| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875303
Identifier: 160875303
GI number: 160875303
Start: 2603847
End: 2605025
Strand: Reverse
Name: 160875303
Synonym: Sbal195_2190
Alternate gene names: NA
Gene position: 2605025-2603847 (Counterclockwise)
Preceding gene: 160875304
Following gene: 160875302
Centisome position: 48.72
GC content: 45.55
Gene sequence:
>1179_bases ATGACCAACACACCCCGCTCCACTCATTGGGATATCTTTTGTACCGTCGTCGATAACTATGGCGATATTGGCGTCACTTG GCGTTTAGCCAAACAAATGGCTAATGAGTACCACATTCCCGTTAATTTGTGGGTCGACGACCTCGCAAGCTTCTCGCACA TATTACCGACACTCGATCCACTAAAAACCGCTCAAAGCTTCAATGGTGTGAATATTATTCATTGGACTAAGCCTTTACCC GTAGCGTTTATCGCAGGAGCTGTGCTCATCGAAGCCTTTGCCTGTGAATTACCCGAACAGGTAAAAGCGCAGTTGGTTTA TTTACATCAGAACGACCCCGAATCTGTGCCTATCTGGTTGAATTTAGAGTATTTAAGCGCTGAGGATTGGGTCGAAGGCT GCCATGGTTTGCCTTCATTACAAGCCAATGGTTTAAAGAAGTATTTTTACTTCCCGGGCTTTGGCGCAAAAACCGGTGGG CTCATCTGCGAGCAAGATTTGTTTGCCGAGCGCGATGCTTGGCAAGCTAACTCAGCTAACAAATTACAGCTTTTTAGTCA GCTAGGTCTTAGGGGGATTGAGGCTAAAGATACTGTGATTAGCATCTTTAGCTATGAGACCGAGGCACTGCCGGCATTAT GCGAGTTATGGCAGCAATCGGCCGAGAAAATTCATGCGTTGATCCCCAAGGGTCGCAGCTTAAACAGTCTGACGCATTTA CTGCCCTGTGATATTGCCGCGCTAGTGCCGGGTCAGCAGATAAATCATGGCAATTTAACCCTGCATATTTTACCCATGAC AGACCAACAGGGGTTTGATCGTCTGCTCTGGAGCTGCGATTTTAATATCGTGCGCGGTGAAGATTCCTTTTTACGCGCCC AATGGGCCGCAAAACCCTTCATTTGGCACATTTATCCCCAAGAAGATGATTATCACCTCGTAAAATTAGAAGCTTTTCTC AAACTTTACTGCGATAATCTGCCACCTAAAATTGCTTGTTATTGGTCTGAATTGAATCTTGCGTTCAACCAAGCACAGCA ATCTGCCGTGAGCCTTCACTGGCAAAACCTTAATCCTGTTAATTTGCCCTTGTTGCACCATGCTAAACAATGGCCAATTA ATGCATTAAATGCTGCAGATCTCGCTACTCGACTAGTTCAGTTCGTTAAAAACAGCTAA
Upstream 100 bases:
>100_bases AATTAGAAGACTAATTGGGATAACCATTCGATTAAAGCGGCCTTAACGCCGCTTTTTTTATGCTTATATTTCTTACTAAG AATAACGACTTACCACACTC
Downstream 100 bases:
>100_bases GATACTGCGCGAAAACAGAAAAATCTAAATATAGGAAATAGTGTAATGAAAACTGCTCATGAAATCCGTCCTGGTAACGT GATCATGTTAGATGGCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTNTPRSTHWDIFCTVVDNYGDIGVTWRLAKQMANEYHIPVNLWVDDLASFSHILPTLDPLKTAQSFNGVNIIHWTKPLP VAFIAGAVLIEAFACELPEQVKAQLVYLHQNDPESVPIWLNLEYLSAEDWVEGCHGLPSLQANGLKKYFYFPGFGAKTGG LICEQDLFAERDAWQANSANKLQLFSQLGLRGIEAKDTVISIFSYETEALPALCELWQQSAEKIHALIPKGRSLNSLTHL LPCDIAALVPGQQINHGNLTLHILPMTDQQGFDRLLWSCDFNIVRGEDSFLRAQWAAKPFIWHIYPQEDDYHLVKLEAFL KLYCDNLPPKIACYWSELNLAFNQAQQSAVSLHWQNLNPVNLPLLHHAKQWPINALNAADLATRLVQFVKNS
Sequences:
>Translated_392_residues MTNTPRSTHWDIFCTVVDNYGDIGVTWRLAKQMANEYHIPVNLWVDDLASFSHILPTLDPLKTAQSFNGVNIIHWTKPLP VAFIAGAVLIEAFACELPEQVKAQLVYLHQNDPESVPIWLNLEYLSAEDWVEGCHGLPSLQANGLKKYFYFPGFGAKTGG LICEQDLFAERDAWQANSANKLQLFSQLGLRGIEAKDTVISIFSYETEALPALCELWQQSAEKIHALIPKGRSLNSLTHL LPCDIAALVPGQQINHGNLTLHILPMTDQQGFDRLLWSCDFNIVRGEDSFLRAQWAAKPFIWHIYPQEDDYHLVKLEAFL KLYCDNLPPKIACYWSELNLAFNQAQQSAVSLHWQNLNPVNLPLLHHAKQWPINALNAADLATRLVQFVKNS >Mature_391_residues TNTPRSTHWDIFCTVVDNYGDIGVTWRLAKQMANEYHIPVNLWVDDLASFSHILPTLDPLKTAQSFNGVNIIHWTKPLPV AFIAGAVLIEAFACELPEQVKAQLVYLHQNDPESVPIWLNLEYLSAEDWVEGCHGLPSLQANGLKKYFYFPGFGAKTGGL ICEQDLFAERDAWQANSANKLQLFSQLGLRGIEAKDTVISIFSYETEALPALCELWQQSAEKIHALIPKGRSLNSLTHLL PCDIAALVPGQQINHGNLTLHILPMTDQQGFDRLLWSCDFNIVRGEDSFLRAQWAAKPFIWHIYPQEDDYHLVKLEAFLK LYCDNLPPKIACYWSELNLAFNQAQQSAVSLHWQNLNPVNLPLLHHAKQWPINALNAADLATRLVQFVKNS
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44333; Mature: 44202
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTPRSTHWDIFCTVVDNYGDIGVTWRLAKQMANEYHIPVNLWVDDLASFSHILPTLDP CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCH LKTAQSFNGVNIIHWTKPLPVAFIAGAVLIEAFACELPEQVKAQLVYLHQNDPESVPIWL HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCCEEEEE NLEYLSAEDWVEGCHGLPSLQANGLKKYFYFPGFGAKTGGLICEQDLFAERDAWQANSAN EEEEECHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEECHHHHCCCCCCCCCCCH KLQLFSQLGLRGIEAKDTVISIFSYETEALPALCELWQQSAEKIHALIPKGRSLNSLTHL HHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LPCDIAALVPGQQINHGNLTLHILPMTDQQGFDRLLWSCDFNIVRGEDSFLRAQWAAKPF HCCCHHHHCCCCEECCCCEEEEEEECCCCCCHHHHHHHCCCEEEECCCHHHHHHHCCCCE IWHIYPQEDDYHLVKLEAFLKLYCDNLPPKIACYWSELNLAFNQAQQSAVSLHWQNLNPV EEEEECCCCCEEEEHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHEEEEECCCCCC NLPLLHHAKQWPINALNAADLATRLVQFVKNS CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TNTPRSTHWDIFCTVVDNYGDIGVTWRLAKQMANEYHIPVNLWVDDLASFSHILPTLDP CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCH LKTAQSFNGVNIIHWTKPLPVAFIAGAVLIEAFACELPEQVKAQLVYLHQNDPESVPIWL HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCCEEEEE NLEYLSAEDWVEGCHGLPSLQANGLKKYFYFPGFGAKTGGLICEQDLFAERDAWQANSAN EEEEECHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEECHHHHCCCCCCCCCCCH KLQLFSQLGLRGIEAKDTVISIFSYETEALPALCELWQQSAEKIHALIPKGRSLNSLTHL HHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LPCDIAALVPGQQINHGNLTLHILPMTDQQGFDRLLWSCDFNIVRGEDSFLRAQWAAKPF HCCCHHHHCCCCEECCCCEEEEEEECCCCCCHHHHHHHCCCEEEECCCHHHHHHHCCCCE IWHIYPQEDDYHLVKLEAFLKLYCDNLPPKIACYWSELNLAFNQAQQSAVSLHWQNLNPV EEEEECCCCCEEEEHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHEEEEECCCCCC NLPLLHHAKQWPINALNAADLATRLVQFVKNS CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA