| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875354
Identifier: 160875354
GI number: 160875354
Start: 2664740
End: 2666893
Strand: Direct
Name: 160875354
Synonym: Sbal195_2242
Alternate gene names: NA
Gene position: 2664740-2666893 (Clockwise)
Preceding gene: 160875351
Following gene: 160875355
Centisome position: 49.83
GC content: 37.0
Gene sequence:
>2154_bases ATGTGCAGGATTGATTCGCCTTTCGGCAATATCAGCCTTGATGAAAAAAATGACCCCACGGATCGCTTCTTACAAGCTGT AGATGAGAACTGTATTGATGACGATTTTCGTGAATTATTCATAAAATATTTTCAAAATAATTGGCAAAGTGCATTTAGTA CACCTTCTGAAATAGAAGATGTTCTGAAGAAAGCTAATCAGGAAAACTCGATTTCTGATAAATGCTTATTTTTACTGGTT TCTTATGAAGCAAAGCTATCGTTCGCCTTCATTAGTTACCAGATTAGCGGAAAAACACCCAGATCTCTATTTTATGACTT TTTAGTTGAAGTTAAAAACTCATACTTCGCATCTTCTCCATTAGCGTTATACCGAGGGGGGATGAAAACTGTCACACACA ACTATTTTCAATTTTTGTGCTGGCTATACGGTGAAGACTATTGTTATTCAAAAGCGTTCTTTGAGGATGAGGCGCTTGAT GAGCTGAGTGGACAAGACCGAGCAAGATTTTTTTGGAACTTTTTCGAGTCAATCTCACTTAGCTTTTTAATGCTCGATGA GCATCAAAGGGCAAATGAGTTAATACGTATTAGCTCTTCAACTGACGATTATGTAGGTCCACTTACAATCGGGGCTAAGA GCTTAGCTAATGGATTGGATTTCATTAGTGCCTGGGCTAAATTTGAATCACAAAGAGCAAAAAATTCTTATAGTTTGCAT GATATTTTTTATGGATATTATTCGCACTGGAAAGATATTCTAAATTTAGCTCGTGATGAAGTAACTGGTAGCTCTGATAT TACAAAGCATCTTAAAAAATGGCTCGATGACTTTCGTTATGATTGCATAAAACTTTCGCTAATAAACACTGATTTAACCA AGGCATCTAAAGATGAAATAGGAGTGTGGGTTGGCAAGGTTGAAAGTTATTTAATCCATATATATTCCGGTTTTTCTTGG GACGAGCTGAATAGTGACGAGTTTAAAAGCTTCGAGAAAAAAAAGTTTAATGAATTATGTGCCGAGTTCAGTCATGTTCA AATGAGTAAATGGATTGAATGGTCAATACAAGATGATTTTACTAAGATTCTTGGGACTAACCTCAACTCGCTTAAACAGT TAAATGCATATCACAGTAAATGGGTGACAAAGGAATACTTTGATCTTTGGAAAACATTATTTTTAGAGGAGATAAACAGG CTAAATATTGAAGAACGGTTAACAATTCTTTCTTGCATGCCTCCTTATACAGAAGATTATTATACAGAAGGGTTTCAATG GTGGTTTGAACTATTTACTGGCCTAGTTGACTCAGATAGTTTCCCAAAGCACTTAATACCATCTTGGACATGCGTCGCAC TGAATTTAAAAGTTAGGGATGAGGCTCTTCCTTATGTCGATAAAAGCATTGGGATTTTGCGAGGAGAATTATCTGCACCT GATAAAACAAATGATGAAATAAAAGAGCATCATAAACATCTCTCTTGTTTATTACCTGCCATCGATAGAATATCGACTCA AAAAGGGGTTCGCCATCGTTTAATGTTGCAACGCTTTTCAGCAGTACCTTATTCTGATGAAAAATTATTGATGTACAGCG GCGCTCTTTATCAAGGTCACTTCTACGATTGGTATACACCATTTAATGATTTGGCTAGTCGATGGTTCTGTCATCAACAC AACCATAAGGTACAAAATAGGCATACGATCGATGAAGAATTTGAACATAAATTTTATACAGAATTTGCTTGTGAACTTTC TGATTTTTTCCTGACTCGGCTGCGTCTTCGTAAAGGGGAAAAAGTGGAAGGCGATCGATATGACTCTAGTCAAGTAATAG AAAAATCCTCAGTCTGGAGGCAAGGTTATTTGAAAGCCTTAACTGAATTGGGTTTTGACCTTAATGGTAAGGTTCATAAA ACGGTTAACTTTACTAAAAAGTTTGATCCTGATGAGAGTGTTCGATCTATTGCGAGTGAATGTTATAAGGCAGTTCGTCG ACACGCTAAGAAAAGCCCGTCAACTCAAGATATAAAACGAGGCATAGTAGCAGCAGAATGGTGGTTACTTATGTGTCAGC GGCATGAACTCGGTCTTGAGGTCAAACACGAAGAGGCTCTTAAAACAAGGCGTAACTTAATGCGCCATCCATAG
Upstream 100 bases:
>100_bases TTTTCCGCTCCCATCTTTTGCACGGGAGGTTTCAACTGCAAACCGGATATAGATCCGGATTCTTAATGTGAAACCTAATT CTCATGACATGGAGAAAACT
Downstream 100 bases:
>100_bases ATTACCAATATTTTAACCAACCAAACGTGGTGTACTGGAGCCTGATGCTCCTGTTGACGCTAGTCGTCCGCTATGTATCA GCTTTTCAGACCTGTATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 717; Mature: 717
Protein sequence:
>717_residues MCRIDSPFGNISLDEKNDPTDRFLQAVDENCIDDDFRELFIKYFQNNWQSAFSTPSEIEDVLKKANQENSISDKCLFLLV SYEAKLSFAFISYQISGKTPRSLFYDFLVEVKNSYFASSPLALYRGGMKTVTHNYFQFLCWLYGEDYCYSKAFFEDEALD ELSGQDRARFFWNFFESISLSFLMLDEHQRANELIRISSSTDDYVGPLTIGAKSLANGLDFISAWAKFESQRAKNSYSLH DIFYGYYSHWKDILNLARDEVTGSSDITKHLKKWLDDFRYDCIKLSLINTDLTKASKDEIGVWVGKVESYLIHIYSGFSW DELNSDEFKSFEKKKFNELCAEFSHVQMSKWIEWSIQDDFTKILGTNLNSLKQLNAYHSKWVTKEYFDLWKTLFLEEINR LNIEERLTILSCMPPYTEDYYTEGFQWWFELFTGLVDSDSFPKHLIPSWTCVALNLKVRDEALPYVDKSIGILRGELSAP DKTNDEIKEHHKHLSCLLPAIDRISTQKGVRHRLMLQRFSAVPYSDEKLLMYSGALYQGHFYDWYTPFNDLASRWFCHQH NHKVQNRHTIDEEFEHKFYTEFACELSDFFLTRLRLRKGEKVEGDRYDSSQVIEKSSVWRQGYLKALTELGFDLNGKVHK TVNFTKKFDPDESVRSIASECYKAVRRHAKKSPSTQDIKRGIVAAEWWLLMCQRHELGLEVKHEEALKTRRNLMRHP
Sequences:
>Translated_717_residues MCRIDSPFGNISLDEKNDPTDRFLQAVDENCIDDDFRELFIKYFQNNWQSAFSTPSEIEDVLKKANQENSISDKCLFLLV SYEAKLSFAFISYQISGKTPRSLFYDFLVEVKNSYFASSPLALYRGGMKTVTHNYFQFLCWLYGEDYCYSKAFFEDEALD ELSGQDRARFFWNFFESISLSFLMLDEHQRANELIRISSSTDDYVGPLTIGAKSLANGLDFISAWAKFESQRAKNSYSLH DIFYGYYSHWKDILNLARDEVTGSSDITKHLKKWLDDFRYDCIKLSLINTDLTKASKDEIGVWVGKVESYLIHIYSGFSW DELNSDEFKSFEKKKFNELCAEFSHVQMSKWIEWSIQDDFTKILGTNLNSLKQLNAYHSKWVTKEYFDLWKTLFLEEINR LNIEERLTILSCMPPYTEDYYTEGFQWWFELFTGLVDSDSFPKHLIPSWTCVALNLKVRDEALPYVDKSIGILRGELSAP DKTNDEIKEHHKHLSCLLPAIDRISTQKGVRHRLMLQRFSAVPYSDEKLLMYSGALYQGHFYDWYTPFNDLASRWFCHQH NHKVQNRHTIDEEFEHKFYTEFACELSDFFLTRLRLRKGEKVEGDRYDSSQVIEKSSVWRQGYLKALTELGFDLNGKVHK TVNFTKKFDPDESVRSIASECYKAVRRHAKKSPSTQDIKRGIVAAEWWLLMCQRHELGLEVKHEEALKTRRNLMRHP >Mature_717_residues MCRIDSPFGNISLDEKNDPTDRFLQAVDENCIDDDFRELFIKYFQNNWQSAFSTPSEIEDVLKKANQENSISDKCLFLLV SYEAKLSFAFISYQISGKTPRSLFYDFLVEVKNSYFASSPLALYRGGMKTVTHNYFQFLCWLYGEDYCYSKAFFEDEALD ELSGQDRARFFWNFFESISLSFLMLDEHQRANELIRISSSTDDYVGPLTIGAKSLANGLDFISAWAKFESQRAKNSYSLH DIFYGYYSHWKDILNLARDEVTGSSDITKHLKKWLDDFRYDCIKLSLINTDLTKASKDEIGVWVGKVESYLIHIYSGFSW DELNSDEFKSFEKKKFNELCAEFSHVQMSKWIEWSIQDDFTKILGTNLNSLKQLNAYHSKWVTKEYFDLWKTLFLEEINR LNIEERLTILSCMPPYTEDYYTEGFQWWFELFTGLVDSDSFPKHLIPSWTCVALNLKVRDEALPYVDKSIGILRGELSAP DKTNDEIKEHHKHLSCLLPAIDRISTQKGVRHRLMLQRFSAVPYSDEKLLMYSGALYQGHFYDWYTPFNDLASRWFCHQH NHKVQNRHTIDEEFEHKFYTEFACELSDFFLTRLRLRKGEKVEGDRYDSSQVIEKSSVWRQGYLKALTELGFDLNGKVHK TVNFTKKFDPDESVRSIASECYKAVRRHAKKSPSTQDIKRGIVAAEWWLLMCQRHELGLEVKHEEALKTRRNLMRHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84317; Mature: 84317
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRIDSPFGNISLDEKNDPTDRFLQAVDENCIDDDFRELFIKYFQNNWQSAFSTPSEIED CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH VLKKANQENSISDKCLFLLVSYEAKLSFAFISYQISGKTPRSLFYDFLVEVKNSYFASSP HHHHCCCCCCCCHHHEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC LALYRGGMKTVTHNYFQFLCWLYGEDYCYSKAFFEDEALDELSGQDRARFFWNFFESISL HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCE SFLMLDEHQRANELIRISSSTDDYVGPLTIGAKSLANGLDFISAWAKFESQRAKNSYSLH EEEEECCHHCCCCEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH DIFYGYYSHWKDILNLARDEVTGSSDITKHLKKWLDDFRYDCIKLSLINTDLTKASKDEI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHCCCHHH GVWVGKVESYLIHIYSGFSWDELNSDEFKSFEKKKFNELCAEFSHVQMSKWIEWSIQDDF HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHH TKILGTNLNSLKQLNAYHSKWVTKEYFDLWKTLFLEEINRLNIEERLTILSCMPPYTEDY HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHH YTEGFQWWFELFTGLVDSDSFPKHLIPSWTCVALNLKVRDEALPYVDKSIGILRGELSAP HHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCC DKTNDEIKEHHKHLSCLLPAIDRISTQKGVRHRLMLQRFSAVPYSDEKLLMYSGALYQGH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEECCC FYDWYTPFNDLASRWFCHQHNHKVQNRHTIDEEFEHKFYTEFACELSDFFLTRLRLRKGE CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KVEGDRYDSSQVIEKSSVWRQGYLKALTELGFDLNGKVHKTVNFTKKFDPDESVRSIASE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH CYKAVRRHAKKSPSTQDIKRGIVAAEWWLLMCQRHELGLEVKHEEALKTRRNLMRHP HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCC >Mature Secondary Structure MCRIDSPFGNISLDEKNDPTDRFLQAVDENCIDDDFRELFIKYFQNNWQSAFSTPSEIED CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH VLKKANQENSISDKCLFLLVSYEAKLSFAFISYQISGKTPRSLFYDFLVEVKNSYFASSP HHHHCCCCCCCCHHHEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC LALYRGGMKTVTHNYFQFLCWLYGEDYCYSKAFFEDEALDELSGQDRARFFWNFFESISL HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCE SFLMLDEHQRANELIRISSSTDDYVGPLTIGAKSLANGLDFISAWAKFESQRAKNSYSLH EEEEECCHHCCCCEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH DIFYGYYSHWKDILNLARDEVTGSSDITKHLKKWLDDFRYDCIKLSLINTDLTKASKDEI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHCCCHHH GVWVGKVESYLIHIYSGFSWDELNSDEFKSFEKKKFNELCAEFSHVQMSKWIEWSIQDDF HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHH TKILGTNLNSLKQLNAYHSKWVTKEYFDLWKTLFLEEINRLNIEERLTILSCMPPYTEDY HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHH YTEGFQWWFELFTGLVDSDSFPKHLIPSWTCVALNLKVRDEALPYVDKSIGILRGELSAP HHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCC DKTNDEIKEHHKHLSCLLPAIDRISTQKGVRHRLMLQRFSAVPYSDEKLLMYSGALYQGH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEECCC FYDWYTPFNDLASRWFCHQHNHKVQNRHTIDEEFEHKFYTEFACELSDFFLTRLRLRKGE CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KVEGDRYDSSQVIEKSSVWRQGYLKALTELGFDLNGKVHKTVNFTKKFDPDESVRSIASE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH CYKAVRRHAKKSPSTQDIKRGIVAAEWWLLMCQRHELGLEVKHEEALKTRRNLMRHP HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA