| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875250
Identifier: 160875250
GI number: 160875250
Start: 2542652
End: 2543971
Strand: Direct
Name: 160875250
Synonym: Sbal195_2137
Alternate gene names: NA
Gene position: 2542652-2543971 (Clockwise)
Preceding gene: 160875249
Following gene: 160875251
Centisome position: 47.55
GC content: 53.94
Gene sequence:
>1320_bases ATGCCTAAACCAAGAGTGCCTAAAACCGTTGATTTAAGCATTGCCATTAACCAAGCCCCCGCCGATGCGGTGGCCTATTT CCGTGCCAAAGGCTTTGCTATAAGTGACGATTGGCAAGACGTGTGGACCCGCGCCCACGCCCGTGCGTTTACTGTGGCCA AGGCGGCACAGATGGATGTGCTCACGGCGATCCGTAATCAAGTGGATGCAGCCCTAAGCCAAGGGTTAACCGCTAAGCAG TTTCAGGCAAACCTTAAGCCTCAACTCGAAAAGCTCGGATGGTGGGGTAAAAAGGAAGTCGATGGCCGCGAGGTACAGCT GGGGAGTCCCTACCGCTTAAACACTATCTATCGTCAAAACCTGCAAACCGCTTACATGGCTGGGCGCTATCGGCGCATGT TATCGCGCACCAAAACCCATCCCTATTGGCAGTATGTGGCGATAGATGACGGCCAAACACGGCCAGCCCATGCGCGGCTT AGGGGTAAAGTGTTCCGCTTTGACGATCCAATATGGGACATCATTTATCCTCCCAATGGCTGGGGCTGTCGTTGCCGCGT TCGGGCGCTCACCGAGGCGCAAGTGAAGGCGATGGGGATCACTGTGGAAAATGGCGAAGGTTATATCCAGCGCTTTGACA CTGAGACAGTCGCGCGCGGAACGGGTGAAGTGTTAACCGTGCCCCATGCGCGTATCGATCTGCCCGATGGCAGCAGCATG AGCCCCGATTTAGGCTGGGCCTATAGTCCAGGCGAAGCCGCCTTTGGTACCGACGTGGCCGTCGCTAAAAAGCTGGGCAC TATTCAATCCCTCGATACCCGCGCGCAGTTTATTCAGGCACTCAATAATAGCCCACTGCGCCACGCCCAGTTTGCCCAAT GGACCGATGAAGTCCTTGCCGCCAATCCAGGGCAGAAACGAAGACCAGGCTTAGGCGTACAGGCTTTAGGTTTTATGACG CCATCAATTCAAGCTTCGGTAACGGCGCGTTTAGGCCGCGAGCCTAGCGCATTGCTGGCTATAACTGAGCGGCAACTCAG CACAGCGCAAGCCTCGGTGACGCCTAACAAGTTACAACAATTACCGCTGATGCTGGCTAAGCCCGAGGCCGTTCTATGGG ATAGCGATAATCAAACCTTGCTTTATGTCTATTCGACGGAATGGCAAGCGGATGATGAACGAGCTAGCAAATTACTTATC GCGAGCCATTGGTCATTACAGCGCACACCTAATGAAGGGCAAGTGGAAGGGTTTAAGTTATCGCTAGCAGAATTACAGCA AGCCCAATACCAAGTGCTTGAAGGCCAGTTAAAAGGGTAG
Upstream 100 bases:
>100_bases CGGGCGCAACTGGAAAAGGACTATCCCGCCATGGATACCGAGCAGCTTACCGAAACCTTAGCGCGGTTAATGTTTGTGGC CGAACTGTGGGGCATGGCCA
Downstream 100 bases:
>100_bases GTATGCACTATGAGTAAAGTGGATATTCAGTTTACCAGTGGCACCGTATTGCAGGTGCTTGATAGCTTGCTGGATAAGCT CGACGACTTAAGTGAGCCAA
Product: SPP1 family phage head morphogenesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MPKPRVPKTVDLSIAINQAPADAVAYFRAKGFAISDDWQDVWTRAHARAFTVAKAAQMDVLTAIRNQVDAALSQGLTAKQ FQANLKPQLEKLGWWGKKEVDGREVQLGSPYRLNTIYRQNLQTAYMAGRYRRMLSRTKTHPYWQYVAIDDGQTRPAHARL RGKVFRFDDPIWDIIYPPNGWGCRCRVRALTEAQVKAMGITVENGEGYIQRFDTETVARGTGEVLTVPHARIDLPDGSSM SPDLGWAYSPGEAAFGTDVAVAKKLGTIQSLDTRAQFIQALNNSPLRHAQFAQWTDEVLAANPGQKRRPGLGVQALGFMT PSIQASVTARLGREPSALLAITERQLSTAQASVTPNKLQQLPLMLAKPEAVLWDSDNQTLLYVYSTEWQADDERASKLLI ASHWSLQRTPNEGQVEGFKLSLAELQQAQYQVLEGQLKG
Sequences:
>Translated_439_residues MPKPRVPKTVDLSIAINQAPADAVAYFRAKGFAISDDWQDVWTRAHARAFTVAKAAQMDVLTAIRNQVDAALSQGLTAKQ FQANLKPQLEKLGWWGKKEVDGREVQLGSPYRLNTIYRQNLQTAYMAGRYRRMLSRTKTHPYWQYVAIDDGQTRPAHARL RGKVFRFDDPIWDIIYPPNGWGCRCRVRALTEAQVKAMGITVENGEGYIQRFDTETVARGTGEVLTVPHARIDLPDGSSM SPDLGWAYSPGEAAFGTDVAVAKKLGTIQSLDTRAQFIQALNNSPLRHAQFAQWTDEVLAANPGQKRRPGLGVQALGFMT PSIQASVTARLGREPSALLAITERQLSTAQASVTPNKLQQLPLMLAKPEAVLWDSDNQTLLYVYSTEWQADDERASKLLI ASHWSLQRTPNEGQVEGFKLSLAELQQAQYQVLEGQLKG >Mature_438_residues PKPRVPKTVDLSIAINQAPADAVAYFRAKGFAISDDWQDVWTRAHARAFTVAKAAQMDVLTAIRNQVDAALSQGLTAKQF QANLKPQLEKLGWWGKKEVDGREVQLGSPYRLNTIYRQNLQTAYMAGRYRRMLSRTKTHPYWQYVAIDDGQTRPAHARLR GKVFRFDDPIWDIIYPPNGWGCRCRVRALTEAQVKAMGITVENGEGYIQRFDTETVARGTGEVLTVPHARIDLPDGSSMS PDLGWAYSPGEAAFGTDVAVAKKLGTIQSLDTRAQFIQALNNSPLRHAQFAQWTDEVLAANPGQKRRPGLGVQALGFMTP SIQASVTARLGREPSALLAITERQLSTAQASVTPNKLQQLPLMLAKPEAVLWDSDNQTLLYVYSTEWQADDERASKLLIA SHWSLQRTPNEGQVEGFKLSLAELQQAQYQVLEGQLKG
Specific function: Involved in virion morphogenesis [H]
COG id: COG2369
COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein F [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006528 [H]
Pfam domain/function: PF04233 Phage_Mu_F [H]
EC number: NA
Molecular weight: Translated: 48845; Mature: 48714
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPRVPKTVDLSIAINQAPADAVAYFRAKGFAISDDWQDVWTRAHARAFTVAKAAQMDV CCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH LTAIRNQVDAALSQGLTAKQFQANLKPQLEKLGWWGKKEVDGREVQLGSPYRLNTIYRQN HHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCEEECCCCEEEHHHHHHC LQTAYMAGRYRRMLSRTKTHPYWQYVAIDDGQTRPAHARLRGKVFRFDDPIWDIIYPPNG HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCCEEEEECCCCEEEEECCCC WGCRCRVRALTEAQVKAMGITVENGEGYIQRFDTETVARGTGEVLTVPHARIDLPDGSSM CCCEEEEEEHHHCEEEEEEEEEECCCCEEEECCCHHHHCCCCCEEECCCCEEECCCCCCC SPDLGWAYSPGEAAFGTDVAVAKKLGTIQSLDTRAQFIQALNNSPLRHAQFAQWTDEVLA CCCCCEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ANPGQKRRPGLGVQALGFMTPSIQASVTARLGREPSALLAITERQLSTAQASVTPNKLQQ CCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCHHHHHH LPLMLAKPEAVLWDSDNQTLLYVYSTEWQADDERASKLLIASHWSLQRTPNEGQVEGFKL CCCEEECCCEEEECCCCCEEEEEEECCCCCCHHHHCEEEEEECCCCCCCCCCCCCCEEEE SLAELQQAQYQVLEGQLKG EHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PKPRVPKTVDLSIAINQAPADAVAYFRAKGFAISDDWQDVWTRAHARAFTVAKAAQMDV CCCCCCCEEEEEEEEECCCCHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH LTAIRNQVDAALSQGLTAKQFQANLKPQLEKLGWWGKKEVDGREVQLGSPYRLNTIYRQN HHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCEEECCCCEEEHHHHHHC LQTAYMAGRYRRMLSRTKTHPYWQYVAIDDGQTRPAHARLRGKVFRFDDPIWDIIYPPNG HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCCEEEEECCCCEEEEECCCC WGCRCRVRALTEAQVKAMGITVENGEGYIQRFDTETVARGTGEVLTVPHARIDLPDGSSM CCCEEEEEEHHHCEEEEEEEEEECCCCEEEECCCHHHHCCCCCEEECCCCEEECCCCCCC SPDLGWAYSPGEAAFGTDVAVAKKLGTIQSLDTRAQFIQALNNSPLRHAQFAQWTDEVLA CCCCCEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ANPGQKRRPGLGVQALGFMTPSIQASVTARLGREPSALLAITERQLSTAQASVTPNKLQQ CCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCHHHHHH LPLMLAKPEAVLWDSDNQTLLYVYSTEWQADDERASKLLIASHWSLQRTPNEGQVEGFKL CCCEEECCCEEEECCCCCEEEEEEECCCCCCHHHHCEEEEEECCCCCCCCCCCCCCEEEE SLAELQQAQYQVLEGQLKG EHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]