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The map label for this gene is 160875273

Identifier: 160875273

GI number: 160875273

Start: 2567583

End: 2568179

Strand: Reverse

Name: 160875273

Synonym: Sbal195_2160

Alternate gene names: NA

Gene position: 2568179-2567583 (Counterclockwise)

Preceding gene: 160875274

Following gene: 160875252

Centisome position: 48.03

GC content: 49.92

Gene sequence:

>597_bases
ATGACACGCAGTCCCTATTGGGTCGCGCTGGTGGTGAGTCTGATATGTGCGGGTTTGTATGTCGCAGGCTTAGCCAGTCC
TGCTGTCGACAACCTACTCGCCTATCGCCGCAGTGCAATTAGTGAGGGTGAATTGTGGCGCTTAATCAGCGGTAATTTAC
TTCACACGAATCAGTGGCACCTATTGATGAATCTTGCGGGTCTGTGGGTTGTGCTGTTTTTGCATCATTTCCACTACCAT
CTCAAAAGCTTAAGCGCACTATTCCTGGTATTATGCTTACTCGAAGGCATAGGCTTATATTTGGGCTATCCGCAATTGCT
CGGTTATGTCGGCTTAAGCGGCATGTTGCACGGCCTATTCGCCTACGGCGCGGTGCAGGATATTATCCGCAAGCTACGTT
CAGGCTATCTGCTGTTACTTGGTGTTATCATTAAAGTCGGCCACGAACAGCTTTATGGCGCCAGCAATGATGTCACCGCC
ATGATAGGCGCGCGTGTGGCAACCGAGGCGCATTTAGTTGGCTTAATCTGTGGGCTGATTTGTGCTTTAGCGGTATTCAT
CACGTTGAAGTTTCACCACGTAAAATCCGCCGCTTAG

Upstream 100 bases:

>100_bases
GCGATTGCCCGGCTTGTCATCTGCGTAAACGGGGTTTGGACGACTATCTGCAAGATAAAACCGCAATCATGGCTTCACTC
GACGCTAGCGAGCCTAATGC

Downstream 100 bases:

>100_bases
TTCACCTGCACAGATTAAAAAGCCGTCGCAGCATAATTGCTGGACGGCTTTTTTAATCTTTAGCGTTAAGGTAAATCTAG
GCCTTGATCAACAAGTCCCG

Product: rhomboid family protein

Products: NA

Alternate protein names: Integral Membrane Protein; Rhomboid Family Membrane Protein; Rhomboid-Like Protein; Peptidase; Rhomboid Family Integral Membrane Protein

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTRSPYWVALVVSLICAGLYVAGLASPAVDNLLAYRRSAISEGELWRLISGNLLHTNQWHLLMNLAGLWVVLFLHHFHYH
LKSLSALFLVLCLLEGIGLYLGYPQLLGYVGLSGMLHGLFAYGAVQDIIRKLRSGYLLLLGVIIKVGHEQLYGASNDVTA
MIGARVATEAHLVGLICGLICALAVFITLKFHHVKSAA

Sequences:

>Translated_198_residues
MTRSPYWVALVVSLICAGLYVAGLASPAVDNLLAYRRSAISEGELWRLISGNLLHTNQWHLLMNLAGLWVVLFLHHFHYH
LKSLSALFLVLCLLEGIGLYLGYPQLLGYVGLSGMLHGLFAYGAVQDIIRKLRSGYLLLLGVIIKVGHEQLYGASNDVTA
MIGARVATEAHLVGLICGLICALAVFITLKFHHVKSAA
>Mature_197_residues
TRSPYWVALVVSLICAGLYVAGLASPAVDNLLAYRRSAISEGELWRLISGNLLHTNQWHLLMNLAGLWVVLFLHHFHYHL
KSLSALFLVLCLLEGIGLYLGYPQLLGYVGLSGMLHGLFAYGAVQDIIRKLRSGYLLLLGVIIKVGHEQLYGASNDVTAM
IGARVATEAHLVGLICGLICALAVFITLKFHHVKSAA

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21619; Mature: 21488

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSPYWVALVVSLICAGLYVAGLASPAVDNLLAYRRSAISEGELWRLISGNLLHTNQWH
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCHHH
LLMNLAGLWVVLFLHHFHYHLKSLSALFLVLCLLEGIGLYLGYPQLLGYVGLSGMLHGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AYGAVQDIIRKLRSGYLLLLGVIIKVGHEQLYGASNDVTAMIGARVATEAHLVGLICGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CALAVFITLKFHHVKSAA
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRSPYWVALVVSLICAGLYVAGLASPAVDNLLAYRRSAISEGELWRLISGNLLHTNQWH
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCHHH
LLMNLAGLWVVLFLHHFHYHLKSLSALFLVLCLLEGIGLYLGYPQLLGYVGLSGMLHGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AYGAVQDIIRKLRSGYLLLLGVIIKVGHEQLYGASNDVTAMIGARVATEAHLVGLICGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CALAVFITLKFHHVKSAA
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA