| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875317
Identifier: 160875317
GI number: 160875317
Start: 2618154
End: 2619053
Strand: Reverse
Name: 160875317
Synonym: Sbal195_2204
Alternate gene names: NA
Gene position: 2619053-2618154 (Counterclockwise)
Preceding gene: 160875320
Following gene: 160875316
Centisome position: 48.98
GC content: 44.89
Gene sequence:
>900_bases TTGAGACAAAATCTAGTAATAATTACATCATTTACCTTAGGGATGAGCTTTTTCGGTCTTTTCGGTTGTGATAATGACCG AAATATCTCAGCAATTTGTAAAAATAATCCTGAAATTTGTGCCGATTTGCATAAGGATGGCTGGTGTTTGGCCGAAAAAA CCAAACTTATCCAGAACCGCTACGAGTTAAAAGACAACGAAAACCCCACAGGCAAACAACTCTATCTGCAATTGACCTAT CTTGAGGATTACAGCCGCTGCATTGAACTCGCCTCTGGCGTGCAGCATATCATCCACACCAATCGCACCGCTGATAGGGC CAGAGCCTTTAGATTAAGCACCCAGAATTTAAGCTTGCTCCAAGATCAAACCCGCGAGCGACAAGATCCTTTCATGTCCT ATTACCAATGGACGCGCTTTGGCGATACCGCAGCGTTAAATCGATTGTTAGAACATGAAAACGCCGGCGAAGTGACTGAC TCTTTCTTACTTGCCCAAGTCGCCACCTATTACAGCAATCGAAATGCCATCAAAGCGCAACAACTCTATCTTAAAGTCTT TGCAGACATCCAATACGATGATTTCGACGTTAACTGGTTACTTGGGATCGCATCAGCCTATCGCCAGCAACAGGTATTCG ATAAAGCCTATATGCTGACGAAGGCAAATTTACTACTTACGCAGCAGAAGTATTCAGAGGAAAAAATGCTAGCCTTGCTC GGTGGCAATAAAACGCTAGCGACTGAACTCGATTTAAAAGCCCAAGCCCTTATCGATGCGCTAAAAAACGGGACTTATTC TCAGAGTCCAGTAAGACAATGGCTTGATCCTCAAGCGGTTGCCCAAGCGCCAACGGCAACCGAAGCTGTGCCGCTTGCGC CTGTCGAAAAAACAGACTAA
Upstream 100 bases:
>100_bases TTGGTCGGCGCCATTGTAATGAAAGTCGCGCTTTGTTGCCAGTAAGATATTTTCTGTAAATCTGTAATTTTATTAGAGAA ATTATCGTTTGGAGAGTGTT
Downstream 100 bases:
>100_bases GCAATCGATGGCAAAATGTTTGCCATCTTGTAATTTTTTACCCAATTAACGCGTAAAAAATGGTGATTTCGCGACCGATG TAAAAAAAATACCTAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MRQNLVIITSFTLGMSFFGLFGCDNDRNISAICKNNPEICADLHKDGWCLAEKTKLIQNRYELKDNENPTGKQLYLQLTY LEDYSRCIELASGVQHIIHTNRTADRARAFRLSTQNLSLLQDQTRERQDPFMSYYQWTRFGDTAALNRLLEHENAGEVTD SFLLAQVATYYSNRNAIKAQQLYLKVFADIQYDDFDVNWLLGIASAYRQQQVFDKAYMLTKANLLLTQQKYSEEKMLALL GGNKTLATELDLKAQALIDALKNGTYSQSPVRQWLDPQAVAQAPTATEAVPLAPVEKTD
Sequences:
>Translated_299_residues MRQNLVIITSFTLGMSFFGLFGCDNDRNISAICKNNPEICADLHKDGWCLAEKTKLIQNRYELKDNENPTGKQLYLQLTY LEDYSRCIELASGVQHIIHTNRTADRARAFRLSTQNLSLLQDQTRERQDPFMSYYQWTRFGDTAALNRLLEHENAGEVTD SFLLAQVATYYSNRNAIKAQQLYLKVFADIQYDDFDVNWLLGIASAYRQQQVFDKAYMLTKANLLLTQQKYSEEKMLALL GGNKTLATELDLKAQALIDALKNGTYSQSPVRQWLDPQAVAQAPTATEAVPLAPVEKTD >Mature_299_residues MRQNLVIITSFTLGMSFFGLFGCDNDRNISAICKNNPEICADLHKDGWCLAEKTKLIQNRYELKDNENPTGKQLYLQLTY LEDYSRCIELASGVQHIIHTNRTADRARAFRLSTQNLSLLQDQTRERQDPFMSYYQWTRFGDTAALNRLLEHENAGEVTD SFLLAQVATYYSNRNAIKAQQLYLKVFADIQYDDFDVNWLLGIASAYRQQQVFDKAYMLTKANLLLTQQKYSEEKMLALL GGNKTLATELDLKAQALIDALKNGTYSQSPVRQWLDPQAVAQAPTATEAVPLAPVEKTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34059; Mature: 34059
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQNLVIITSFTLGMSFFGLFGCDNDRNISAICKNNPEICADLHKDGWCLAEKTKLIQNR CCCCEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHH YELKDNENPTGKQLYLQLTYLEDYSRCIELASGVQHIIHTNRTADRARAFRLSTQNLSLL HHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCCHHHH QDQTRERQDPFMSYYQWTRFGDTAALNRLLEHENAGEVTDSFLLAQVATYYSNRNAIKAQ HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHH QLYLKVFADIQYDDFDVNWLLGIASAYRQQQVFDKAYMLTKANLLLTQQKYSEEKMLALL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCHHHEEEEE GGNKTLATELDLKAQALIDALKNGTYSQSPVRQWLDPQAVAQAPTATEAVPLAPVEKTD CCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRQNLVIITSFTLGMSFFGLFGCDNDRNISAICKNNPEICADLHKDGWCLAEKTKLIQNR CCCCEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHH YELKDNENPTGKQLYLQLTYLEDYSRCIELASGVQHIIHTNRTADRARAFRLSTQNLSLL HHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCCHHHH QDQTRERQDPFMSYYQWTRFGDTAALNRLLEHENAGEVTDSFLLAQVATYYSNRNAIKAQ HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHH QLYLKVFADIQYDDFDVNWLLGIASAYRQQQVFDKAYMLTKANLLLTQQKYSEEKMLALL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCHHHEEEEE GGNKTLATELDLKAQALIDALKNGTYSQSPVRQWLDPQAVAQAPTATEAVPLAPVEKTD CCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA