| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875183
Identifier: 160875183
GI number: 160875183
Start: 2463174
End: 2464049
Strand: Reverse
Name: 160875183
Synonym: Sbal195_2069
Alternate gene names: NA
Gene position: 2464049-2463174 (Counterclockwise)
Preceding gene: 160875184
Following gene: 160875181
Centisome position: 46.08
GC content: 46.58
Gene sequence:
>876_bases ATGCTACTCGACACTTTTTTATCAACCACTACTGAGCGTTTTGTAGTGATACAAGGTGAAAACCTGCGACCCAAGGAGCA TTCTTTGCGTACCATTCCCACATTATTAGTGAGCTTAACTGCCCTCACCCAAAGTATGTTTGCCATAGCCGCGCCGACGC CGCTCACGCCGCAGACGGCTGAATACCAAGTCAACTATGGGGATATCGAACTCGGTAAAGCCAAATACACGCTGCCCAAT CCAGAAGATGGGGTTTATAAGTATCGTTTTGACAGCGACCTTAGCCTGTTATTGTTAACCGATGTGCGCCACATCTTGAG TGAATTTACTCAAGAAAATAGTCAACTCAGCCCTTTGCGTTACTTACAGCAGCGCCAAGGTGTCGGCCCGAATTACACAG AGCAAACCGCATTCGCCAAAGCGCAGGGCTTTATTCATACCCGTTATAAAGACGAGAAAGGTAAATTCCCCTATGAAGGC GAGATTTTCGATCCGCTAATGGTGCAATTGCAATTCAGGCTCGATATGGCAGCGGGCAAAGAAGCGCTCGACTACAAGAT GGTCAAAGACAACGAACTGGATGAATACAAGTTCCATGTGATTGGCAGAGAGCGGATGAACATCGACAGTGGCAGTTACG ACACAGTCAAAATTGAAGTGGTGCGTGACAATAAAAAGCGCCAAACCTTCTTCTGGATGGCACCGGATTTAGCCTACCTG CCCGTGCGGTTAACACATTTTGAAAAAGGCAGTAAGCAGCTGGATATTAAGTTACTTAAATATCACTTCGATGAAGTTGT GAGCCAAGAAAGCAAGCCGGCAGATATTGCTGAGCAACCGCAAGTACCAAAACTGCTAGGTACGACAGAAGGTTAA
Upstream 100 bases:
>100_bases GCTATTTACAGAAGTGTCGGCCTCGGCTATAACCTGCTAACCGTCGATTCCGATTTTTGATTTACGCTGAACTGATTTAC CCTGAACTGTGTAAGTAAGC
Downstream 100 bases:
>100_bases CTGGCAAAGCATTGAGTTAAGTTAAGCAAATCAACTTAGCTCAATGATACTCAGCCTTAGCTGAACTCACACCGATAAAA CCAAACCGAAGTTATACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MLLDTFLSTTTERFVVIQGENLRPKEHSLRTIPTLLVSLTALTQSMFAIAAPTPLTPQTAEYQVNYGDIELGKAKYTLPN PEDGVYKYRFDSDLSLLLLTDVRHILSEFTQENSQLSPLRYLQQRQGVGPNYTEQTAFAKAQGFIHTRYKDEKGKFPYEG EIFDPLMVQLQFRLDMAAGKEALDYKMVKDNELDEYKFHVIGRERMNIDSGSYDTVKIEVVRDNKKRQTFFWMAPDLAYL PVRLTHFEKGSKQLDIKLLKYHFDEVVSQESKPADIAEQPQVPKLLGTTEG
Sequences:
>Translated_291_residues MLLDTFLSTTTERFVVIQGENLRPKEHSLRTIPTLLVSLTALTQSMFAIAAPTPLTPQTAEYQVNYGDIELGKAKYTLPN PEDGVYKYRFDSDLSLLLLTDVRHILSEFTQENSQLSPLRYLQQRQGVGPNYTEQTAFAKAQGFIHTRYKDEKGKFPYEG EIFDPLMVQLQFRLDMAAGKEALDYKMVKDNELDEYKFHVIGRERMNIDSGSYDTVKIEVVRDNKKRQTFFWMAPDLAYL PVRLTHFEKGSKQLDIKLLKYHFDEVVSQESKPADIAEQPQVPKLLGTTEG >Mature_291_residues MLLDTFLSTTTERFVVIQGENLRPKEHSLRTIPTLLVSLTALTQSMFAIAAPTPLTPQTAEYQVNYGDIELGKAKYTLPN PEDGVYKYRFDSDLSLLLLTDVRHILSEFTQENSQLSPLRYLQQRQGVGPNYTEQTAFAKAQGFIHTRYKDEKGKFPYEG EIFDPLMVQLQFRLDMAAGKEALDYKMVKDNELDEYKFHVIGRERMNIDSGSYDTVKIEVVRDNKKRQTFFWMAPDLAYL PVRLTHFEKGSKQLDIKLLKYHFDEVVSQESKPADIAEQPQVPKLLGTTEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33444; Mature: 33444
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLDTFLSTTTERFVVIQGENLRPKEHSLRTIPTLLVSLTALTQSMFAIAAPTPLTPQTA CCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC EYQVNYGDIELGKAKYTLPNPEDGVYKYRFDSDLSLLLLTDVRHILSEFTQENSQLSPLR EEEEECCCEEECCEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCHHH YLQQRQGVGPNYTEQTAFAKAQGFIHTRYKDEKGKFPYEGEIFDPLMVQLQFRLDMAAGK HHHHHCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHEEEEEEEEHHCCC EALDYKMVKDNELDEYKFHVIGRERMNIDSGSYDTVKIEVVRDNKKRQTFFWMAPDLAYL HHHEEEEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEE PVRLTHFEKGSKQLDIKLLKYHFDEVVSQESKPADIAEQPQVPKLLGTTEG CEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCC >Mature Secondary Structure MLLDTFLSTTTERFVVIQGENLRPKEHSLRTIPTLLVSLTALTQSMFAIAAPTPLTPQTA CCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC EYQVNYGDIELGKAKYTLPNPEDGVYKYRFDSDLSLLLLTDVRHILSEFTQENSQLSPLR EEEEECCCEEECCEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCHHH YLQQRQGVGPNYTEQTAFAKAQGFIHTRYKDEKGKFPYEGEIFDPLMVQLQFRLDMAAGK HHHHHCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHEEEEEEEEHHCCC EALDYKMVKDNELDEYKFHVIGRERMNIDSGSYDTVKIEVVRDNKKRQTFFWMAPDLAYL HHHEEEEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEE PVRLTHFEKGSKQLDIKLLKYHFDEVVSQESKPADIAEQPQVPKLLGTTEG CEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA