| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875350
Identifier: 160875350
GI number: 160875350
Start: 2658417
End: 2659874
Strand: Direct
Name: 160875350
Synonym: Sbal195_2238
Alternate gene names: NA
Gene position: 2658417-2659874 (Clockwise)
Preceding gene: 160875345
Following gene: 160875351
Centisome position: 49.72
GC content: 40.4
Gene sequence:
>1458_bases ATGAAGTTCTATGTAACAAAAAGCTCGTTCAATTCTATCAATTTGATTAATCTTGTCTCAATAACTGGATTTTTTGAGAT AAAATTTATGTCAGGTCAGTATCTATCACCGCCTGAGTGTCCGTTTAGCACTATCAGTGATGTTATATTTGAGATCCGTA ATCATGGTGATGATCCTAATAAATACATGGATTACATCAGTTCATTTCATATCGAGTATCATTCCTTTGATGAGTTTAGA CGCAGCGTTAAGCCTAGCCTAAATGTTAAATTCTGTTGGTGGTTAGTTCGGCTACATAGAAACAGTTCGCTCATCAATCT CACCCCGTTAGAAAATAAACCGTTACCACTAAACCTGCCTGAGTCCGTAAACCGAGCGCTATCGCAATCTCCTGACTTCA TGACATATTGCCGATTTAATCACTTGCATGAGTTTAGTCGGGTTTTGTCACAGATTGACCGCTACACCACGCATAGTGCG ATGCTCGGAGTGCTTGAGCAAATCGGAGAAAGCGTACATTTTGAGCACTTTAAAAATAATTTGATTGATGATGAAGCTAT ATCGAGTAGTCAGCTAGAGGGCGCTGCAACAACGACGCTGATTGCGAAAGAAATGCTCCGAAAGAAGCGTAGGCCTTGTA CTGATGGTGAGCGGATGATTGTTGGGAATGCTGACTTAATGAATGCAGCGTGGGACCTCAAGGATGAGGCATTCAGTGTT GATTTGATAAAAACCTTACATAGAATGGGTACGCAGTACTTAGAGCAGAAAAACTACACCTCTGGGATGTTTAGAACCAC TGATGATATTGCGGTTATGAACGCTGATGGTGAGGTCGTTCATCAGCCACCAAAGCATGATGCTATTGAGTGCTTATTAT CCCGCGTCGTGAATTGGTTAAACTCGACTGACGATCACATTCATCCGGTTATACAGGCCATTACTCTTCATTTTGTGATT GGCTATGTTCATCCGTTCCGTGATGGTAATGGACGGATAGCAAGAGCTTTGTTTTATTGGTATCTGTTTAAGTGTGGCTA TACGGGTTTCCGCTATATTGCGATTTCAACGCTGTTGAAAAAATCGCCCATTAAATACGGTCAGAGCTATCTGGATTGTG AGCATGACAAGTTAGATTTAACCTATTTTATTCGATATCAGTTAAGTATTATCAATCGTGCCATTACTGAATTCGTTTCT GCATATGAGCGTGCTGCATATCGAATGACTGAATTGGCCGAGCAGTATTCTGATTTAGATGATATTGAGAAAAAAATTAT TGGTTTTGTTGCTGGAGAGCCTCGTTATCAAAAAAAACCGACGATTACAGCCAGGGAGGCCGAAAAACTACTGGGTCTTA GTTATAACACGGTTAAGCAAAAACTTGATGGCATGGTTACTGCTGGAATACTCAGACGTGAAAAAATAGGTAAAGCGACA GAATATTTTTTAGGATGA
Upstream 100 bases:
>100_bases ATTGTCTGCCCGAGATAAAGTGATTAGAGAGATTTACACGTTTGCCCTAACGCAATGCATTCAATGAAGCCTCTGTACAT TAATTACTGTAAAGCCATGA
Downstream 100 bases:
>100_bases ACATCATCAGCTGCGTTGCCACGTGAAGACAGACTGATGAGATTTAACGGAACATACAACTTTATGAAAATGTCTGGCGA CCCTCGTTGGAGTGTGCGTT
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Regulatory Protein
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MKFYVTKSSFNSINLINLVSITGFFEIKFMSGQYLSPPECPFSTISDVIFEIRNHGDDPNKYMDYISSFHIEYHSFDEFR RSVKPSLNVKFCWWLVRLHRNSSLINLTPLENKPLPLNLPESVNRALSQSPDFMTYCRFNHLHEFSRVLSQIDRYTTHSA MLGVLEQIGESVHFEHFKNNLIDDEAISSSQLEGAATTTLIAKEMLRKKRRPCTDGERMIVGNADLMNAAWDLKDEAFSV DLIKTLHRMGTQYLEQKNYTSGMFRTTDDIAVMNADGEVVHQPPKHDAIECLLSRVVNWLNSTDDHIHPVIQAITLHFVI GYVHPFRDGNGRIARALFYWYLFKCGYTGFRYIAISTLLKKSPIKYGQSYLDCEHDKLDLTYFIRYQLSIINRAITEFVS AYERAAYRMTELAEQYSDLDDIEKKIIGFVAGEPRYQKKPTITAREAEKLLGLSYNTVKQKLDGMVTAGILRREKIGKAT EYFLG
Sequences:
>Translated_485_residues MKFYVTKSSFNSINLINLVSITGFFEIKFMSGQYLSPPECPFSTISDVIFEIRNHGDDPNKYMDYISSFHIEYHSFDEFR RSVKPSLNVKFCWWLVRLHRNSSLINLTPLENKPLPLNLPESVNRALSQSPDFMTYCRFNHLHEFSRVLSQIDRYTTHSA MLGVLEQIGESVHFEHFKNNLIDDEAISSSQLEGAATTTLIAKEMLRKKRRPCTDGERMIVGNADLMNAAWDLKDEAFSV DLIKTLHRMGTQYLEQKNYTSGMFRTTDDIAVMNADGEVVHQPPKHDAIECLLSRVVNWLNSTDDHIHPVIQAITLHFVI GYVHPFRDGNGRIARALFYWYLFKCGYTGFRYIAISTLLKKSPIKYGQSYLDCEHDKLDLTYFIRYQLSIINRAITEFVS AYERAAYRMTELAEQYSDLDDIEKKIIGFVAGEPRYQKKPTITAREAEKLLGLSYNTVKQKLDGMVTAGILRREKIGKAT EYFLG >Mature_485_residues MKFYVTKSSFNSINLINLVSITGFFEIKFMSGQYLSPPECPFSTISDVIFEIRNHGDDPNKYMDYISSFHIEYHSFDEFR RSVKPSLNVKFCWWLVRLHRNSSLINLTPLENKPLPLNLPESVNRALSQSPDFMTYCRFNHLHEFSRVLSQIDRYTTHSA MLGVLEQIGESVHFEHFKNNLIDDEAISSSQLEGAATTTLIAKEMLRKKRRPCTDGERMIVGNADLMNAAWDLKDEAFSV DLIKTLHRMGTQYLEQKNYTSGMFRTTDDIAVMNADGEVVHQPPKHDAIECLLSRVVNWLNSTDDHIHPVIQAITLHFVI GYVHPFRDGNGRIARALFYWYLFKCGYTGFRYIAISTLLKKSPIKYGQSYLDCEHDKLDLTYFIRYQLSIINRAITEFVS AYERAAYRMTELAEQYSDLDDIEKKIIGFVAGEPRYQKKPTITAREAEKLLGLSYNTVKQKLDGMVTAGILRREKIGKAT EYFLG
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55977; Mature: 55977
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFYVTKSSFNSINLINLVSITGFFEIKFMSGQYLSPPECPFSTISDVIFEIRNHGDDPN CEEEEECCCCCCEEHEEHEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHH KYMDYISSFHIEYHSFDEFRRSVKPSLNVKFCWWLVRLHRNSSLINLTPLENKPLPLNLP HHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC ESVNRALSQSPDFMTYCRFNHLHEFSRVLSQIDRYTTHSAMLGVLEQIGESVHFEHFKNN HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LIDDEAISSSQLEGAATTTLIAKEMLRKKRRPCTDGERMIVGNADLMNAAWDLKDEAFSV CCCCHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHCCCCHHHHH DLIKTLHRMGTQYLEQKNYTSGMFRTTDDIAVMNADGEVVHQPPKHDAIECLLSRVVNWL HHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHH NSTDDHIHPVIQAITLHFVIGYVHPFRDGNGRIARALFYWYLFKCGYTGFRYIAISTLLK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KSPIKYGQSYLDCEHDKLDLTYFIRYQLSIINRAITEFVSAYERAAYRMTELAEQYSDLD HCCHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DIEKKIIGFVAGEPRYQKKPTITAREAEKLLGLSYNTVKQKLDGMVTAGILRREKIGKAT HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH EYFLG HHHCC >Mature Secondary Structure MKFYVTKSSFNSINLINLVSITGFFEIKFMSGQYLSPPECPFSTISDVIFEIRNHGDDPN CEEEEECCCCCCEEHEEHEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHH KYMDYISSFHIEYHSFDEFRRSVKPSLNVKFCWWLVRLHRNSSLINLTPLENKPLPLNLP HHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC ESVNRALSQSPDFMTYCRFNHLHEFSRVLSQIDRYTTHSAMLGVLEQIGESVHFEHFKNN HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LIDDEAISSSQLEGAATTTLIAKEMLRKKRRPCTDGERMIVGNADLMNAAWDLKDEAFSV CCCCHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHCCCCHHHHH DLIKTLHRMGTQYLEQKNYTSGMFRTTDDIAVMNADGEVVHQPPKHDAIECLLSRVVNWL HHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHH NSTDDHIHPVIQAITLHFVIGYVHPFRDGNGRIARALFYWYLFKCGYTGFRYIAISTLLK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KSPIKYGQSYLDCEHDKLDLTYFIRYQLSIINRAITEFVSAYERAAYRMTELAEQYSDLD HCCHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DIEKKIIGFVAGEPRYQKKPTITAREAEKLLGLSYNTVKQKLDGMVTAGILRREKIGKAT HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH EYFLG HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA