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The map label for this gene is rnfC [H]

Identifier: 160875223

GI number: 160875223

Start: 2518747

End: 2521413

Strand: Reverse

Name: rnfC [H]

Synonym: Sbal195_2110

Alternate gene names: 160875223

Gene position: 2521413-2518747 (Counterclockwise)

Preceding gene: 160875224

Following gene: 160875222

Centisome position: 47.15

GC content: 50.36

Gene sequence:

>2667_bases
GTGTTAACTTTATTAGATCAATTAGATAAAGGAACCCTTTGGCGCTCACCCGGTGGAATACATCCTCCTGAAGTCAAATT
CCTCTCCAACGCGACGCCTATTGGCAAAATGCCATTAGCCTCGACGTACTTAGTGCCCGTCCCTCAAGTCGGTGAAAACT
GTACGCTTGCGGTGAAGGTTGGCGATAGCGTCTTAAAAGGCACGCCGTTAACGCAAGGTACCTCGATTTGGCATTTACCT
GTGCATGCGCCAACATCGGGCACTATTGTTGCTATCGAACCAAGGGCGAGCAACCATGCCTCTGCATTGCCGGTTAACAC
TTGCGTTATTGCAGCCGATGGCAAAGACACCTGGTGCGAGTTGGTACAACATCAACTTGATGACTTAAGCAATCAGCAAA
TCGTCGATAAGGTTCGCTCAGCCGGCATTGCGGGTATGGGCGGCGCAGCGTTTCCGACTCATATTAAGCTTAATCCGGTC
AGTGAAATCGATTTAGTCATCATCAACGGCGTCGAGTGCGAACCTTATATCAGCGCCGATGACAGATTAATGCGTGAATA
CAGCCAAGATATCCTCGCAGGTATTGGCATAATTCATCGGCTATTAACGCCAAAACGCATTGTTATCGCCATTGAAGACA
ATAAACCTGAAGCGGCCAAAGCCATGCAAGCTGCTGTCAGCCAATGCGGACTCCCAGCGGGCAGCATTCGGGTGACAGTT
ATCCCGACAAAATACCCTTCTGGCGGTGAAAAGCAGTTAATTCAAATCATTACTGGCCGCGAAGTGCCCTCGGGCGCCAT
TCCCGCCAAACTCGGTATCGTGGTACATAACGTCGGTACTGCCTATGCAATTAATCAAGCCGTCACTCAAGGCAAGCCTT
TGGTTGAACGCGTTGTGACTGTGACAGGCACAAATGTCGGCAAACCAGGGAACTACTGGTTACCGATAGGCACGCCCGTT
GATCACGTTCTGACTGCAACTGAATTCACGCCAGAGCCTGACCAAAAGGTGATTATTGGCGGGCCTATGATGGGCCATGC
GTTAGCGAATATCCAAGTGCCTATTTTAAAAGGTACCAACTGTATTCTGGTGCCAAGCAGCCAAGAAATTGGTAGCACGC
CCGAAGAAAAAGCCTGTATCCGCTGCGGCGAATGCGCCACTGCCTGCCCTGCACTCTTGTTGCCACAACAACTCTTTTGG
CACGCCAAGGCCGAAGAATACGATAAAGCCGCCAGTTACAATCTAAAGGATTGTATTGAATGCGGTTGTTGTAGTTACGT
TTGCCCGAGTGATATTCCATTAGTCGAGTATTACCGCATTGCCAAATCTGCACTCAAACAAGCCGCCGATGAGAAGCAGC
AAGCAGAGCGCGCCAAACAGCGCTTCGATGCCCGCTTAGCGCGTCTTGAAGAAGAAAAACTGGCCCGTGAAGCTAAGGCG
AAAGAGGCGTCTGAACGCCGACAAGCCAGCATGACAGGTACAGATAAAAATGCCGTCGCCGAGGCCATGGCGCGTATCGC
GGCGAAAAAAGCTGCTGCGGCACAAGCTGTCACTGGTGAATCAATTACCGAAGAGTCAAGCGTCACAACAACTGGCTCCA
CGGAAGTGCCAAAAGGTAAGGCCGCCGTTGCCGCCGCCATCGCCCGTGCTAAGGCGAAAAAAGCTGCTCAAGCAAATGCT
GATGGTACTGACACCAATGGTGCTGAAACTGACAGTACTAAAACAGACAATGCGGTGAATGTTGATGCAAACGACTCCAT
CTCAGCAACAGATGTGATAGCGCAGGAAGCGCCGTTATCCCAAAAAGACAAAGTCGCTGCGGCGATTGCGCGCGCCAAGG
CCAAAAAAGCCGCACAGCAAACCGATACTGCACCGCTTGAATCTACTGAAACCGCTGATAACACACCAGCACTCAGCGCT
GACAATGATAAAAAGGCGAAAGTAGCAGCAGCCGTTGCTCGTGCCAAGGCCAAGAAAGCGGCGCAGCAAGTAGAAACCGC
CGCTAGCGATACTGAAGTTAGCAATACTGACGTTAGCGTTAGTGATGTTAGCGTTAGTGACGTTAATGATGCTGAAGCGA
TTAAAAAAGCCAAAGTGGCCGCCGCAGTTGCTCGCGCTAAAGCGAAAAAAGCCGCCCAACAAGCTGAGACAAATGCTGAA
AATGGTTTAAACCAGACCGCGACTCCAGCAGTTGATTCCGCAGCTAACGTTCAAGCCGTTGACTCAACTGCCAGTGCAGA
AACCGCTGTTAATGCAGTCGCTACTGATATTGAAGTTAGCATCACTGACGTTAGCATTAACGACGCTGAAGCGATTAAAA
AGGCCAAAGTGGCCGCCGCTGTTGCTCGTGCTAAAGCGAAGAAAATAGCAGCTGCATCAACAGAGTCTAAAACTGATGCT
GAAATAGAGTCCGTTGACGATATCCAAACTGAAGCTAACGTGGCATCGCCCTCGATAGCAGCAACGCTTGATACTGCAGC
AACTGAAGCTGATGCCGTTTTACCATCGGTGGGATCCACTGCAGAGCCCATTGAAACGGCGCCGTTATCCAGTGATGAAC
TTAAAAAAGCGCGAATTGCTGCGACTATCGCCAAGGCGAAAGCCAAAAAAGCGGCACTCGCCCAAGAAGCCAATGCTTCG
AGCGACTCAAGTGTAACTAATGATTAA

Upstream 100 bases:

>100_bases
ATTGGAACTGGCGCTTAAATGCTATCCCAGTGACGCTCATCCAAGAAAACAGTATTCAAGAAACCAATATTCAAGAGACA
AAGTCTGAAGAGGAAAAGCG

Downstream 100 bases:

>100_bases
GAACAGAATGATTAAAAGGGAATACAATGGCGTTTAAAATAGCCTCATCACCCCATGTAACGCGTAACTTGCATACCTCA
ACGGTCATGCAAAGGGTGAT

Product: electron transport complex protein RnfC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 888; Mature: 888

Protein sequence:

>888_residues
MLTLLDQLDKGTLWRSPGGIHPPEVKFLSNATPIGKMPLASTYLVPVPQVGENCTLAVKVGDSVLKGTPLTQGTSIWHLP
VHAPTSGTIVAIEPRASNHASALPVNTCVIAADGKDTWCELVQHQLDDLSNQQIVDKVRSAGIAGMGGAAFPTHIKLNPV
SEIDLVIINGVECEPYISADDRLMREYSQDILAGIGIIHRLLTPKRIVIAIEDNKPEAAKAMQAAVSQCGLPAGSIRVTV
IPTKYPSGGEKQLIQIITGREVPSGAIPAKLGIVVHNVGTAYAINQAVTQGKPLVERVVTVTGTNVGKPGNYWLPIGTPV
DHVLTATEFTPEPDQKVIIGGPMMGHALANIQVPILKGTNCILVPSSQEIGSTPEEKACIRCGECATACPALLLPQQLFW
HAKAEEYDKAASYNLKDCIECGCCSYVCPSDIPLVEYYRIAKSALKQAADEKQQAERAKQRFDARLARLEEEKLAREAKA
KEASERRQASMTGTDKNAVAEAMARIAAKKAAAAQAVTGESITEESSVTTTGSTEVPKGKAAVAAAIARAKAKKAAQANA
DGTDTNGAETDSTKTDNAVNVDANDSISATDVIAQEAPLSQKDKVAAAIARAKAKKAAQQTDTAPLESTETADNTPALSA
DNDKKAKVAAAVARAKAKKAAQQVETAASDTEVSNTDVSVSDVSVSDVNDAEAIKKAKVAAAVARAKAKKAAQQAETNAE
NGLNQTATPAVDSAANVQAVDSTASAETAVNAVATDIEVSITDVSINDAEAIKKAKVAAAVARAKAKKIAAASTESKTDA
EIESVDDIQTEANVASPSIAATLDTAATEADAVLPSVGSTAEPIETAPLSSDELKKARIAATIAKAKAKKAALAQEANAS
SDSSVTND

Sequences:

>Translated_888_residues
MLTLLDQLDKGTLWRSPGGIHPPEVKFLSNATPIGKMPLASTYLVPVPQVGENCTLAVKVGDSVLKGTPLTQGTSIWHLP
VHAPTSGTIVAIEPRASNHASALPVNTCVIAADGKDTWCELVQHQLDDLSNQQIVDKVRSAGIAGMGGAAFPTHIKLNPV
SEIDLVIINGVECEPYISADDRLMREYSQDILAGIGIIHRLLTPKRIVIAIEDNKPEAAKAMQAAVSQCGLPAGSIRVTV
IPTKYPSGGEKQLIQIITGREVPSGAIPAKLGIVVHNVGTAYAINQAVTQGKPLVERVVTVTGTNVGKPGNYWLPIGTPV
DHVLTATEFTPEPDQKVIIGGPMMGHALANIQVPILKGTNCILVPSSQEIGSTPEEKACIRCGECATACPALLLPQQLFW
HAKAEEYDKAASYNLKDCIECGCCSYVCPSDIPLVEYYRIAKSALKQAADEKQQAERAKQRFDARLARLEEEKLAREAKA
KEASERRQASMTGTDKNAVAEAMARIAAKKAAAAQAVTGESITEESSVTTTGSTEVPKGKAAVAAAIARAKAKKAAQANA
DGTDTNGAETDSTKTDNAVNVDANDSISATDVIAQEAPLSQKDKVAAAIARAKAKKAAQQTDTAPLESTETADNTPALSA
DNDKKAKVAAAVARAKAKKAAQQVETAASDTEVSNTDVSVSDVSVSDVNDAEAIKKAKVAAAVARAKAKKAAQQAETNAE
NGLNQTATPAVDSAANVQAVDSTASAETAVNAVATDIEVSITDVSINDAEAIKKAKVAAAVARAKAKKIAAASTESKTDA
EIESVDDIQTEANVASPSIAATLDTAATEADAVLPSVGSTAEPIETAPLSSDELKKARIAATIAKAKAKKAALAQEANAS
SDSSVTND
>Mature_888_residues
MLTLLDQLDKGTLWRSPGGIHPPEVKFLSNATPIGKMPLASTYLVPVPQVGENCTLAVKVGDSVLKGTPLTQGTSIWHLP
VHAPTSGTIVAIEPRASNHASALPVNTCVIAADGKDTWCELVQHQLDDLSNQQIVDKVRSAGIAGMGGAAFPTHIKLNPV
SEIDLVIINGVECEPYISADDRLMREYSQDILAGIGIIHRLLTPKRIVIAIEDNKPEAAKAMQAAVSQCGLPAGSIRVTV
IPTKYPSGGEKQLIQIITGREVPSGAIPAKLGIVVHNVGTAYAINQAVTQGKPLVERVVTVTGTNVGKPGNYWLPIGTPV
DHVLTATEFTPEPDQKVIIGGPMMGHALANIQVPILKGTNCILVPSSQEIGSTPEEKACIRCGECATACPALLLPQQLFW
HAKAEEYDKAASYNLKDCIECGCCSYVCPSDIPLVEYYRIAKSALKQAADEKQQAERAKQRFDARLARLEEEKLAREAKA
KEASERRQASMTGTDKNAVAEAMARIAAKKAAAAQAVTGESITEESSVTTTGSTEVPKGKAAVAAAIARAKAKKAAQANA
DGTDTNGAETDSTKTDNAVNVDANDSISATDVIAQEAPLSQKDKVAAAIARAKAKKAAQQTDTAPLESTETADNTPALSA
DNDKKAKVAAAVARAKAKKAAQQVETAASDTEVSNTDVSVSDVSVSDVNDAEAIKKAKVAAAVARAKAKKAAQQAETNAE
NGLNQTATPAVDSAANVQAVDSTASAETAVNAVATDIEVSITDVSINDAEAIKKAKVAAAVARAKAKKIAAASTESKTDA
EIESVDDIQTEANVASPSIAATLDTAATEADAVLPSVGSTAEPIETAPLSSDELKKARIAATIAKAKAKKAALAQEANAS
SDSSVTND

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4656

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfC

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787916, Length=580, Percent_Identity=45, Blast_Score=501, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR010208
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR011538
- InterPro:   IPR019554 [H]

Pfam domain/function: PF01512 Complex1_51K; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 92198; Mature: 92198

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLLDQLDKGTLWRSPGGIHPPEVKFLSNATPIGKMPLASTYLVPVPQVGENCTLAVKV
CCCHHHHCCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEE
GDSVLKGTPLTQGTSIWHLPVHAPTSGTIVAIEPRASNHASALPVNTCVIAADGKDTWCE
CCHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHH
LVQHQLDDLSNQQIVDKVRSAGIAGMGGAAFPTHIKLNPVSEIDLVIINGVECEPYISAD
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCH
DRLMREYSQDILAGIGIIHRLLTPKRIVIAIEDNKPEAAKAMQAAVSQCGLPAGSIRVTV
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEE
IPTKYPSGGEKQLIQIITGREVPSGAIPAKLGIVVHNVGTAYAINQAVTQGKPLVERVVT
EECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHH
VTGTNVGKPGNYWLPIGTPVDHVLTATEFTPEPDQKVIIGGPMMGHALANIQVPILKGTN
HCCCCCCCCCCEEEECCCCHHHHEECCCCCCCCCCEEEECCCHHHHHHHCEEEEEEECCC
CILVPSSQEIGSTPEEKACIRCGECATACPALLLPQQLFWHAKAEEYDKAASYNLKDCIE
EEEECCCHHHCCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCHHHHHH
CGCCSYVCPSDIPLVEYYRIAKSALKQAADEKQQAERAKQRFDARLARLEEEKLAREAKA
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEASERRQASMTGTDKNAVAEAMARIAAKKAAAAQAVTGESITEESSVTTTGSTEVPKGK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCH
AAVAAAIARAKAKKAAQANADGTDTNGAETDSTKTDNAVNVDANDSISATDVIAQEAPLS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCC
QKDKVAAAIARAKAKKAAQQTDTAPLESTETADNTPALSADNDKKAKVAAAVARAKAKKA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AQQVETAASDTEVSNTDVSVSDVSVSDVNDAEAIKKAKVAAAVARAKAKKAAQQAETNAE
HHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
NGLNQTATPAVDSAANVQAVDSTASAETAVNAVATDIEVSITDVSINDAEAIKKAKVAAA
CCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHH
VARAKAKKIAAASTESKTDAEIESVDDIQTEANVASPSIAATLDTAATEADAVLPSVGST
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHCCCCCCC
AEPIETAPLSSDELKKARIAATIAKAKAKKAALAQEANASSDSSVTND
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLTLLDQLDKGTLWRSPGGIHPPEVKFLSNATPIGKMPLASTYLVPVPQVGENCTLAVKV
CCCHHHHCCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEE
GDSVLKGTPLTQGTSIWHLPVHAPTSGTIVAIEPRASNHASALPVNTCVIAADGKDTWCE
CCHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHH
LVQHQLDDLSNQQIVDKVRSAGIAGMGGAAFPTHIKLNPVSEIDLVIINGVECEPYISAD
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCH
DRLMREYSQDILAGIGIIHRLLTPKRIVIAIEDNKPEAAKAMQAAVSQCGLPAGSIRVTV
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEE
IPTKYPSGGEKQLIQIITGREVPSGAIPAKLGIVVHNVGTAYAINQAVTQGKPLVERVVT
EECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHH
VTGTNVGKPGNYWLPIGTPVDHVLTATEFTPEPDQKVIIGGPMMGHALANIQVPILKGTN
HCCCCCCCCCCEEEECCCCHHHHEECCCCCCCCCCEEEECCCHHHHHHHCEEEEEEECCC
CILVPSSQEIGSTPEEKACIRCGECATACPALLLPQQLFWHAKAEEYDKAASYNLKDCIE
EEEECCCHHHCCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCHHHHHH
CGCCSYVCPSDIPLVEYYRIAKSALKQAADEKQQAERAKQRFDARLARLEEEKLAREAKA
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEASERRQASMTGTDKNAVAEAMARIAAKKAAAAQAVTGESITEESSVTTTGSTEVPKGK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCH
AAVAAAIARAKAKKAAQANADGTDTNGAETDSTKTDNAVNVDANDSISATDVIAQEAPLS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCC
QKDKVAAAIARAKAKKAAQQTDTAPLESTETADNTPALSADNDKKAKVAAAVARAKAKKA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AQQVETAASDTEVSNTDVSVSDVSVSDVNDAEAIKKAKVAAAVARAKAKKAAQQAETNAE
HHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
NGLNQTATPAVDSAANVQAVDSTASAETAVNAVATDIEVSITDVSINDAEAIKKAKVAAA
CCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHH
VARAKAKKIAAASTESKTDAEIESVDDIQTEANVASPSIAATLDTAATEADAVLPSVGST
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHCCCCCCC
AEPIETAPLSSDELKKARIAATIAKAKAKKAALAQEANASSDSSVTND
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 4Fe-4S clusters [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA