| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875152
Identifier: 160875152
GI number: 160875152
Start: 2418911
End: 2419675
Strand: Reverse
Name: 160875152
Synonym: Sbal195_2038
Alternate gene names: NA
Gene position: 2419675-2418911 (Counterclockwise)
Preceding gene: 160875160
Following gene: 160875147
Centisome position: 45.25
GC content: 36.6
Gene sequence:
>765_bases ATGATGACTCCAAAGTTTCTGTTAGATAATATTTCAACAATTCGTGTGAATGATAATACTCAATTTAAAATACAACGCCC ATATTACACATTTACACAATATTCTGTGATTGAAGATATTTTGAATAAATGCCCAAATGGTGAAATTAATCGTGGAATAG TCACAGATTTTTTTAAACGTGGAGAGCATGTTCATGGTTTTTTTGCGGCAATGATTTGGGGAGGGATCTCAACCGGAGGA CCTACTGGAAATAATTTGTCTCTGTTGTTATCTGTCGAGCCTGAAATATTGCAGAAACACATAGCGGTAGTGGGTGAGTA TGTTAAACACAACAAGTTTTCAGGCGCTTATCATTATATGAACGGTGCTGGTAAGCTCAAAGGATTGGGCGACTCATTTT TTACTAAATTGTTTTTCTTCCTGGGTAATGCCAATGAGCAAGAAATTATTCCTCCAATTTTCGATAAATGGACAAAGTTA GCCTATGCAGCGCTCTTGGCTGATAGTGAAGACGATAAGATATTTCATCGATATATATCATCAGTAAAAGGAGTAGATGT CAGATTCCGTACAGCTTATCAAGGAGATGCATACAATGATTATGTTGTTAAGATGAACTGTTGGGCCAAGAATTGTGGAG TTAGTGTCAGCGATTTGGAACAATTTATTTTTGGTTGCAACAGAAAACAAGATCCTTCGGCGTCGAATCCAAGAATGATT TTTGAGAAGAAGGTCAATGAATTTATGCTTACGGCTATGAGTTAG
Upstream 100 bases:
>100_bases CTTCGATACGCTGAGCCATGCCTTGATAGAGTTGTGCTCGGGAATAAAGCGTAAAAATACTTCTAGAACTCCATAGCGAT AACCAGAGTGAGAGACTGTC
Downstream 100 bases:
>100_bases TCGATAGCTAAAAATTGAATCTTTGTAGGTTTAGATTGATGACTATTTGAAAGATGGAGATAGAGTTATGAAAGAATATA TCGTTACTGGTACCTGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MMTPKFLLDNISTIRVNDNTQFKIQRPYYTFTQYSVIEDILNKCPNGEINRGIVTDFFKRGEHVHGFFAAMIWGGISTGG PTGNNLSLLLSVEPEILQKHIAVVGEYVKHNKFSGAYHYMNGAGKLKGLGDSFFTKLFFFLGNANEQEIIPPIFDKWTKL AYAALLADSEDDKIFHRYISSVKGVDVRFRTAYQGDAYNDYVVKMNCWAKNCGVSVSDLEQFIFGCNRKQDPSASNPRMI FEKKVNEFMLTAMS
Sequences:
>Translated_254_residues MMTPKFLLDNISTIRVNDNTQFKIQRPYYTFTQYSVIEDILNKCPNGEINRGIVTDFFKRGEHVHGFFAAMIWGGISTGG PTGNNLSLLLSVEPEILQKHIAVVGEYVKHNKFSGAYHYMNGAGKLKGLGDSFFTKLFFFLGNANEQEIIPPIFDKWTKL AYAALLADSEDDKIFHRYISSVKGVDVRFRTAYQGDAYNDYVVKMNCWAKNCGVSVSDLEQFIFGCNRKQDPSASNPRMI FEKKVNEFMLTAMS >Mature_254_residues MMTPKFLLDNISTIRVNDNTQFKIQRPYYTFTQYSVIEDILNKCPNGEINRGIVTDFFKRGEHVHGFFAAMIWGGISTGG PTGNNLSLLLSVEPEILQKHIAVVGEYVKHNKFSGAYHYMNGAGKLKGLGDSFFTKLFFFLGNANEQEIIPPIFDKWTKL AYAALLADSEDDKIFHRYISSVKGVDVRFRTAYQGDAYNDYVVKMNCWAKNCGVSVSDLEQFIFGCNRKQDPSASNPRMI FEKKVNEFMLTAMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28828; Mature: 28828
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTPKFLLDNISTIRVNDNTQFKIQRPYYTFTQYSVIEDILNKCPNGEINRGIVTDFFKR CCCHHHHHCCCEEEEECCCCEEEEECCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GEHVHGFFAAMIWGGISTGGPTGNNLSLLLSVEPEILQKHIAVVGEYVKHNKFSGAYHYM CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEE NGAGKLKGLGDSFFTKLFFFLGNANEQEIIPPIFDKWTKLAYAALLADSEDDKIFHRYIS CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SVKGVDVRFRTAYQGDAYNDYVVKMNCWAKNCGVSVSDLEQFIFGCNRKQDPSASNPRMI HCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCH FEKKVNEFMLTAMS HHHHHHHHHHEECC >Mature Secondary Structure MMTPKFLLDNISTIRVNDNTQFKIQRPYYTFTQYSVIEDILNKCPNGEINRGIVTDFFKR CCCHHHHHCCCEEEEECCCCEEEEECCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GEHVHGFFAAMIWGGISTGGPTGNNLSLLLSVEPEILQKHIAVVGEYVKHNKFSGAYHYM CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEE NGAGKLKGLGDSFFTKLFFFLGNANEQEIIPPIFDKWTKLAYAALLADSEDDKIFHRYIS CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SVKGVDVRFRTAYQGDAYNDYVVKMNCWAKNCGVSVSDLEQFIFGCNRKQDPSASNPRMI HCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCH FEKKVNEFMLTAMS HHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA