| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875089
Identifier: 160875089
GI number: 160875089
Start: 2352948
End: 2353670
Strand: Direct
Name: 160875089
Synonym: Sbal195_1974
Alternate gene names: NA
Gene position: 2352948-2353670 (Clockwise)
Preceding gene: 160875088
Following gene: 160875090
Centisome position: 44.0
GC content: 52.28
Gene sequence:
>723_bases ATGTTTGATCCTGAATGTTTAATTTGTTGTTTGGAGGGCGGCGCCGCGTGTTCGGTACATGGGCAAGTTAGCCGTGATGA TGGGCCCACCGTGGCCGCGCTTACCGAGATGGAAACCGCGCAAGTGACGTTACTCATGATGCAAGCAAAGCAGTTAATGC TTAAGGCGATGGCGCTTAAATCTAAGTCGAACATGCCTAATAGCACTGAGCCTAATGTGGCTGAGCTTAGCGCGGGGACC ACTGAACGGGCCCCGTTAAGTGGCGTGAACATGAGCAAAGACATTGCCTGTTTTCATGGGCATACCACGGCGGAGTTGTT TAGGCGAACGCAGGTGGGCCGAATGGTTGAGGTGTTAAGGAACTGCGATGAATTGCAGCATAGTCGCCCTGAGCGTTTGG CGGTTATCGCGACCGACATAGTGGATAAGGTGTTGTTGGGCAATGGCAAGCAGTTGTTGCTGCCGACGGTGAGCATCGAT TGGATTATGAATTATCTGCTGATGGAAGAACAACGCGCGGAACGTTCTATTGCGCTATTGGCGGAGGATATAGGCGCGGC TGATATGAGTGCGGTTGATATGAGTGCAATAGTGAAAAGCCGCAACGTGCACATTAAACGGCGTGATTTTTTTAGCCAGT TGCGCAGTAACTTGGCGCACGAGGTTTACTTGCTTGGCAGTGAAGGCGAGCGAGCGGAGGGCAACGGGGCGCATTGCAGT TGA
Upstream 100 bases:
>100_bases GTGATAACTGGGCGCGTAAAAAACGCCGTTATCCCGATGCCCGCCACAGTTTGGCGACCGATGCGGGCTTGATACCTAAG ATGAAGTGGGGAGCATAACG
Downstream 100 bases:
>100_bases CCCGTTGCAGTAGACATAAGAAAGCCCGCTGAAGTTTTGGCGACCGATGCGGGCTTAATACCTATACCTAAAGTGAGGCA ATATCATGTTACTGAAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MFDPECLICCLEGGAACSVHGQVSRDDGPTVAALTEMETAQVTLLMMQAKQLMLKAMALKSKSNMPNSTEPNVAELSAGT TERAPLSGVNMSKDIACFHGHTTAELFRRTQVGRMVEVLRNCDELQHSRPERLAVIATDIVDKVLLGNGKQLLLPTVSID WIMNYLLMEEQRAERSIALLAEDIGAADMSAVDMSAIVKSRNVHIKRRDFFSQLRSNLAHEVYLLGSEGERAEGNGAHCS
Sequences:
>Translated_240_residues MFDPECLICCLEGGAACSVHGQVSRDDGPTVAALTEMETAQVTLLMMQAKQLMLKAMALKSKSNMPNSTEPNVAELSAGT TERAPLSGVNMSKDIACFHGHTTAELFRRTQVGRMVEVLRNCDELQHSRPERLAVIATDIVDKVLLGNGKQLLLPTVSID WIMNYLLMEEQRAERSIALLAEDIGAADMSAVDMSAIVKSRNVHIKRRDFFSQLRSNLAHEVYLLGSEGERAEGNGAHCS >Mature_240_residues MFDPECLICCLEGGAACSVHGQVSRDDGPTVAALTEMETAQVTLLMMQAKQLMLKAMALKSKSNMPNSTEPNVAELSAGT TERAPLSGVNMSKDIACFHGHTTAELFRRTQVGRMVEVLRNCDELQHSRPERLAVIATDIVDKVLLGNGKQLLLPTVSID WIMNYLLMEEQRAERSIALLAEDIGAADMSAVDMSAIVKSRNVHIKRRDFFSQLRSNLAHEVYLLGSEGERAEGNGAHCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26245; Mature: 26245
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDPECLICCLEGGAACSVHGQVSRDDGPTVAALTEMETAQVTLLMMQAKQLMLKAMALK CCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHH SKSNMPNSTEPNVAELSAGTTERAPLSGVNMSKDIACFHGHTTAELFRRTQVGRMVEVLR HCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH NCDELQHSRPERLAVIATDIVDKVLLGNGKQLLLPTVSIDWIMNYLLMEEQRAERSIALL HHHHHHHCCCCCEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH AEDIGAADMSAVDMSAIVKSRNVHIKRRDFFSQLRSNLAHEVYLLGSEGERAEGNGAHCS HHHCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MFDPECLICCLEGGAACSVHGQVSRDDGPTVAALTEMETAQVTLLMMQAKQLMLKAMALK CCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHH SKSNMPNSTEPNVAELSAGTTERAPLSGVNMSKDIACFHGHTTAELFRRTQVGRMVEVLR HCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH NCDELQHSRPERLAVIATDIVDKVLLGNGKQLLLPTVSIDWIMNYLLMEEQRAERSIALL HHHHHHHCCCCCEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH AEDIGAADMSAVDMSAIVKSRNVHIKRRDFFSQLRSNLAHEVYLLGSEGERAEGNGAHCS HHHCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA