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The map label for this gene is intA [C]

Identifier: 160875142

GI number: 160875142

Start: 2402083

End: 2403351

Strand: Direct

Name: intA [C]

Synonym: Sbal195_2028

Alternate gene names: 160875142

Gene position: 2402083-2403351 (Clockwise)

Preceding gene: 160875141

Following gene: 160875143

Centisome position: 44.92

GC content: 53.43

Gene sequence:

>1269_bases
ATGGCGCAGATTGTGACAGCAACAGGCGTGGAGCAAGGCAAGTTAAACGATGCAGTATTGCGCCGTTGGTTGCGGGCAGG
GGTAACGCGGGACTTTCGGGATACGCAGTTTCCGGCGGTGCGGTTACGGGCCTCGACCGATAGACGCCAAGCCTCGGTGT
ATTTAGTGATGAACGAGGCGGGCAAAACCGTGTGGCAAAAGCAGGGTGTGTGGCCAGTGATGTGCTTGAAGACCTTTTTA
ACCGAGTTACCCAGTTTGCTCGCCAAACGCAGCATGGGCCAAACGGTCATCAGCAACGAGTTTGCGACCGTCGCGCAATT
ATTGGCGTGGTTTGTCACCCATGTGGAATGCAACCGCACCTTAAGCAATAGCTGGCGCAGTAACTGTAAATCGTTAGTGA
GTAAACATCTCAGCGGCTGCTTTGGTGAGTTACCGCTCAATGAACTGAACTTTATCGCAGTGGACAGTTATTTAATCAAA
CCCATGTTGGCGCAGGGGTATTCGGCCAATTACATCAAAGCGGCGGTGAAAGTGTTAAAGCGGGCGTTATCGGTTGCGGC
CGATTTACGGGTATTAGACGCCAATAGCTTGGCGGGGTATCGGGTGCAAATGAGTTTGAAGATGCCGCCATTGGTGGGCA
CGCAATTAAGCGAGTCGGACGTGGGCCCGTTATTCAGCGCATTGCGGAATGCAGCAAGACCGGTAGCCATGCTGTTCGTG
CTGATGCTGATGTTCGGTACCCGCATAGGTGAAACCCGTTTAGCCAGATGGGACCACTTTGCCGGCGATTATTGGTTTAT
TCCTGCCGAGAATGCCAAGAACCGCCAAGAGCACCGACTGCCGATGACGCCCACAGCCAAAAAGCTGATAACCCATTATG
CCCAGTGGCAATACACGCATGTGGGCAAGCGGGCGTTTTTGTTCCCAGGCGAAGTGGGGCCGGTGAGCATTCGCACTGCG
CAGTATTGGAGTGAGACCATTCGGTTTAAGGCGTTTACCTCCCACGCACTGCGCAAACTGTGCCGCACCATTATTGCCGA
CATGGGGGTAGATACCATGGTGGGTGAGCGGATATTGAATCACACCTTGCCGTTGCTGCTACGTACTTACGTCAACAGCA
CCTTAGATAAGGGCATGTTGATGGCATTAGATGCCTACCATGCGCACTTAATCACACTGGGGTTTGATGATGTGGCGCCC
GAGATTATGCGCCAATCGACCACTGAGCCGAGTGAGCCAGACGAGCCAATGTTAGTGGGGTGGTTATGA

Upstream 100 bases:

>100_bases
AGCGTTAAGTGCGCGGTTTCGGGATATGCCGATGAACCAGCGAGTTAAGCGCATACGCTCGGGTACCCATCACACCTTTG
AATATCGGTTGGAGGGCTAG

Downstream 100 bases:

>100_bases
CGCTAACAATGACAATCACAATTAGCACAACTGGGTTATGGCCTGAGTACAGGGGGATTTATGGCTAATCGCGCCGCGGA
TGTATTGAAAGTAGGGCGCC

Product: integrase family protein

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase Family Protein; Phage Family Integrase

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MAQIVTATGVEQGKLNDAVLRRWLRAGVTRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFL
TELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFGELPLNELNFIAVDSYLIK
PMLAQGYSANYIKAAVKVLKRALSVAADLRVLDANSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAARPVAMLFV
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTHVGKRAFLFPGEVGPVSIRTA
QYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAP
EIMRQSTTEPSEPDEPMLVGWL

Sequences:

>Translated_422_residues
MAQIVTATGVEQGKLNDAVLRRWLRAGVTRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFL
TELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFGELPLNELNFIAVDSYLIK
PMLAQGYSANYIKAAVKVLKRALSVAADLRVLDANSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAARPVAMLFV
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTHVGKRAFLFPGEVGPVSIRTA
QYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAP
EIMRQSTTEPSEPDEPMLVGWL
>Mature_421_residues
AQIVTATGVEQGKLNDAVLRRWLRAGVTRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFLT
ELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFGELPLNELNFIAVDSYLIKP
MLAQGYSANYIKAAVKVLKRALSVAADLRVLDANSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAARPVAMLFVL
MLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTHVGKRAFLFPGEVGPVSIRTAQ
YWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPE
IMRQSTTEPSEPDEPMLVGWL

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47480; Mature: 47349

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIVTATGVEQGKLNDAVLRRWLRAGVTRDFRDTQFPAVRLRASTDRRQASVYLVMNEA
CCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECC
GKTVWQKQGVWPVMCLKTFLTELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRT
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNSWRSNCKSLVSKHLSGCFGELPLNELNFIAVDSYLIKPMLAQGYSANYIKAAVKVLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
RALSVAADLRVLDANSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAARPVAMLFV
HHHHHHHHHEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTH
HHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHC
VGKRAFLFPGEVGPVSIRTAQYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILN
CCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPEIMRQSTTEPSEPDEPMLVG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEE
WL
CC
>Mature Secondary Structure 
AQIVTATGVEQGKLNDAVLRRWLRAGVTRDFRDTQFPAVRLRASTDRRQASVYLVMNEA
CCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECC
GKTVWQKQGVWPVMCLKTFLTELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRT
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNSWRSNCKSLVSKHLSGCFGELPLNELNFIAVDSYLIKPMLAQGYSANYIKAAVKVLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
RALSVAADLRVLDANSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAARPVAMLFV
HHHHHHHHHEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTH
HHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHC
VGKRAFLFPGEVGPVSIRTAQYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILN
CCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPEIMRQSTTEPSEPDEPMLVG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEE
WL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA