| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875186
Identifier: 160875186
GI number: 160875186
Start: 2465671
End: 2466516
Strand: Direct
Name: 160875186
Synonym: Sbal195_2072
Alternate gene names: NA
Gene position: 2465671-2466516 (Clockwise)
Preceding gene: 160875185
Following gene: 160875187
Centisome position: 46.11
GC content: 44.44
Gene sequence:
>846_bases ATGAAACTTAAGATCATAACCAGCGGCATAATCTCACTTGCAATGCTTTCACTCAGTGGCTGCAGCGCTTTTTTTAACGG TAATACCACAGATAAAAAGGCGGTATCGAGTAGCTTAGTCGAATACTTATATCCAGATGAGAAGAGCCGCCAAGCCCAGC AGCCATCCTTACCTGTGCTGCGTTTGCCTATTACTGTCGGCATTGCTTTTTTACCTTCATCCCATTGGCAAGCCGATGCC ATAGACAGTCGCGCCCAAGTCGCTTTGCTCAACAAGGTGAAACAATCCTTTATTAAATACGATTATATCGATCGTATTGA AATCATTCCGAGCACCTATCTTAAAAATGGCAAAGGCTTTAATACCTTACAGCAAGTTGCCCGCCTGCATGACGTCGATG TGATGGCGCTGGTATCTTACGATCAATTGATGCAAAGCCACGAGAACAAATCCGCCATCCTTTATTGGACTATCGTGGGC ATGTATTTAATCCCCGGCAATGAGAATGCAATCCAAACCTTTGTCGATACTGCGGTGTTCGATATGCGCAGCCAAAAGAT GTTATTTAGGGCGCCGGGCATAAATCAGTTAACTGAAAGTTCAACCGCTGTTGGCGTGACAACAACTTTAAGGGAGAAAT CCTATGAGGGTTTTGATCTTGCGGTGAACGATATGATAGTCAATTTAGACGATGAGCTCGCCCGCTTTAAAACACGGGTT AAAGAAGAGCAGGTTGCCACCATAGAACATAAACAAGGTTACAGCGGCGGTGGCAGTTTATCGCTATTAATCCTTTCTAT ACTGGGAATATTTGCGCTGCGCCGTTTAACGATTTGCCGTGAATAA
Upstream 100 bases:
>100_bases GTTTTAACTGTAATGAGTGGATAAGGTAGCCAGCAATATCCGCTAGCAATAAATTCAGTAGCATCATTAGCGGCAGTGTA GGGATACGGTAGGGAAACAG
Downstream 100 bases:
>100_bases ATAATTAAGCGCCAATTAAGATCGTTAAGGATGAGCAAATTGAGGTTTGCTTTGAATCAAGACGTGGGCAAAAAGTATAT AAAGTTGAGCACAGGCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKLKIITSGIISLAMLSLSGCSAFFNGNTTDKKAVSSSLVEYLYPDEKSRQAQQPSLPVLRLPITVGIAFLPSSHWQADA IDSRAQVALLNKVKQSFIKYDYIDRIEIIPSTYLKNGKGFNTLQQVARLHDVDVMALVSYDQLMQSHENKSAILYWTIVG MYLIPGNENAIQTFVDTAVFDMRSQKMLFRAPGINQLTESSTAVGVTTTLREKSYEGFDLAVNDMIVNLDDELARFKTRV KEEQVATIEHKQGYSGGGSLSLLILSILGIFALRRLTICRE
Sequences:
>Translated_281_residues MKLKIITSGIISLAMLSLSGCSAFFNGNTTDKKAVSSSLVEYLYPDEKSRQAQQPSLPVLRLPITVGIAFLPSSHWQADA IDSRAQVALLNKVKQSFIKYDYIDRIEIIPSTYLKNGKGFNTLQQVARLHDVDVMALVSYDQLMQSHENKSAILYWTIVG MYLIPGNENAIQTFVDTAVFDMRSQKMLFRAPGINQLTESSTAVGVTTTLREKSYEGFDLAVNDMIVNLDDELARFKTRV KEEQVATIEHKQGYSGGGSLSLLILSILGIFALRRLTICRE >Mature_281_residues MKLKIITSGIISLAMLSLSGCSAFFNGNTTDKKAVSSSLVEYLYPDEKSRQAQQPSLPVLRLPITVGIAFLPSSHWQADA IDSRAQVALLNKVKQSFIKYDYIDRIEIIPSTYLKNGKGFNTLQQVARLHDVDVMALVSYDQLMQSHENKSAILYWTIVG MYLIPGNENAIQTFVDTAVFDMRSQKMLFRAPGINQLTESSTAVGVTTTLREKSYEGFDLAVNDMIVNLDDELARFKTRV KEEQVATIEHKQGYSGGGSLSLLILSILGIFALRRLTICRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31311; Mature: 31311
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKIITSGIISLAMLSLSGCSAFFNGNTTDKKAVSSSLVEYLYPDEKSRQAQQPSLPVL CEEEEEHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCEE RLPITVGIAFLPSSHWQADAIDSRAQVALLNKVKQSFIKYDYIDRIEIIPSTYLKNGKGF EEHHHEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCH NTLQQVARLHDVDVMALVSYDQLMQSHENKSAILYWTIVGMYLIPGNENAIQTFVDTAVF HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHH DMRSQKMLFRAPGINQLTESSTAVGVTTTLREKSYEGFDLAVNDMIVNLDDELARFKTRV HHHCCHHEEECCCCCHHHCCCCEEEEEEHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHH KEEQVATIEHKQGYSGGGSLSLLILSILGIFALRRLTICRE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLKIITSGIISLAMLSLSGCSAFFNGNTTDKKAVSSSLVEYLYPDEKSRQAQQPSLPVL CEEEEEHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCEE RLPITVGIAFLPSSHWQADAIDSRAQVALLNKVKQSFIKYDYIDRIEIIPSTYLKNGKGF EEHHHEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCH NTLQQVARLHDVDVMALVSYDQLMQSHENKSAILYWTIVGMYLIPGNENAIQTFVDTAVF HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHH DMRSQKMLFRAPGINQLTESSTAVGVTTTLREKSYEGFDLAVNDMIVNLDDELARFKTRV HHHCCHHEEECCCCCHHHCCCCEEEEEEHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHH KEEQVATIEHKQGYSGGGSLSLLILSILGIFALRRLTICRE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA