| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875334
Identifier: 160875334
GI number: 160875334
Start: 2636687
End: 2637172
Strand: Direct
Name: 160875334
Synonym: Sbal195_2221
Alternate gene names: NA
Gene position: 2636687-2637172 (Clockwise)
Preceding gene: 160875322
Following gene: 160875336
Centisome position: 49.31
GC content: 39.92
Gene sequence:
>486_bases ATGTTAACATATTGCGTCATAAGGTTAATCTTTGTGCTAAATCGTCCTAATCTCTATTTATTCATCGCGTTAATTCTCAT CAATCTCACAGCTTGTACTGAAGATGCCAAGCAAGTCACACATAAAAGCAGCTCTGATCCTTCTCTCTGTCAATTTTCGA CAGGGGATTGCGTTAAACAAGTGGACGATATCAAACTTGCTATTAGCCTATCGCCAGCGAATGCACCGAGCGAAAAGCCA TTAACATTAAGGCTGTTAGCTTCAACGCCTATCAAAAATGTGCAAATTCGTTTAGAAGGAAGAGATATGTTTATGGGGGT TATTCCTGTAAATGTGAAGCAAACCGATGAAATGACCTATATTGGTCAGATGGTATATGGCTCCTGCAGCAGTGGTTATA TGGTTTGGCGCGGTTTTGTAAGTTTTGAAGCAAATGGCGAAACCAAAGCGACAGTGTTTGATTTTCTTGCGGATAACAAT GGTTAA
Upstream 100 bases:
>100_bases TTGCTCAAATATGAGGTTTCGCAATGATACTTGAGCAATATCAAAAAAGATACCAAAGAAGGGGTGTAGAAAGTTGATCT AGATCAACCTACGCCATAGA
Downstream 100 bases:
>100_bases GACTGGCTAGATATTTATTCGAATCGTCCTCAGCGTATTATTAGAGAGTATTAACTCGGGTGATTAAGGATTAACTATCT TTCCAACTGTCTTTTACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLTYCVIRLIFVLNRPNLYLFIALILINLTACTEDAKQVTHKSSSDPSLCQFSTGDCVKQVDDIKLAISLSPANAPSEKP LTLRLLASTPIKNVQIRLEGRDMFMGVIPVNVKQTDEMTYIGQMVYGSCSSGYMVWRGFVSFEANGETKATVFDFLADNN G
Sequences:
>Translated_161_residues MLTYCVIRLIFVLNRPNLYLFIALILINLTACTEDAKQVTHKSSSDPSLCQFSTGDCVKQVDDIKLAISLSPANAPSEKP LTLRLLASTPIKNVQIRLEGRDMFMGVIPVNVKQTDEMTYIGQMVYGSCSSGYMVWRGFVSFEANGETKATVFDFLADNN G >Mature_161_residues MLTYCVIRLIFVLNRPNLYLFIALILINLTACTEDAKQVTHKSSSDPSLCQFSTGDCVKQVDDIKLAISLSPANAPSEKP LTLRLLASTPIKNVQIRLEGRDMFMGVIPVNVKQTDEMTYIGQMVYGSCSSGYMVWRGFVSFEANGETKATVFDFLADNN G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17812; Mature: 17812
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTYCVIRLIFVLNRPNLYLFIALILINLTACTEDAKQVTHKSSSDPSLCQFSTGDCVKQ CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCHHHHH VDDIKLAISLSPANAPSEKPLTLRLLASTPIKNVQIRLEGRDMFMGVIPVNVKQTDEMTY CCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEEEEECCCCCCCCHHE IGQMVYGSCSSGYMVWRGFVSFEANGETKATVFDFLADNNG EHHHHCCCCCCCEEEEEEEEEEECCCCCHHEEEEEEECCCC >Mature Secondary Structure MLTYCVIRLIFVLNRPNLYLFIALILINLTACTEDAKQVTHKSSSDPSLCQFSTGDCVKQ CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCHHHHH VDDIKLAISLSPANAPSEKPLTLRLLASTPIKNVQIRLEGRDMFMGVIPVNVKQTDEMTY CCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEEEEECCCCCCCCHHE IGQMVYGSCSSGYMVWRGFVSFEANGETKATVFDFLADNNG EHHHHCCCCCCCEEEEEEEEEEECCCCCHHEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA