| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875268
Identifier: 160875268
GI number: 160875268
Start: 2560761
End: 2561669
Strand: Direct
Name: 160875268
Synonym: Sbal195_2155
Alternate gene names: NA
Gene position: 2560761-2561669 (Clockwise)
Preceding gene: 160875267
Following gene: 160875269
Centisome position: 47.89
GC content: 43.45
Gene sequence:
>909_bases ATGATTATCGACCCTAAAACTGGCAAGCAAATTTTCAATGACATTGTTGAAATCACACCATTACACGCTAATGCAATGCT CGCATACAGTGCATGGGCTACTGAGCTTGGCCTCAGTGATACTGCCACTTTACCCGGCTTGGTTCAGGCTGATGATGCTG CAACGGAAATAGATATAGGGTTTCCAACAGCAATAGATGGCTCAACATCTAAAATAATGCAATCAACTGAGGGATCAATC GGTATTTATGTTGACGAACCACCGGGCTCTGTCTCATCGTCTGGTCGTGCTATAACAGCCGTTGCACCCAGTCAAGTCAG TGTACCTCGTGCCTACACATCACGCGCTACGATCAACCCTTCATTTGTTATTAACTGTAAGAGCCCCAATGTTGATAGTA AATCGTACAATGCCAAGTGGTATAAAACGGCAGATGCTGCAATTCTATTTATCAGTTGGTCGCAATACGGTAACAGTAAT TTAAATAAGACCGACCTCGCGATCAAATTTTCGAGAGGTAATATTGAACTGGTTTGCACTGCAGGTACTGATGCAGGCAG TTATCTTCAGTTTTTTATCATGGACTCGACCTCTGCATCTGGCCAAGCATTAGTCGGAAATGGCAATTTTGGCAAACAGC TAACACCATCCAACACGTACCAATTCAGGGCTGTGTCACTAAAGAAAATATCTGGTCAAGTGATTGGTGAGAATGGTACC GGTATCATCACCGATATTAGAGCATATCTCCGCAGTAGTGGTTTGCTCGTTGGTTCAACTACTTCTGATAGTTCGGGTGA CTACCTCATTGAAACTGCATATCCAGATGAACATTATGTGGTTTGTTTGGCTGAGGATAGTTCCACACTTAATGCCCTAG TGTTTGACAGGGTGATCCCAATTGATTGA
Upstream 100 bases:
>100_bases GGGAAGGTACAACGTTCCACTTGTCTCAGCAAATTGATGATTTGGTATACAGTGCAACAGGTACGTTTACGTTATTAAGT GCAGACACTAGGGTGTCACT
Downstream 100 bases:
>100_bases TTTCAAGTTTCCTCAAGGGGCTTATTTTCCGCCAAACGGTGAAGCTGTAGATTTTCAATTTTCTGCAGATCGAGTCATTG CAGTTACGTCTAATTTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MIIDPKTGKQIFNDIVEITPLHANAMLAYSAWATELGLSDTATLPGLVQADDAATEIDIGFPTAIDGSTSKIMQSTEGSI GIYVDEPPGSVSSSGRAITAVAPSQVSVPRAYTSRATINPSFVINCKSPNVDSKSYNAKWYKTADAAILFISWSQYGNSN LNKTDLAIKFSRGNIELVCTAGTDAGSYLQFFIMDSTSASGQALVGNGNFGKQLTPSNTYQFRAVSLKKISGQVIGENGT GIITDIRAYLRSSGLLVGSTTSDSSGDYLIETAYPDEHYVVCLAEDSSTLNALVFDRVIPID
Sequences:
>Translated_302_residues MIIDPKTGKQIFNDIVEITPLHANAMLAYSAWATELGLSDTATLPGLVQADDAATEIDIGFPTAIDGSTSKIMQSTEGSI GIYVDEPPGSVSSSGRAITAVAPSQVSVPRAYTSRATINPSFVINCKSPNVDSKSYNAKWYKTADAAILFISWSQYGNSN LNKTDLAIKFSRGNIELVCTAGTDAGSYLQFFIMDSTSASGQALVGNGNFGKQLTPSNTYQFRAVSLKKISGQVIGENGT GIITDIRAYLRSSGLLVGSTTSDSSGDYLIETAYPDEHYVVCLAEDSSTLNALVFDRVIPID >Mature_302_residues MIIDPKTGKQIFNDIVEITPLHANAMLAYSAWATELGLSDTATLPGLVQADDAATEIDIGFPTAIDGSTSKIMQSTEGSI GIYVDEPPGSVSSSGRAITAVAPSQVSVPRAYTSRATINPSFVINCKSPNVDSKSYNAKWYKTADAAILFISWSQYGNSN LNKTDLAIKFSRGNIELVCTAGTDAGSYLQFFIMDSTSASGQALVGNGNFGKQLTPSNTYQFRAVSLKKISGQVIGENGT GIITDIRAYLRSSGLLVGSTTSDSSGDYLIETAYPDEHYVVCLAEDSSTLNALVFDRVIPID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32060; Mature: 32060
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDPKTGKQIFNDIVEITPLHANAMLAYSAWATELGLSDTATLPGLVQADDAATEIDIG CEECCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCCCCCEEECCCCCEEEECC FPTAIDGSTSKIMQSTEGSIGIYVDEPPGSVSSSGRAITAVAPSQVSVPRAYTSRATINP CCCEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHCCCEECCC SFVINCKSPNVDSKSYNAKWYKTADAAILFISWSQYGNSNLNKTDLAIKFSRGNIELVCT CEEEEECCCCCCCCCCCCEEEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEE AGTDAGSYLQFFIMDSTSASGQALVGNGNFGKQLTPSNTYQFRAVSLKKISGQVIGENGT CCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCC GIITDIRAYLRSSGLLVGSTTSDSSGDYLIETAYPDEHYVVCLAEDSSTLNALVFDRVIP EEHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEEEC ID CC >Mature Secondary Structure MIIDPKTGKQIFNDIVEITPLHANAMLAYSAWATELGLSDTATLPGLVQADDAATEIDIG CEECCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCCCCCEEECCCCCEEEECC FPTAIDGSTSKIMQSTEGSIGIYVDEPPGSVSSSGRAITAVAPSQVSVPRAYTSRATINP CCCEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHCCCEECCC SFVINCKSPNVDSKSYNAKWYKTADAAILFISWSQYGNSNLNKTDLAIKFSRGNIELVCT CEEEEECCCCCCCCCCCCEEEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEE AGTDAGSYLQFFIMDSTSASGQALVGNGNFGKQLTPSNTYQFRAVSLKKISGQVIGENGT CCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCC GIITDIRAYLRSSGLLVGSTTSDSSGDYLIETAYPDEHYVVCLAEDSSTLNALVFDRVIP EEHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEEEC ID CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA