| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875300
Identifier: 160875300
GI number: 160875300
Start: 2600069
End: 2601451
Strand: Direct
Name: 160875300
Synonym: Sbal195_2187
Alternate gene names: NA
Gene position: 2600069-2601451 (Clockwise)
Preceding gene: 160875295
Following gene: 160875301
Centisome position: 48.62
GC content: 48.73
Gene sequence:
>1383_bases ATGTCTGAACCGACAGCGTTAAGTCTCATCCCACCTTTGGTGGTATTGGTGTTAGCTATTTGGTTACGCCGTCCCATTTT ATCTCTGATCATAGGTGCGGTAACCGGTTTCCTGTTACTCGATCCCAGTCAAGTCTTAAACAATTTTGCCAGTGTGTCAT TGAAGGTCATGGCCGATGAAACCATAGGTTGGTTGATTCTGGTTTGTGGTGGTTTTGGTGCGCTGATTGCGCTTTTGGTC CGCACCGGCGGCGCATTAGCGTTTGGTCGTAATGCACTGAGATTTGCTAAGGGACCTAAATCTTCCCTGTTGATGACGTT TATTCTTGGGATCGTGATTTTTATTGATGATTATCTCAATGCGTTGACCGTGGGTGAAACCATGAAGCGTGTAACGGATA AATTTAAAGTGTCCCGTGAGATGCTCGCCTATGTCGTGGATTCCACTGCCGCGCCCGTGTGCGTGTTAGTGCCATTATCG ACCTGGGCAGTATTCTTTGGTGGGTTATTGGTCGATAACGGCGTTGCGGCCGAAGGTCAGGGCATTGCTGTCTACATGCA AGCGATTCCTTACATGCTTTACGCTTGGTTAGCCGTGGCTATGGTGCTACTTGTGGTACTTGGCATAGTGCCTGCCATTG GTCCGATGAAAACTGCGCAGCTGCGCGCCGCCCAAGGCGAGCCAGCAGAAGCCCAGGTGGATTTCGACCAAGTGCAAACC TCGGATGAATATGCGGTTAAAGCTATCGAAGAGGAATTTAAGCACGCCGATAATCATGGCAAACTGCATAACTTTTTAGT GCCGATTGGTTTGTTAGTGGCTTTTACCGTGTACTTTGATATCGACGTGTGGAAAGGCTTGCTGGCGACTTTAGTCATCA CTATCCCTTATTATGCTGTGCAGCGTTTGATGCCGTTATCCGAGATGATGGACCAGATGATTGATGGCTTTAAGAGCATG TTACCGGCGATTAGCACTGTGATTGCGGCGTTTGTGTTTAAGGACGTATGCGATCAGTTATTACTGCCGCAGTACGTGAT TGAATCCTTAAGCCCGTTTATGACGCCTAAATTGCTGCCTGCTGTGGTGTTTTTATCCATGGCGATCCTCGCGTTTGCGA CGGGTTCGAGTTGGGGCATTTTTGCGGTGACCATTCCTATCGTTATGCCATTAGCGCAATCGGTGGGCGCGGATATCCCA TTAGTGATTGGTGCCTTGTTGTCGGCATCATCATTTGGTAGCCAAGCGTGCTTCTACTCAGATTCAACCGTATTGGCCGC CCAAGGCTCTGGTTGTAACTTAGTGAGCCATGCAGTGACTCAGTTACCTTATGCGCTGATCGCCGCTGTACTGGCGTTTA TCGGCTTTATAGTGATTGCGTAA
Upstream 100 bases:
>100_bases ATCATGAAGCAGCTGTGTTGACGTTCTGAATCATGTTGATTTCAGACGTTATTCTAAAACCATTTGCCTTTTAGGCGATT TATTTAGAGGACCTAAGTGC
Downstream 100 bases:
>100_bases ACTAAGTCACTATAGAATTAGTCACTGTTAGAATAAGAAACCAGCTGCGGCTGGTTTTTTTATATCTGCCGTCATTGGGT TCAGCGATCAAAATGGGGAA
Product: Na+/H+ antiporter NhaC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MSEPTALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLLLDPSQVLNNFASVSLKVMADETIGWLILVCGGFGALIALLV RTGGALAFGRNALRFAKGPKSSLLMTFILGIVIFIDDYLNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLS TWAVFFGGLLVDNGVAAEGQGIAVYMQAIPYMLYAWLAVAMVLLVVLGIVPAIGPMKTAQLRAAQGEPAEAQVDFDQVQT SDEYAVKAIEEEFKHADNHGKLHNFLVPIGLLVAFTVYFDIDVWKGLLATLVITIPYYAVQRLMPLSEMMDQMIDGFKSM LPAISTVIAAFVFKDVCDQLLLPQYVIESLSPFMTPKLLPAVVFLSMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIP LVIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQLPYALIAAVLAFIGFIVIA
Sequences:
>Translated_460_residues MSEPTALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLLLDPSQVLNNFASVSLKVMADETIGWLILVCGGFGALIALLV RTGGALAFGRNALRFAKGPKSSLLMTFILGIVIFIDDYLNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLS TWAVFFGGLLVDNGVAAEGQGIAVYMQAIPYMLYAWLAVAMVLLVVLGIVPAIGPMKTAQLRAAQGEPAEAQVDFDQVQT SDEYAVKAIEEEFKHADNHGKLHNFLVPIGLLVAFTVYFDIDVWKGLLATLVITIPYYAVQRLMPLSEMMDQMIDGFKSM LPAISTVIAAFVFKDVCDQLLLPQYVIESLSPFMTPKLLPAVVFLSMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIP LVIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQLPYALIAAVLAFIGFIVIA >Mature_459_residues SEPTALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLLLDPSQVLNNFASVSLKVMADETIGWLILVCGGFGALIALLVR TGGALAFGRNALRFAKGPKSSLLMTFILGIVIFIDDYLNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLST WAVFFGGLLVDNGVAAEGQGIAVYMQAIPYMLYAWLAVAMVLLVVLGIVPAIGPMKTAQLRAAQGEPAEAQVDFDQVQTS DEYAVKAIEEEFKHADNHGKLHNFLVPIGLLVAFTVYFDIDVWKGLLATLVITIPYYAVQRLMPLSEMMDQMIDGFKSML PAISTVIAAFVFKDVCDQLLLPQYVIESLSPFMTPKLLPAVVFLSMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIPL VIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQLPYALIAAVLAFIGFIVIA
Specific function: Unknown
COG id: COG1757
COG function: function code C; Na+/H+ antiporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018461 [H]
Pfam domain/function: PF03553 Na_H_antiporter [H]
EC number: NA
Molecular weight: Translated: 49174; Mature: 49043
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPTALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLLLDPSQVLNNFASVSLKVMADE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECC TIGWLILVCGGFGALIALLVRTGGALAFGRNALRFAKGPKSSLLMTFILGIVIFIDDYLN HHHHHHHHHCCHHHHHHHHHHCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLSTWAVFFGGLLVDNGVAAEGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCC GIAVYMQAIPYMLYAWLAVAMVLLVVLGIVPAIGPMKTAQLRAAQGEPAEAQVDFDQVQT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHCC SDEYAVKAIEEEFKHADNHGKLHNFLVPIGLLVAFTVYFDIDVWKGLLATLVITIPYYAV CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLMPLSEMMDQMIDGFKSMLPAISTVIAAFVFKDVCDQLLLPQYVIESLSPFMTPKLLP HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHH AVVFLSMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIPLVIGALLSASSFGSQACFYS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEC DSTVLAAQGSGCNLVSHAVTQLPYALIAAVLAFIGFIVIA CCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEPTALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLLLDPSQVLNNFASVSLKVMADE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECC TIGWLILVCGGFGALIALLVRTGGALAFGRNALRFAKGPKSSLLMTFILGIVIFIDDYLN HHHHHHHHHCCHHHHHHHHHHCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLSTWAVFFGGLLVDNGVAAEGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCC GIAVYMQAIPYMLYAWLAVAMVLLVVLGIVPAIGPMKTAQLRAAQGEPAEAQVDFDQVQT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHCC SDEYAVKAIEEEFKHADNHGKLHNFLVPIGLLVAFTVYFDIDVWKGLLATLVITIPYYAV CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLMPLSEMMDQMIDGFKSMLPAISTVIAAFVFKDVCDQLLLPQYVIESLSPFMTPKLLP HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHH AVVFLSMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIPLVIGALLSASSFGSQACFYS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEC DSTVLAAQGSGCNLVSHAVTQLPYALIAAVLAFIGFIVIA CCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]