIQISHDEHQTIADQLISLGVVKSRQAANTTQSYALIWQHGTDVRKELSNSNYYVHKARLKA IGIDIGQQFDVSRMCPTLKRSEVIEVKPLIVPHWYQLPIVAQSNILPFKAYA >Mature_372_residues MQQDHPAGGLPLVGRHVIERFELETGEHLPPSVNQKILEGSFSTKLTIRCDGQRVRVEGNPSRWQRMDNLFGLKTLDECV AIFNHVLAQYHLPPFTKNTHIQYRQSPNGKAAQLVGNGAEITAIDWTVNHQVGKGKEASFIRGMSSMQIGRGRKPKLYPD GHTCNWGEGSTWIMTKLYNKAVELQRHLNKELRKKAGVPIERLNYLENLIKYCEETGVIREEHSLRQALLKRHSLQFYGR VTEQDFYPHLIDIENAMKTIQISHDEHQTIADQLISLGVVKSRQAANTTQSYALIWQHGTDVRKELSNSNYYVHKARLKA IGIDIGQQFDVSRMCPTLKRSEVIEVKPLIVPHWYQLPIVAQSNILPFKAYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42487; Mature: 42487
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQDHPAGGLPLVGRHVIERFELETGEHLPPSVNQKILEGSFSTKLTIRCDGQRVRVEGN CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCEEEECCC PSRWQRMDNLFGLKTLDECVAIFNHVLAQYHLPPFTKNTHIQYRQSPNGKAAQLVGNGAE HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCE ITAIDWTVNHQVGKGKEASFIRGMSSMQIGRGRKPKLYPDGHTCNWGEGSTWIMTKLYNK EEEEEEEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHH AVELQRHLNKELRKKAGVPIERLNYLENLIKYCEETGVIREEHSLRQALLKRHSLQFYGR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHEEE VTEQDFYPHLIDIENAMKTIQISHDEHQTIADQLISLGVVKSRQAANTTQSYALIWQHGT CCCCCCCCCEEEHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEEECCC DVRKELSNSNYYVHKARLKAIGIDIGQQFDVSRMCPTLKRSEVIEVKPLIVPHWYQLPIV HHHHHHCCCCEEEEEEEEEEEECCCCCCCCHHHHCCCCCCCCEEEECCEECCCCEECEEE AQSNILPFKAYA ECCCCCCEECCC >Mature Secondary Structure MQQDHPAGGLPLVGRHVIERFELETGEHLPPSVNQKILEGSFSTKLTIRCDGQRVRVEGN CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCEEEECCC PSRWQRMDNLFGLKTLDECVAIFNHVLAQYHLPPFTKNTHIQYRQSPNGKAAQLVGNGAE HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCE ITAIDWTVNHQVGKGKEASFIRGMSSMQIGRGRKPKLYPDGHTCNWGEGSTWIMTKLYNK EEEEEEEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHH AVELQRHLNKELRKKAGVPIERLNYLENLIKYCEETGVIREEHSLRQALLKRHSLQFYGR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHEEE VTEQDFYPHLIDIENAMKTIQISHDEHQTIADQLISLGVVKSRQAANTTQSYALIWQHGT CCCCCCCCCEEEHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEEECCC DVRKELSNSNYYVHKARLKAIGIDIGQQFDVSRMCPTLKRSEVIEVKPLIVPHWYQLPIV HHHHHHCCCCEEEEEEEEEEEECCCCCCCCHHHHCCCCCCCCEEEECCEECCCCEECEEE AQSNILPFKAYA ECCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA